[ImageJ-builds] Build failed in Jenkins: Synchronize-and-deploy-IJ1 #5078

jenkins at imagej.net jenkins at imagej.net
Sun Jan 12 20:21:40 CST 2014 

See <http://jenkins.imagej.net/job/Synchronize-and-deploy-IJ1/5078/>

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[...truncated 404 lines...]
  inflating: source/ij/plugin/filter/FractalBoxCounter.java  
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+ cd source
+ pwd
+ export GIT_WORK_TREE=/data/devel/jenkins/jobs/Synchronize-and-deploy-IJ1/workspace/tmpCommit/source
+ find ( -name .DS_Store -name .FBCIndex -o -name .FBCLockFolder -o -name .gdb_history ) -exec rm -rf {} ;
find: `./.FBCLockFolder': No such file or directory
+ echo No temporary files removed
No temporary files removed
+ find -type f -print0
+ xargs -0 perl /data/devel/jenkins/jobs/Synchronize-and-deploy-IJ1/workspace/tools/mac2unix.pl
+ find -type f -print0
+ xargs -0 git update-index --add
+ git write-tree
+ tree=958b3029320c40d56d0bc2898fe6a6e8a719b96a
+ export GIT_AUTHOR_NAME=Wayne Rasband
+ export GIT_AUTHOR_EMAIL=wsr at nih.gov
+ echo+    • 1.48p 12 January 2014
      □ Added an "Overlay" option to the Analyze>Tools>Calibration Bar
        dialog box.
      □ Image>Color>Split Channels and Image>Hyperstacks>Reduce
        Dimensionality are faster and preserve slice and frame
        positions.
      □ The Image>Color>Make Composite command no longer displays the
        "Channels" window or resets the slice position.
      □ The Help>Update ImageJ dialog now appends the daily build
        number, if it exists, to the "You are currently running"
        version.
      □ Added a "List thresholds" option to the Process>Binary>Make
        Binary dialog box.
      □ The Image>Color>Merge Channels command no longer attempts to
        auto-fill its dialog unless there are images created by Image>
        Color>Split Channels.
      □ Added a DEBUG option to the ImageJ constructor. For example, a
        Java program can run ImageJ invisibly in debug mode using "new
        ImageJ(ImageJ.NO_SHOW+ImageJ.DEBUG)".
      □ Thanks to Philippe Carl, added the
        GenericDialog.getRadioButtonGroups() method.
      □ Added the TestRoi(String,int,int) constructor as a drop-in
        replacement for the Graphics.drawString() method.
      □ Thanks to Jon Nathan, fixed a bug that caused radio buttons in
        GenericDialogs to not generate dialogItemChanged events (
        example).
      □ Thanks to Ashley Peery, fixed bugs in Image>Color>Merge
        Channels that caused it to not correctly merge more than three
        RGB images and to ignore the "Make composite" option when
        merging RGB images.
      □ Fixed a bug that caused Image>Stacks>Z Project to not correctly
        show progress when processing hyperstacks.
      □ Fixed a bug that caused the getSelectionCoordinates() macro
        function to not work as expected with selections created using
        makeOval().
      □ Thanks to Neil Fazel, fixed a bug that caused File>Import>Text
        Image to skip the first line of the text image if it consisted
        of all NaNs.
      □ Thanks to Tiago Ferreira, fixed a bug that caused the particle
        analyzer to sometimes unexpectedly display the Results table if
        "Stack position" was enabled in Analyze>Set Measurements.
git commit-tree 958b3029320c40d56d0bc2898fe6a6e8a719b96a -p 8e8095f30991a6397314a864743936153ab6929f
+ commit=06928ef850df95b09993c1df65de0947277ef0b7
+ git update-ref refs/heads/imagej 06928ef850df95b09993c1df65de0947277ef0b7
+ cd ../..
+ rm -rf tmpCommit tmpIndex
+ dirname tools/jenkins-job.sh
+ sh -x tools/sync-with-imagej.sh
+ URL=git://github.com/fiji/ImageJA
+ BRANCH=refs/heads/master
+ IJ1BRANCH=refs/heads/imagej
+ test a--wayne = a
+ NEED_TO_UPDATE_WORKING_TREE=
+ git config --bool core.bare
+ test false = true
+ git symbolic-ref HEAD
+ test refs/heads/master != 
+ git fetch git://github.com/fiji/ImageJA refs/heads/master
+ ERROR=From git://github.com/fiji/ImageJA
 * branch            master     -> FETCH_HEAD
+ git rev-parse refs/heads/master
+ HEAD=8b620cc5a34dff7543af3b66fab2d4d34055710c
+ test -z 
+ git push . FETCH_HEAD:refs/heads/master
Everything up-to-date
+ git rev-parse refs/heads/master
+ HEAD=8b620cc5a34dff7543af3b66fab2d4d34055710c
+ git rev-parse refs/heads/imagej
+ IJ1HEAD=06928ef850df95b09993c1df65de0947277ef0b7
+ git merge-base 06928ef850df95b09993c1df65de0947277ef0b7 8b620cc5a34dff7543af3b66fab2d4d34055710c
+ test 06928ef850df95b09993c1df65de0947277ef0b7 != 8e8095f30991a6397314a864743936153ab6929f
+ git log -1 --pretty=format:%s 06928ef850df95b09993c1df65de0947277ef0b7
+ sed -n s/^[^0-9]*\([^ 0-9A-Za-z] \)\?\([1-9][\.0-9]*.\)[^0-9A-Za-z].*$/\2/p
+ VERSION=1.48p
+ git rev-parse --git-dir
+ export GIT_INDEX_FILE=.git/IJ1INDEX
+ git read-tree 06928ef850df95b09993c1df65de0947277ef0b7
+ MAVEN_URL=http://maven.imagej.net/content/repositories/releases
+ POM_SCIJAVA_URL=http://maven.imagej.net/content/repositories/releases/org/scijava/pom-scijava
+ curl -s http://maven.imagej.net/content/repositories/releases/org/scijava/pom-scijava/maven-metadata.xml
+ sed -n s/.*<release>\(.*\)<\/release>.*/\1/p
+ POM_SCIJAVA_VERSION=1.118
+ git show 8b620cc5a34dff7543af3b66fab2d4d34055710c:pom.xml
+ sed -e /^\t</s/\(<version>\).*\(<\/version>\)/\11.48p\2/ -e /<parent>/,/<\/pa/s/\(<version>\)[^<]*/\11.118/
+ git hash-object -w .git/IJ1INDEX.pom.new
+ POMHASH=79907c121384201640275f188433cefae7253d57
+ printf 100644 79907c121384201640275f188433cefae7253d57 0\tpom.xml\n
+ git rev-parse 8b620cc5a34dff7543af3b66fab2d4d34055710c:.gitignore
+ GITIGNORE=beef00d016539f0af7e0cb61be0ef1028cc8db48
+ printf 100644 beef00d016539f0af7e0cb61be0ef1028cc8db48 0\t.gitignore\n
+ git ls-files --stage
+ mv .git/IJ1INDEX .git/IJ1INDEX.old
+ sed -e s~\t\(.*\.java\)$~\tsrc/main/java/\1~ -e s~\tplugins/\(.*\)\.source$~\tsrc/main/java/\1.java~ -e s~\t\(IJ_Props.txt\|macros/\)~\tsrc/main/resources/\1~ -e s~\timages/~\tsrc/main/resources/~ -e s~\t\(MANIFEST.MF\)$~\tsrc/main/resources/META-INF/\1~ -e /\t\(plugins\/.*\.class\|.FBCIndex\|ij\/plugin\/RandomOvals.txt\)$/d
+ git update-index --index-info
+ echo Synchronize with ImageJ 1.48p
+ git write-tree
+ TREE=f8a1762818d2dc5a034066429baa215c7a365728
+ git commit-tree f8a1762818d2dc5a034066429baa215c7a365728 -p 8b620cc5a34dff7543af3b66fab2d4d34055710c -p 06928ef850df95b09993c1df65de0947277ef0b7
+ NEWHEAD=ee381c397f3d4cbc8f3fb956dbb10efe54c46ea4
+ git update-ref -m Synchronize with ImageJ1 refs/heads/master ee381c397f3d4cbc8f3fb956dbb10efe54c46ea4 8b620cc5a34dff7543af3b66fab2d4d34055710c
+ git tag -a -m v1.48p v1.48p ee381c397f3d4cbc8f3fb956dbb10efe54c46ea4
+ test -z 
+ test -n 
+ git push git at dev.imagejdev.org:imageja.git imagej master v1.48p
+ cd tools
+ git push git at dev.imagejdev.org:imageja.git tools
+ ERR=To git at dev.imagejdev.org:imageja.git
   8e8095f..06928ef  imagej -> imagej
   8b620cc..ee381c3  master -> master
 * [new tag]         v1.48p -> v1.48p
Everything up-to-date
+ git push git at github.com:fiji/ImageJA imagej master v1.48p
+ ERR=ERROR: Permission to fiji/ImageJA.git denied to imagej/ImageJA.
fatal: The remote end hung up unexpectedly
+ echo ERROR: Permission to fiji/ImageJA.git denied to imagej/ImageJA.
fatal: The remote end hung up unexpectedlyCould not push
ERROR: Permission to fiji/ImageJA.git denied to imagej/ImageJA.
fatal: The remote end hung up unexpectedlyCould not push
+ exit 1
Build step 'Exécuter un script shell' marked build as failure

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