[ImageJ-builds] Build failed in Jenkins: fiji-full #786

[Jenkins Daemon]

See <https://qa.nest-initiative.org/job/fiji-full/786/changes>

Changes:

[Johannes Schindelin] Remove obsolete updater tests

[Johannes Schindelin] Really bend over for SunOS' sh, and use `` instead of $()

[Johannes Schindelin] Unset CDPATH in the most important shell scripts

[Johannes Schindelin] legacy-imglib1: work around a Bio-Formats method going AWOL

[Johannes Schindelin] Remove some obsolete shell scripts

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using the class path: <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/ops/target/classes>:<https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/core/target/imglib2-2.0.0-SNAPSHOT.jar>
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Compiling 164 files in <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/data>
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Note: imagej.data.operator.OpAnd indexed under org.scijava.plugin.Plugin
Note: imagej.data.operator.OpMultiply indexed under org.scijava.plugin.Plugin
Note: imagej.data.operator.OpTransparentZero indexed under org.scijava.plugin.Plugin
Note: imagej.data.operator.OpDivide indexed under org.scijava.plugin.Plugin
Note: imagej.data.operator.DefaultCalculatorService indexed under org.scijava.plugin.Plugin
Note: imagej.data.operator.OpDifference indexed under org.scijava.plugin.Plugin
Note: imagej.data.operator.OpSubtract indexed under org.scijava.plugin.Plugin
Note: imagej.data.operator.OpAverage indexed under org.scijava.plugin.Plugin
Note: imagej.data.operator.OpXor indexed under org.scijava.plugin.Plugin
Note: imagej.data.operator.OpOr indexed under org.scijava.plugin.Plugin
Note: imagej.data.operator.OpMax indexed under org.scijava.plugin.Plugin
Note: imagej.data.operator.OpAdd indexed under org.scijava.plugin.Plugin
Note: imagej.data.operator.OpCopy indexed under org.scijava.plugin.Plugin
Note: imagej.data.operator.OpMin indexed under org.scijava.plugin.Plugin
Note: imagej.data.threshold.YenThresholdMethod indexed under org.scijava.plugin.Plugin
Note: imagej.data.threshold.TriangleThresholdMethod indexed under org.scijava.plugin.Plugin
Note: imagej.data.threshold.IsoDataThresholdMethod indexed under org.scijava.plugin.Plugin
Note: imagej.data.threshold.MaxEntropyThresholdMethod indexed under org.scijava.plugin.Plugin
Note: imagej.data.threshold.MomentsThresholdMethod indexed under org.scijava.plugin.Plugin
Note: imagej.data.threshold.MinimumThresholdMethod indexed under org.scijava.plugin.Plugin
Note: imagej.data.threshold.MeanThresholdMethod indexed under org.scijava.plugin.Plugin
Note: imagej.data.threshold.OtsuThresholdMethod indexed under org.scijava.plugin.Plugin
Note: imagej.data.threshold.PercentileThresholdMethod indexed under org.scijava.plugin.Plugin
Note: imagej.data.threshold.MaxLikelihoodThresholdMethod indexed under org.scijava.plugin.Plugin
Note: imagej.data.threshold.DefaultThresholdService indexed under org.scijava.plugin.Plugin
Note: imagej.data.threshold.IntermodesThresholdMethod indexed under org.scijava.plugin.Plugin
Note: imagej.data.threshold.LiThresholdMethod indexed under org.scijava.plugin.Plugin
Note: imagej.data.threshold.MinErrorThresholdMethod indexed under org.scijava.plugin.Plugin
Note: imagej.data.threshold.RenyiEntropyThresholdMethod indexed under org.scijava.plugin.Plugin
Note: imagej.data.threshold.ShanbhagThresholdMethod indexed under org.scijava.plugin.Plugin
Note: imagej.data.threshold.HuangThresholdMethod indexed under org.scijava.plugin.Plugin
Note: imagej.data.threshold.DefaultThresholdMethod indexed under org.scijava.plugin.Plugin
Note: imagej.data.sampler.DefaultSamplerService indexed under org.scijava.plugin.Plugin
Note: imagej.data.measure.DefaultMeasurementService indexed under org.scijava.plugin.Plugin
Note: imagej.data.measure.DefaultStatisticsService indexed under org.scijava.plugin.Plugin
Note: imagej.data.table.DefaultTableDisplay indexed under org.scijava.plugin.Plugin
Note: imagej.data.lut.DefaultLUTService indexed under org.scijava.plugin.Plugin
Note: imagej.data.DefaultDatasetService indexed under org.scijava.plugin.Plugin
Note: imagej.data.display.DummyScreenCaptureService indexed under org.scijava.plugin.Plugin
Note: imagej.data.display.DefaultInputService indexed under org.scijava.plugin.Plugin
Note: imagej.data.display.DefaultWindowService indexed under org.scijava.plugin.Plugin
Note: imagej.data.display.ActiveImagePreprocessor indexed under org.scijava.plugin.Plugin
Note: imagej.data.display.DefaultOverlayView indexed under org.scijava.plugin.Plugin
Note: imagej.data.display.DefaultDatasetView indexed under org.scijava.plugin.Plugin
Note: imagej.data.display.DefaultImageDisplay indexed under org.scijava.plugin.Plugin
Note: imagej.data.display.SelectWindow indexed under org.scijava.plugin.Plugin
Note: imagej.data.display.DefaultImageDisplayService indexed under org.scijava.plugin.Plugin
Note: imagej.data.display.DefaultOverlayService indexed under org.scijava.plugin.Plugin
Note: imagej.data.options.OptionsChannels indexed under org.scijava.plugin.Plugin
Note: imagej.data.options.OptionsOverlay indexed under org.scijava.plugin.Plugin
Note: imagej.data.animation.DefaultAnimationService indexed under org.scijava.plugin.Plugin
Note: <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/data/src/main/java/imagej/data/overlay/CompositeOverlay.java> uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Parsing /home/jenkins/.m2/repository/loci/loci-legacy/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/ome-xml/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/scifio/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/jai_imageio/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/loci-legacy/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/lwf-stubs/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/ome-xml/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Trying to download http://code.imagej.net/maven2/releases/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata.xml.sha1
java.io.FileNotFoundException: http://code.imagej.net/maven2/releases/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata.xml.sha1
	at sun.net.www.protocol.http.HttpURLConnection.getInputStream(HttpURLConnection.java:1434)
	at imagej.build.minimaven.BuildEnvironment.download(BuildEnvironment.java:493)
	at imagej.build.minimaven.BuildEnvironment.downloadAndVerify(BuildEnvironment.java:378)
	at imagej.build.minimaven.BuildEnvironment.downloadAndVerify(BuildEnvironment.java:336)
	at imagej.build.minimaven.MavenProject.download(MavenProject.java:169)
	at imagej.build.minimaven.MavenProject.maybeDownloadAutomatically(MavenProject.java:994)
	at imagej.build.minimaven.MavenProject.getDependencies(MavenProject.java:737)
	at imagej.build.minimaven.MavenProject.getDependencies(MavenProject.java:755)
	at imagej.build.minimaven.MavenProject.getDependencies(MavenProject.java:755)
	at imagej.build.minimaven.MavenProject.getDependencies(MavenProject.java:712)
	at imagej.build.minimaven.MavenProject.checkUpToDate(MavenProject.java:196)
	at imagej.build.minimaven.MavenProject.upToDate(MavenProject.java:181)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:397)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:375)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:398)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:375)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:398)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:332)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:327)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:327)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:289)
	at imagej.build.MiniMaven.main(MiniMaven.java:138)
Trying to download http://code.imagej.net/maven2/snapshots/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata.xml.sha1
Downloading http://code.imagej.net/maven2/snapshots/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata.xml.sha1 to /home/jenkins/.m2/repository/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata-snapshot.xml.sha1
Trying to download http://code.imagej.net/maven2/snapshots/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata.xml
Checking for new snapshot of turbojpeg
Downloading http://code.imagej.net/maven2/snapshots/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata.xml to /home/jenkins/.m2/repository/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/org/scijava/native-lib-loader/2.0-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
ij-io not up-to-date because of ij-core
Parsing /home/jenkins/.m2/repository/loci/loci-legacy/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/ome-xml/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/scifio/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/jai_imageio/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/loci-legacy/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/lwf-stubs/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/ome-xml/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/org/scijava/native-lib-loader/2.0-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
ij-options not up-to-date because of ij-core
Compiling 18 files in <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/options>
[-source, 1.5, -target, 1.5, -classpath, <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/options/target/classes>:/home/jenkins/.m2/repository/org/bushe/eventbus/1.4/eventbus-1.4.jar:<https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/core/target/ij-core-2.0.0-SNAPSHOT.jar>:/home/jenkins/.m2/repository/org/scijava/scijava-common/1.4.0/scijava-common-1.4.0.jar:/home/jenkins/.m2/repository/net/java/sezpoz/sezpoz/1.9-imagej/sezpoz-1.9-imagej.jar, -d, <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/options/target/classes,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/options/src/main/java/imagej/core/options/OptionsLineWidth.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/options/src/main/java/imagej/core/options/OptionsConversions.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/options/src/main/java/imagej/core/options/OptionsRoundedRectangleTool.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/options/src/main/java/imagej/core/options/OptionsAppearance.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/options/src/main/java/imagej/core/options/OptionsProxy.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/options/src/main/java/imagej/core/options/OptionsMemoryAndThreads.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/options/src/main/java/imagej/core/options/OptionsCompiler.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/options/src/main/java/imagej/core/options/OptionsProfilePlot.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/options/src/main/java/imagej/core/options/OptionsWandTool.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/options/src/main/java/imagej/core/options/OptionsPointTool.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/options/src/main/java/imagej/core/options/OptionsReset.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/options/src/main/java/imagej/core/options/OptionsArrowTool.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/options/src/main/java/imagej/core/options/OptionsScript.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/options/src/main/java/imagej/core/options/OptionsDicom.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/options/src/main/java/imagej/core/options/OptionsCompatibility.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/options/src/main/java/imagej/core/options/OptionsMisc.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/options/src/main/java/imagej/core/options/OptionsInputOutput.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/options/src/main/java/imagej/core/options/OptionsFont.java]>
using the class path: <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/options/target/classes>:/home/jenkins/.m2/repository/org/bushe/eventbus/1.4/eventbus-1.4.jar:<https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/core/target/ij-core-2.0.0-SNAPSHOT.jar>:/home/jenkins/.m2/repository/org/scijava/scijava-common/1.4.0/scijava-common-1.4.0.jar:/home/jenkins/.m2/repository/net/java/sezpoz/sezpoz/1.9-imagej/sezpoz-1.9-imagej.jar
Note: imagej.core.options.OptionsLineWidth indexed under org.scijava.plugin.Plugin
Note: imagej.core.options.OptionsConversions indexed under org.scijava.plugin.Plugin
Note: imagej.core.options.OptionsRoundedRectangleTool indexed under org.scijava.plugin.Plugin
Note: imagej.core.options.OptionsAppearance indexed under org.scijava.plugin.Plugin
Note: imagej.core.options.OptionsProxy indexed under org.scijava.plugin.Plugin
Note: imagej.core.options.OptionsMemoryAndThreads indexed under org.scijava.plugin.Plugin
Note: imagej.core.options.OptionsCompiler indexed under org.scijava.plugin.Plugin
Note: imagej.core.options.OptionsProfilePlot indexed under org.scijava.plugin.Plugin
Note: imagej.core.options.OptionsWandTool indexed under org.scijava.plugin.Plugin
Note: imagej.core.options.OptionsPointTool indexed under org.scijava.plugin.Plugin
Note: imagej.core.options.OptionsReset indexed under org.scijava.plugin.Plugin
Note: imagej.core.options.OptionsArrowTool indexed under org.scijava.plugin.Plugin
Note: imagej.core.options.OptionsScript indexed under org.scijava.plugin.Plugin
Note: imagej.core.options.OptionsDicom indexed under org.scijava.plugin.Plugin
Note: imagej.core.options.OptionsCompatibility indexed under org.scijava.plugin.Plugin
Note: imagej.core.options.OptionsMisc indexed under org.scijava.plugin.Plugin
Note: imagej.core.options.OptionsInputOutput indexed under org.scijava.plugin.Plugin
Note: imagej.core.options.OptionsFont indexed under org.scijava.plugin.Plugin
ij-ui not up-to-date because of ij-core
Compiling 44 files in <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui>
[-source, 1.5, -target, 1.5, -classpath, <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/target/classes>:/home/jenkins/.m2/repository/org/bushe/eventbus/1.4/eventbus-1.4.jar:<https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/core/target/ij-core-2.0.0-SNAPSHOT.jar>:<https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/data/target/ij-data-2.0.0-SNAPSHOT.jar>:<https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/options/target/ij-options-2.0.0-SNAPSHOT.jar>:<https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/updater/target/ij-updater-core-2.0.0-SNAPSHOT.jar>:<https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/core/target/imglib2-2.0.0-SNAPSHOT.jar>:<https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/algorithms/core/target/imglib2-algorithms-2.0.0-SNAPSHOT.jar>:<https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/ops/target/imglib2-ops-2.0.0-SNAPSHOT.jar>:/home/jenkins/.m2/repository/org/scijava/scijava-common/1.4.0/scijava-common-1.4.0.jar:/home/jenkins/.m2/repository/net/java/sezpoz/sezpoz/1.9-imagej/sezpoz-1.9-imagej.jar, -d, <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/target/classes,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/Desktop.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/ShowReadme.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/ApplicationFrame.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/DialogPrompt.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/AbstractUserInterface.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/FilePreprocessor.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/UserInterface.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/ToolBar.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/dnd/DefaultDragAndDropData.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/dnd/DragAndDropService.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/dnd/ListDragAndDropHandler.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/dnd/ScriptFileDragAndDropHandler.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/dnd/DragAndDropHandler.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/dnd/DefaultDragAndDropService.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/dnd/AbstractDragAndDropData.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/dnd/MIMEType.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/dnd/LUTFileDragAndDropHandler.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/dnd/event/DragAndDropEvent.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/dnd/event/DragOverEvent.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/dnd/event/DragExitEvent.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/dnd/event/DropEvent.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/dnd/event/DragEnterEvent.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/dnd/DragAndDropData.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/dnd/AbstractDragAndDropHandler.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/Arrangeable.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/AbstractInputHarvesterPlugin.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/UIPreprocessor.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/viewer/DisplayViewer.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/viewer/table/TableDisplayPanel.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/viewer/table/AbstractTableDisplayViewer.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/viewer/table/TableDisplayViewer.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/viewer/DisplayPanel.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/viewer/AbstractDisplayViewer.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/viewer/text/TextDisplayPanel.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/viewer/text/TextDisplayViewer.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/viewer/text/AbstractTextDisplayViewer.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/viewer/DisplayWindow.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/viewer/image/ImageDisplayPanel.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/viewer/image/AbstractImageDisplayViewer.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/viewer/image/ImageDisplayViewer.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/DefaultUIService.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/StatusBar.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/UIService.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/src/main/java/imagej/ui/SystemClipboard.java]>
using the class path: <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/ui/target/classes>:/home/jenkins/.m2/repository/org/bushe/eventbus/1.4/eventbus-1.4.jar:<https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/core/target/ij-core-2.0.0-SNAPSHOT.jar>:<https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/data/target/ij-data-2.0.0-SNAPSHOT.jar>:<https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/options/target/ij-options-2.0.0-SNAPSHOT.jar>:<https://qa.nest-initiative.org/job/fiji-full/ws/modules/imagej2/core/updater/target/ij-updater-core-2.0.0-SNAPSHOT.jar>:<https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/core/target/imglib2-2.0.0-SNAPSHOT.jar>:<https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/algorithms/core/target/imglib2-algorithms-2.0.0-SNAPSHOT.jar>:<https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/ops/target/imglib2-ops-2.0.0-SNAPSHOT.jar>:/home/jenkins/.m2/repository/org/scijava/scijava-common/1.4.0/scijava-common-1.4.0.jar:/home/jenkins/.m2/repository/net/java/sezpoz/sezpoz/1.9-imagej/sezpoz-1.9-imagej.jar
Note: imagej.ui.ShowReadme indexed under org.scijava.plugin.Plugin
Note: imagej.ui.FilePreprocessor indexed under org.scijava.plugin.Plugin
Note: imagej.ui.dnd.ListDragAndDropHandler indexed under org.scijava.plugin.Plugin
Note: imagej.ui.dnd.ScriptFileDragAndDropHandler indexed under org.scijava.plugin.Plugin
Note: imagej.ui.dnd.DefaultDragAndDropService indexed under org.scijava.plugin.Plugin
Note: imagej.ui.dnd.LUTFileDragAndDropHandler indexed under org.scijava.plugin.Plugin
Note: imagej.ui.UIPreprocessor indexed under org.scijava.plugin.Plugin
Note: imagej.ui.DefaultUIService indexed under org.scijava.plugin.Plugin
Parsing /home/jenkins/.m2/repository/loci/loci-legacy/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/ome-xml/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/scifio/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/jai_imageio/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/loci-legacy/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/lwf-stubs/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/ome-xml/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/org/scijava/native-lib-loader/2.0-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
imglib2-io not up-to-date because of imglib2
Parsing /home/jenkins/.m2/repository/loci/loci-legacy/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/ome-xml/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/scifio/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/jai_imageio/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/loci-legacy/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/lwf-stubs/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/ome-xml/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/org/scijava/native-lib-loader/2.0-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/loci-legacy/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/ome-xml/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/scifio/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/jai_imageio/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/loci-legacy/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/lwf-stubs/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/ome-xml/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/org/scijava/native-lib-loader/2.0-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /home/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Compiling 10 files in <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/io>
[-source, 1.5, -target, 1.5, -classpath, <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/io/target/classes>:/home/jenkins/.m2/repository/org/ow2/asm/asm/4.0/asm-4.0.jar:/home/jenkins/.m2/repository/javax/ejb/ejb-api/3.0/ejb-api-3.0.jar:/home/jenkins/.m2/repository/com/jgoodies/forms/1.2.1/forms-1.2.1.jar:<https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/core/target/imglib2-2.0.0-SNAPSHOT.jar>:/home/jenkins/.m2/repository/loci/jai_imageio/4.5-SNAPSHOT/jai_imageio-4.5-20130524.103213-167.jar:/home/jenkins/.m2/repository/com/esotericsoftware/kryo/kryo/2.21/kryo-2.21-shaded.jar:/home/jenkins/.m2/repository/loci/loci-legacy/4.5-SNAPSHOT/loci-legacy-4.5-20130524.103305-160.jar:/home/jenkins/.m2/repository/loci/lwf-stubs/4.5-SNAPSHOT/lwf-stubs-4.5-20130524.103348-165.jar:/home/jenkins/.m2/repository/com/esotericsoftware/minlog/minlog/1.2/minlog-1.2.jar:/home/jenkins/.m2/repository/org/scijava/native-lib-loader/2.0-SNAPSHOT/native-lib-loader-2.0-20130319.202138-7.jar:/home/jenkins/.m2/repository/org/objenesis/objenesis/1.2/objenesis-1.2.jar:/home/jenkins/.m2/repository/loci/ome-xml/4.5-SNAPSHOT/ome-xml-4.5-20130524.103431-164.jar:/home/jenkins/.m2/repository/org/perf4j/perf4j/0.9.13/perf4j-0.9.13.jar:/home/jenkins/.m2/repository/com/esotericsoftware/reflectasm/reflectasm/1.07/reflectasm-1.07-shaded.jar:/home/jenkins/.m2/repository/loci/scifio/4.5-SNAPSHOT/scifio-4.5-20130524.103533-163.jar:/home/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/scifio-devel-4.5-20130524.103248-160.jar:/home/jenkins/.m2/repository/javax/servlet/servlet-api/2.4/servlet-api-2.4.jar:/home/jenkins/.m2/repository/org/slf4j/slf4j-api/1.5.10/slf4j-api-1.5.10.jar:/home/jenkins/.m2/repository/loci/turbojpeg/4.5-SNAPSHOT/turbojpeg-4.5-20130524.103448-42.jar, -d, <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/io/target/classes,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/io/src/main/java/net/imglib2/io/ImgOpener.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/io/src/main/java/net/imglib2/io/img/virtual/VirtualPlaneLoader.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/io/src/main/java/net/imglib2/io/img/virtual/VirtualAccessor.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/io/src/main/java/net/imglib2/io/img/virtual/VirtualCursor.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/io/src/main/java/net/imglib2/io/img/virtual/VirtualImgFactory.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/io/src/main/java/net/imglib2/io/img/virtual/VirtualRandomAccess.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/io/src/main/java/net/imglib2/io/img/virtual/VirtualImg.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/io/src/main/java/net/imglib2/io/ImgSaver.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/io/src/main/java/net/imglib2/io/ImgIOException.java,> <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/io/src/main/java/net/imglib2/io/ImgIOUtils.java]>
using the class path: <https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/io/target/classes>:/home/jenkins/.m2/repository/org/ow2/asm/asm/4.0/asm-4.0.jar:/home/jenkins/.m2/repository/javax/ejb/ejb-api/3.0/ejb-api-3.0.jar:/home/jenkins/.m2/repository/com/jgoodies/forms/1.2.1/forms-1.2.1.jar:<https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/core/target/imglib2-2.0.0-SNAPSHOT.jar>:/home/jenkins/.m2/repository/loci/jai_imageio/4.5-SNAPSHOT/jai_imageio-4.5-20130524.103213-167.jar:/home/jenkins/.m2/repository/com/esotericsoftware/kryo/kryo/2.21/kryo-2.21-shaded.jar:/home/jenkins/.m2/repository/loci/loci-legacy/4.5-SNAPSHOT/loci-legacy-4.5-20130524.103305-160.jar:/home/jenkins/.m2/repository/loci/lwf-stubs/4.5-SNAPSHOT/lwf-stubs-4.5-20130524.103348-165.jar:/home/jenkins/.m2/repository/com/esotericsoftware/minlog/minlog/1.2/minlog-1.2.jar:/home/jenkins/.m2/repository/org/scijava/native-lib-loader/2.0-SNAPSHOT/native-lib-loader-2.0-20130319.202138-7.jar:/home/jenkins/.m2/repository/org/objenesis/objenesis/1.2/objenesis-1.2.jar:/home/jenkins/.m2/repository/loci/ome-xml/4.5-SNAPSHOT/ome-xml-4.5-20130524.103431-164.jar:/home/jenkins/.m2/repository/org/perf4j/perf4j/0.9.13/perf4j-0.9.13.jar:/home/jenkins/.m2/repository/com/esotericsoftware/reflectasm/reflectasm/1.07/reflectasm-1.07-shaded.jar:/home/jenkins/.m2/repository/loci/scifio/4.5-SNAPSHOT/scifio-4.5-20130524.103533-163.jar:/home/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/scifio-devel-4.5-20130524.103248-160.jar:/home/jenkins/.m2/repository/javax/servlet/servlet-api/2.4/servlet-api-2.4.jar:/home/jenkins/.m2/repository/org/slf4j/slf4j-api/1.5.10/slf4j-api-1.5.10.jar:/home/jenkins/.m2/repository/loci/turbojpeg/4.5-SNAPSHOT/turbojpeg-4.5-20130524.103448-42.jar
<https://qa.nest-initiative.org/job/fiji-full/ws/modules/imglib/io/src/main/java/net/imglib2/io/ImgSaver.java>:593: cannot find symbol
symbol  : method createOMEXMLMetadata()
location: class loci.formats.MetadataTools
		final IMetadata store = MetadataTools.createOMEXMLMetadata();
		                                     ^
1 error
Exception in thread "main" imagej.build.minimaven.JavaCompiler$CompileError: Compile error: 1
	at imagej.build.minimaven.JavaCompiler.call(JavaCompiler.java:83)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:444)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:375)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:398)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:375)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:398)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:375)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:398)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:375)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:398)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:332)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:327)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:327)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:289)
	at imagej.build.MiniMaven.main(MiniMaven.java:138)
Build step 'Execute shell' marked build as failure