[ImageJ-builds] Build failed in Jenkins: Fiji-daily #736

[jenkins at imagej.net]

See <http://jenkins.imagej.net/job/Fiji-daily/736/changes>

Changes:

[Stephan Preibisch] Fixed bug in apply external transformation

[Stephan Preibisch] can process images sequentially

[Stephan Preibisch] It is now possible to set a different offset for the registration

[Stephan Preibisch] fixed bug for deconvolution with one block and GPU

[Stephan Preibisch] fixed bug so that any filenames work

[Stephan Preibisch] can load images sequentially for deconvolution

[Stephan Preibisch] added interface for predeconvolution fusion

[Stephan Preibisch] removing minima by copying ... removing entries from arraylist is very inefficient

[Stephan Preibisch] Takes size of extracted PSF from Multi_View_Deconvolution class

[Stephan Preibisch] Enable to set min/max of images by hand

[Stephan Preibisch] Removed debug outputs

[Ignacio Arganda-Carreras] Trainable Weka Segmentation: update main GUI titles and author e-mail.

[Ignacio Arganda-Carreras] Trainable Weka Segmentation: create merged plugin and deprecate old ones.

[Stephan Preibisch] Deconvolution can subtract a background before computation

[Curtis Rueden] Add Glow Over/Under LUT

[Jenkins] Bump to pom-scijava 1.42

------------------------------------------
[...truncated 971 lines...]
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:327)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:327)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:289)
	at imagej.build.MiniMaven.main(MiniMaven.java:138)
Trying to download http://code.imagej.net/maven2/snapshots/loci/ome-xml/4.5-SNAPSHOT/maven-metadata.xml.sha1
Downloading http://code.imagej.net/maven2/snapshots/loci/ome-xml/4.5-SNAPSHOT/maven-metadata.xml.sha1 to /data/devel/jenkins/.m2/repository/loci/ome-xml/4.5-SNAPSHOT/maven-metadata-snapshot.xml.sha1
Trying to download http://code.imagej.net/maven2/snapshots/loci/ome-xml/4.5-SNAPSHOT/maven-metadata.xml
Checking for new snapshot of ome-xml
Downloading http://code.imagej.net/maven2/snapshots/loci/ome-xml/4.5-SNAPSHOT/maven-metadata.xml to /data/devel/jenkins/.m2/repository/loci/ome-xml/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/turbojpeg/4.5-SNAPSHOT/turbojpeg-4.5-20130514.083349-34.pom
Trying to download http://code.imagej.net/maven2/releases/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata.xml.sha1
java.io.FileNotFoundException: http://code.imagej.net/maven2/releases/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata.xml.sha1
	at sun.net.www.protocol.http.HttpURLConnection.getInputStream(HttpURLConnection.java:1434)
	at imagej.build.minimaven.BuildEnvironment.download(BuildEnvironment.java:493)
	at imagej.build.minimaven.BuildEnvironment.downloadAndVerify(BuildEnvironment.java:378)
	at imagej.build.minimaven.BuildEnvironment.downloadAndVerify(BuildEnvironment.java:336)
	at imagej.build.minimaven.MavenProject.download(MavenProject.java:169)
	at imagej.build.minimaven.MavenProject.maybeDownloadAutomatically(MavenProject.java:994)
	at imagej.build.minimaven.MavenProject.getDependencies(MavenProject.java:737)
	at imagej.build.minimaven.MavenProject.getDependencies(MavenProject.java:755)
	at imagej.build.minimaven.MavenProject.getDependencies(MavenProject.java:755)
	at imagej.build.minimaven.MavenProject.getDependencies(MavenProject.java:712)
	at imagej.build.minimaven.MavenProject.checkUpToDate(MavenProject.java:196)
	at imagej.build.minimaven.MavenProject.upToDate(MavenProject.java:181)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:390)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:332)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:327)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:327)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:289)
	at imagej.build.MiniMaven.main(MiniMaven.java:138)
Trying to download http://code.imagej.net/maven2/snapshots/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata.xml.sha1
Downloading http://code.imagej.net/maven2/snapshots/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata.xml.sha1 to /data/devel/jenkins/.m2/repository/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata-snapshot.xml.sha1
Trying to download http://code.imagej.net/maven2/snapshots/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata.xml
Checking for new snapshot of turbojpeg
Downloading http://code.imagej.net/maven2/snapshots/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata.xml to /data/devel/jenkins/.m2/repository/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/org/scijava/native-lib-loader/2.0-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/org/scijava/native-lib-loader/2.0-SNAPSHOT/native-lib-loader-2.0-20130319.202138-7.pom
Trying to download http://code.imagej.net/maven2/releases/org/scijava/native-lib-loader/2.0-SNAPSHOT/maven-metadata.xml.sha1
java.io.FileNotFoundException: http://code.imagej.net/maven2/releases/org/scijava/native-lib-loader/2.0-SNAPSHOT/maven-metadata.xml.sha1
	at sun.net.www.protocol.http.HttpURLConnection.getInputStream(HttpURLConnection.java:1434)
	at imagej.build.minimaven.BuildEnvironment.download(BuildEnvironment.java:493)
	at imagej.build.minimaven.BuildEnvironment.downloadAndVerify(BuildEnvironment.java:378)
	at imagej.build.minimaven.BuildEnvironment.downloadAndVerify(BuildEnvironment.java:336)
	at imagej.build.minimaven.MavenProject.download(MavenProject.java:169)
	at imagej.build.minimaven.MavenProject.maybeDownloadAutomatically(MavenProject.java:994)
	at imagej.build.minimaven.MavenProject.getDependencies(MavenProject.java:737)
	at imagej.build.minimaven.MavenProject.getDependencies(MavenProject.java:755)
	at imagej.build.minimaven.MavenProject.getDependencies(MavenProject.java:755)
	at imagej.build.minimaven.MavenProject.getDependencies(MavenProject.java:712)
	at imagej.build.minimaven.MavenProject.checkUpToDate(MavenProject.java:196)
	at imagej.build.minimaven.MavenProject.upToDate(MavenProject.java:181)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:390)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:332)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:327)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:327)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:289)
	at imagej.build.MiniMaven.main(MiniMaven.java:138)
Trying to download http://code.imagej.net/maven2/snapshots/org/scijava/native-lib-loader/2.0-SNAPSHOT/maven-metadata.xml.sha1
Downloading http://code.imagej.net/maven2/snapshots/org/scijava/native-lib-loader/2.0-SNAPSHOT/maven-metadata.xml.sha1 to /data/devel/jenkins/.m2/repository/org/scijava/native-lib-loader/2.0-SNAPSHOT/maven-metadata-snapshot.xml.sha1
Trying to download http://code.imagej.net/maven2/snapshots/org/scijava/native-lib-loader/2.0-SNAPSHOT/maven-metadata.xml
Checking for new snapshot of native-lib-loader
Downloading http://code.imagej.net/maven2/snapshots/org/scijava/native-lib-loader/2.0-SNAPSHOT/maven-metadata.xml to /data/devel/jenkins/.m2/repository/org/scijava/native-lib-loader/2.0-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/com/jgoodies/forms/1.2.1/forms-1.2.1.pom
Parsing /data/devel/jenkins/.m2/repository/org/perf4j/perf4j/0.9.13/perf4j-0.9.13.pom
Parsing /data/devel/jenkins/.m2/repository/javax/servlet/servlet-api/2.4/servlet-api-2.4.pom
Parsing /data/devel/jenkins/.m2/repository/javax/ejb/ejb-api/3.0/ejb-api-3.0.pom
Parsing /data/devel/jenkins/.m2/repository/edu/mines/mines-jtk/20100113/mines-jtk-20100113.pom
Parsing /data/devel/jenkins/.m2/repository/org/jfree/jcommon/1.0.17/jcommon-1.0.17.pom
Parsing /data/devel/jenkins/.m2/repository/org/jfree/jfreechart/1.0.14/jfreechart-1.0.14.pom
Parsing /data/devel/jenkins/.m2/repository/javax/servlet/servlet-api/2.5/servlet-api-2.5.pom
Parsing /data/devel/jenkins/.m2/repository/com/lowagie/itext/2.1.5/itext-2.1.5.pom
Parsing /data/devel/jenkins/.m2/repository/bouncycastle/bcmail-jdk14/138/bcmail-jdk14-138.pom
Parsing /data/devel/jenkins/.m2/repository/bouncycastle/bcprov-jdk14/138/bcprov-jdk14-138.pom
Parsing /data/devel/jenkins/.m2/repository/java3d/vecmath/1.5.2/vecmath-1.5.2.pom
Parsing /data/devel/jenkins/.m2/repository/java3d/j3d-core/1.5.2/j3d-core-1.5.2.pom
Parsing /data/devel/jenkins/.m2/repository/java3d/j3d-core-utils/1.5.2/j3d-core-utils-1.5.2.pom
Parsing /data/devel/jenkins/.m2/repository/loci/scifio/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/jai_imageio/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/loci-legacy/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/lwf-stubs/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/ome-xml/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/org/scijava/native-lib-loader/2.0-SNAPSHOT/maven-metadata-snapshot.xml
fiji-lib not up-to-date because 26 source files are not up-to-date (/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/JNI.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/statistics/RoiStatistics.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/tool/ToolWithOptions.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/tool/AbstractTrackingTool.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/tool/AbstractTool.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/tool/SliceListener.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/tool/SliceObserver.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/tool/ToolToggleListener.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/debugging/Object_Inspector.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/Debug.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/DoubleArray.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/MenuItemDiverter.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/ArrayBase.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/MenuItemHelper.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/IntArray.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/FloatArray.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/SplitString.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/TicToc.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/Levenshtein.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/gui/JImagePanel.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/gui/AbstractAnnotation.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/gui/GenericDialogPlus.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/gui/CommandFinderBase.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/gui/JFrameCommandFinder.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/gui/OverlayedImageCanvas.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/ij/gui/ShapeRoiHelper.java)
VIB-lib not up-to-date because of fiji-lib
3D_Viewer not up-to-date because of VIB-lib
3D_Blob_Segmentation not up-to-date because of 3D_Viewer
Parsing /data/devel/jenkins/.m2/repository/loci/scifio/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/jai_imageio/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/loci-legacy/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/lwf-stubs/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/ome-xml/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/org/scijava/native-lib-loader/2.0-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/scifio/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/jai_imageio/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/loci-legacy/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/lwf-stubs/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/ome-xml/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/org/scijava/native-lib-loader/2.0-SNAPSHOT/maven-metadata-snapshot.xml
Compiling 26 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib
[-source, 1.5, -target, 1.5, -classpath, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/target/classes:/data/devel/jenkins/.m2/repository/com/apple/AppleJavaExtensions/1.5/AppleJavaExtensions-1.5.jar:/data/devel/jenkins/.m2/repository/net/imagej/ij/1.47q/ij-1.47q.jar:/data/devel/jenkins/jobs/Fiji-daily/workspace/java/linux-amd64/jdk1.6.0_24/jre/../lib/tools.jar, -d, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/target/classes, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/JNI.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/statistics/RoiStatistics.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/tool/ToolWithOptions.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/tool/AbstractTrackingTool.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/tool/AbstractTool.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/tool/SliceListener.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/tool/SliceObserver.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/tool/ToolToggleListener.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/debugging/Object_Inspector.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/Debug.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/DoubleArray.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/MenuItemDiverter.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/ArrayBase.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/MenuItemHelper.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/IntArray.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/FloatArray.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/SplitString.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/TicToc.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/Levenshtein.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/gui/JImagePanel.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/gui/AbstractAnnotation.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/gui/GenericDialogPlus.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/gui/CommandFinderBase.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/gui/JFrameCommandFinder.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/fiji/util/gui/OverlayedImageCanvas.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/src/main/java/ij/gui/ShapeRoiHelper.java]
using the class path: /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/target/classes:/data/devel/jenkins/.m2/repository/com/apple/AppleJavaExtensions/1.5/AppleJavaExtensions-1.5.jar:/data/devel/jenkins/.m2/repository/net/imagej/ij/1.47q/ij-1.47q.jar:/data/devel/jenkins/jobs/Fiji-daily/workspace/java/linux-amd64/jdk1.6.0_24/jre/../lib/tools.jar
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
pal-optimization not up-to-date because 22 source files are not up-to-date (/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/UnivariateMinimum.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/MultivariateFunction.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/MFWithGradient.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/MersenneTwisterFast.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/OrthogonalLineFunction.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/UnivariateFunction.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/ConjugateDirectionSearch.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/MachineAccuracy.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/ErrorFunction.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/GeneralizedDEOptimizer.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/Binomial.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/LineFunction.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/OrthogonalSearch.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/BoundsCheckedFunction.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/MultivariateMinimum.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/NumericalDerivative.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/ConjugateGradientSearch.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/DifferentialEvolution.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/MathUtils.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/UrnModel.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/GammaFunction.java/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/StochasticOSearch.java)
Compiling 22 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization
[-source, 1.5, -target, 1.5, -classpath, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/target/classes, -d, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/target/classes, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/UnivariateMinimum.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/MultivariateFunction.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/MFWithGradient.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/MersenneTwisterFast.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/OrthogonalLineFunction.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/UnivariateFunction.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/ConjugateDirectionSearch.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/MachineAccuracy.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/ErrorFunction.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/GeneralizedDEOptimizer.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/Binomial.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/LineFunction.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/OrthogonalSearch.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/BoundsCheckedFunction.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/MultivariateMinimum.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/NumericalDerivative.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/ConjugateGradientSearch.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/DifferentialEvolution.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/MathUtils.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/UrnModel.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/GammaFunction.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/src/main/java/pal/math/StochasticOSearch.java]
using the class path: /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/target/classes
Compiling 190 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib
[-source, 1.5, -target, 1.5, -classpath, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/target/classes:/data/devel/jenkins/.m2/repository/com/apple/AppleJavaExtensions/1.5/AppleJavaExtensions-1.5.jar:/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/target/fiji-lib-2.0.0-SNAPSHOT.jar:/data/devel/jenkins/.m2/repository/net/imagej/ij/1.47q/ij-1.47q.jar:/data/devel/jenkins/.m2/repository/jama/jama/1.0.2/jama-1.0.2.jar:/data/devel/jenkins/.m2/repository/junit/junit/4.8.1/junit-4.8.1.jar:/data/devel/jenkins/.m2/repository/com/jcraft/jzlib/1.0.7/jzlib-1.0.7.jar:/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/target/pal-optimization-2.0.0-SNAPSHOT.jar:/data/devel/jenkins/jobs/Fiji-daily/workspace/java/linux-amd64/jdk1.6.0_24/jre/../lib/tools.jar, -d, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/target/classes, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/javax/media/j3d/RenderingErrorListener.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/javax/media/j3d/RenderingError.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/inference/BinBoundariesInference.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/inference/BEPBInference.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/inference/BEPBBinBoundariesInference.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/inference/InferenceCaller.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/inference/BinClassificationInference.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/inference/Inference.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/inference/ModelInference.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/inference/LogFuncs.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/inference/BEPBModelInference.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/inference/BinBoundariesComputation.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/inference/DistributionInference.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/inference/MAPInference.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/color/CIELAB.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/features/SurfacenessProcessor.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/features/ComputeCurvatures.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/features/SigmaPalette.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/features/GaussianGenerationCallback.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/features/HessianEvalueProcessor.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/features/TubenessProcessor.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/nrrd/NrrdHeader.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/nrrd/NrrdInfo.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/distance/Correlation.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/distance/MutualInformation.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/distance/TestEuclidean.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/distance/Thresholded.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/distance/TestMutualInformation.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/distance/BaseOfTests.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/distance/TestCorrelation.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/distance/Euclidean.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/distance/TwoValues.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/distance/PixelPairs.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/amira/AmiraMeshEncoder.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/amira/AmiraTable.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/amira/AmiraMeshDecoder.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/amira/AmiraTableEncoder.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/amira/AmiraParameters.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/events/RoiListener.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/events/RoiEvent.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/events/SliceEvent.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/events/RoiWatcher.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/events/SliceWatcher.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/events/SliceListener.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/video/VideoStack.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/stacks/ThreePanesCanvas.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/stacks/PaneOwner.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/stacks/ThreePaneCrop.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/stacks/ThreePanes.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/stacks/ThreePaneCropCanvas.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/stacks/ThreePaneContainer.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/math3d/Eigensystem2x2Float.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/math3d/Bookstein.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/math3d/JacobiDouble.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/math3d/NormalEstimator.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/math3d/Eigensystem3x3Float.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/math3d/Triangle.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/math3d/FastMatrixN.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/math3d/Eigensystem3x3Double.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/math3d/Plane.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/math3d/JacobiFloat.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/math3d/Line.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/math3d/Point3d.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/math3d/Tetrahedron.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/math3d/FloatMatrixN.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/math3d/TransformIO.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/math3d/TestEigenvalueDecompositions.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/math3d/Eigensystem2x2Double.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/client/ArchiveClient.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/DiffusionInterpol2.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/FloatMatrix.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/BinaryInterpolator.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/NaiveResampler.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/SegmentationViewerCanvas.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/RigidRegistration.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/BilateralFilter.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/FastMatrix.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/MaxEntHistogram.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/transforms/BooksteinTransform.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/transforms/Threshold.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/transforms/Transform.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/transforms/FastMatrixTransform.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/transforms/OrderedTransformations.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/transforms/BoundsInclusive.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/segment/SegmentationEditor.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/segment/InfoPanel.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/segment/Thresholder.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/segment/CustomStackWindow.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/segment/Sidebar.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/segment/MaterialList.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/segment/CustomCanvas.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/segment/ImageButton.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/segment/Border.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/TestRigidRegistration.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/TransformedImage.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/app/Options.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/app/FileGroup.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/app/module/SplitChannels.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/app/module/Resample.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/app/module/TissueStatistics.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/app/module/GreyTransformation.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/app/module/AverageBrain.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/app/module/Show.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/app/module/LabelCenterTransformation.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/app/module/ResampleLabels.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/app/module/LabelDiffusionTransformation.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/app/module/TransformImages.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/app/module/CenterTransformation.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/app/module/State.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/app/module/ModuleListener.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/app/module/Label.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/app/module/Module.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/app/module/EndModule.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/app/ImageMetaData.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/app/gui/Console.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/app/gui/FileGroupDialog.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/app/gui/ProgressIndicator.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/BenesNamedPoint.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/InterpolatedImage.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/PointList.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/edge/CircleIterators.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/edge/SphereIterators.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/VIB.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/ElasticTransformedImage.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/RegistrationOptimizer.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/oldregistration/RegistrationAlgorithm.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/TestFastMatrix.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/vib/ShowHistogram.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/util/XMLFunctions.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/util/TestPenalty.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/util/BatchOpener.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/util/RGBToLuminance.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/util/ImageCalculatorRevised.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/util/CombinationGenerator.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/util/opencsv/CSVWriter.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/util/opencsv/CSVReader.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/util/TestFindConnectedRegions.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/util/ModelessQuestions.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/util/Arrow.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/util/FindConnectedRegions.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/util/Penalty.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/util/FileCreation.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/util/OverlayRegistered.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/util/CMTKTransformation.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/util/StupidLog.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/util/RohlfingSBA.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/util/Limits.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/util/ArrowDisplayer.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/util/FileAndChannel.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/util/WindowHelpers.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/util/Bresenham3D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/util/LabelFilenameFilter.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/oldsegmenters/Utils.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/oldsegmenters/LabelBinaryOps.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/oldsegmenters/AutoLabellerNaive.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/oldsegmenters/AutoLabeller.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/oldsegmenters/SegmentatorModel.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/landmarks/TransformationAttempt.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/landmarks/TestLoading.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/landmarks/ProgressCanvas.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/landmarks/BooksteinFromLandmarks.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/landmarks/RegistrationResult.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/landmarks/NamedPointWorld.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/landmarks/FineTuneProgressListener.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/landmarks/ProgressWindow.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/landmarks/RigidFromLandmarks.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/landmarks/NamePoints.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/landmarks/AffineFromLandmarks.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/landmarks/FineTuneThread.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/landmarks/NamedPointSet.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/process3d/MinMaxMedian.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/process3d/Smooth.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/process3d/Rebin.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/process3d/Gradient.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/process3d/FindMinima.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/process3d/DistanceTransform3D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/process3d/Convolve3d.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/leica/LeicaSPReader.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/adt/PixelStats.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/adt/Connectivity2D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/adt/Sparse3DByteArray.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/adt/ByteProbability.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/adt/Byte3DArray.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/adt/Unsparse3DByteArray.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/adt/Points.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/gui/GuiBuilder.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/delaunay/Pnt.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/delaunay/Triangulation.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/delaunay/Simplex.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/src/main/java/delaunay/DelaunayTriangulation.java]
using the class path: /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/VIB-lib/target/classes:/data/devel/jenkins/.m2/repository/com/apple/AppleJavaExtensions/1.5/AppleJavaExtensions-1.5.jar:/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-lib/target/fiji-lib-2.0.0-SNAPSHOT.jar:/data/devel/jenkins/.m2/repository/net/imagej/ij/1.47q/ij-1.47q.jar:/data/devel/jenkins/.m2/repository/jama/jama/1.0.2/jama-1.0.2.jar:/data/devel/jenkins/.m2/repository/junit/junit/4.8.1/junit-4.8.1.jar:/data/devel/jenkins/.m2/repository/com/jcraft/jzlib/1.0.7/jzlib-1.0.7.jar:/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/pal-optimization/target/pal-optimization-2.0.0-SNAPSHOT.jar:/data/devel/jenkins/jobs/Fiji-daily/workspace/java/linux-amd64/jdk1.6.0_24/jre/../lib/tools.jar
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
imglib2 not up-to-date because 355 source files are not up-to-date (/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/AbstractLocalizableInt.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/RealPoint.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/interpolation/neighborsearch/InverseDistanceWeightingInterpolatorFactory.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/interpolation/neighborsearch/InverseDistanceWeightingInterpolator.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/interpolation/neighborsearch/NearestNeighborInterpolator.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/interpolation/neighborsearch/NearestNeighborInterpolatorFactory.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/interpolation/InterpolatorFactory.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/interpolation/Interpolant.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/interpolation/randomaccess/NLinearInterpolator3D.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/interpolation/randomaccess/NLinearInterpolator.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/interpolation/randomaccess/NLinearInterpolatorFactory.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/interpolation/randomaccess/LanczosInterpolator.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/interpolation/randomaccess/LanczosInterpolatorFactory.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/interpolation/randomaccess/NearestNeighborInterpolator.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/interpolation/randomaccess/NLinearInterpolator1D.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/interpolation/randomaccess/NLinearInterpolator2D.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/interpolation/randomaccess/NearestNeighborInterpolatorFactory.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/RealCursor.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/IterableInterval.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/view/MixedTransformView.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/view/TransformRandomAccess.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/view/SlicingRandomAccess.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/view/IterableRandomAccessibleInterval.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/view/RandomAccessibleIntervalCursor.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/view/TranslationRandomAccess.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/view/TransformView.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/view/HyperSliceImgPlus.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/view/FullSourceMapMixedRandomAccess.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/view/TransformedRandomAccessible.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/view/Views.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/view/IntervalView.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/view/TransformBuilder.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/view/MixedRandomAccess.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/Pair.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/RandomAccess.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/Binning.java/data/devel/jenkin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ibratedSpace.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/meta/ImageMetadata.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/AbstractCursor.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/converter/TypeIdentity.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/converter/AbstractConvertedIterableRandomAccessibleInterval.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/converter/AbstractConvertedRandomAccess.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/converter/Converter.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/converter/AbstractConvertedCursor.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/converter/AbstractConvertedIterableInterval.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/converter/read/ConvertedRandomAccess.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/converter/read/ConvertedIterableInterval.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/converter/read/ConvertedRandomAccessibleInterval.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/converter/read/ConvertedCursor.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/converter/read/ConvertedRandomAccessible.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/converter/Converters.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/converter/readwrite/WriteConvertedRandomAccess.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/converter/readwrite/RealDoubleSamplerConverter.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/converter/readwrite/WriteConvertedIterableRandomAccessibleInterval.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/converter/readwrite/SamplerConverter.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/converter/readwrite/WriteConvertedRandomAccessible.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/converter/readwrite/WriteConvertedIterableInterval.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/converter/readwrite/WriteConvertedCursor.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/converter/readwrite/WriteConvertedRandomAccessibleInterval.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/converter/readwrite/RealFloatSamplerConverter.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/converter/AbstractConvertedRandomAccessible.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/AbstractWrappedInterval.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/concatenate/Concatenable.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/concatenate/PreConcatenable.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/concatenate/Util.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/Cursor.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/roi/AbstractIterableRegionOfInterest.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/roi/AbstractRegionOfInterest.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/roi/AngleRegionOfInterest.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/roi/BinaryMaskRegionOfInterest.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/roi/RegionOfInterest.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/roi/PolygonRegionOfInterest.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/roi/C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Transform.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/transform/integer/ComponentMapping.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/transform/integer/Translation.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/RealRandomAccess.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/util/LinAlgHelpers.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/util/BenchmarkHelper.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/util/RealSum.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/util/ValuePair.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/util/ImgUtil.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/util/Intervals.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/util/Util.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/util/DevUtil.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/util/KthElement.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/util/Partition.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/util/Triple.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/util/IntervalIndexer.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/RealLocalizable.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/AbstractWrappedRealInterval.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/IterableIntervalSubset.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/sampler/special/OrthoSliceCursor.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/sampler/special/ConstantRandomAccessible.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/sampler/special/ConstantRealRandomAccessible.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/AbstractRealInterval.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/RandomAccessible.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/NativeType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/AbstractNativeType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/BasePairType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/label/BasePairCharType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/label/BasePairBitType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/logic/BitType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/BooleanType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/IntegerType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/real/FloatType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/real/DoubleType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/real/AbstractRealType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/ComplexType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/complex/ComplexFloatType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/complex/AbstractComplexType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/complex/ComplexDoubleType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/ExponentialMathType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/NumericType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/RealType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/integer/UnsignedIntType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/integer/ShortType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/integer/UnsignedByteType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/integer/LongType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/integer/IntType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/integer/UnsignedShortType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/integer/GenericIntType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/integer/Unsigned12BitType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/integer/GenericShortType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/integer/GenericByteType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/integer/ByteType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/integer/AbstractIntegerType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/ARGBType.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/Type.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/AbstractLocalizable.java)
Compiling 355 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core
[-source, 1.5, -target, 1.5, -classpath, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/target/classes, -d, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/target/classes, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/AbstractLocalizableInt.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/RealPoint.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/interpolation/neighborsearch/InverseDistanceWeightingInterpolatorFactory.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/interpolation/neighborsearch/InverseDistanceWeightingInterpolator.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/interpolation/neighborsearch/NearestNeighborInterpolator.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/interpolation/neighborsearch/NearestNeighborInterpolatorFactory.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/interpolation/InterpolatorFactory.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/interpolation/Interpolant.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/interpolation/randomaccess/NLinearInterpolator3D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/interpolation/randomaccess/NLinearInterpolator.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/interpolation/randomaccess/NLinearInterpolatorFactory.java, 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/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/AbstractEuclideanSpace.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/AbstractLocalizingCursorInt.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/multithreading/Chunk.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/multithreading/Stopable.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/multithreading/SimpleMultiThreading.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/RealPositionable.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/position/transform/RealPositionableRoundPositionable.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/position/transform/FloorOffset.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/position/transform/AbstractPositionableTransform.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/position/transform/Floor.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/position/transform/Round.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/position/transform/RealPositionableFloorPositionable.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/RealRandomAccessibleRealInterval.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/ExtendedRealRandomAccessibleRealInterval.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/IterableRealInterval.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/Localizable.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/FinalRealInterval.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/transform/Transformable.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/transform/InvertibleTransform.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/transform/InverseTransform.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/transform/Transform.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/transform/integer/SlicingTransform.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/transform/integer/ComponentMappingTransform.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/transform/integer/TranslationTransform.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/transform/integer/BoundingBox.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/transform/integer/SequentializeTransform.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/transform/integer/MixedTransform.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/transform/integer/AbstractMixedTransform.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/transform/integer/Slicing.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/transform/integer/Mixed.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/transform/integer/BoundingBoxTransform.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/transform/integer/ComponentMapping.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/transform/integer/Translation.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/RealRandomAccess.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/util/LinAlgHelpers.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/util/BenchmarkHelper.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/util/RealSum.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/util/ValuePair.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/util/ImgUtil.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/util/Intervals.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/util/Util.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/util/DevUtil.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/util/KthElement.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/util/Partition.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/util/Triple.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/util/IntervalIndexer.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/RealLocalizable.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/AbstractWrappedRealInterval.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/IterableIntervalSubset.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/sampler/special/OrthoSliceCursor.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/sampler/special/ConstantRandomAccessible.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/sampler/special/ConstantRealRandomAccessible.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/AbstractRealInterval.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/RandomAccessible.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/NativeType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/AbstractNativeType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/BasePairType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/label/BasePairCharType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/label/BasePairBitType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/logic/BitType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/BooleanType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/IntegerType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/real/FloatType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/real/DoubleType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/real/AbstractRealType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/ComplexType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/complex/ComplexFloatType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/complex/AbstractComplexType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/complex/ComplexDoubleType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/ExponentialMathType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/NumericType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/RealType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/integer/UnsignedIntType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/integer/ShortType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/integer/UnsignedByteType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/integer/LongType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/integer/IntType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/integer/UnsignedShortType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/integer/GenericIntType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/integer/Unsigned12BitType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/integer/GenericShortType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/integer/GenericByteType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/integer/ByteType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/integer/AbstractIntegerType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/numeric/ARGBType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/type/Type.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/src/main/java/net/imglib2/AbstractLocalizable.java]
using the class path: /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/target/classes
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
imglib2-algorithms not up-to-date because of imglib2
Compiling 89 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core
[-source, 1.5, -target, 1.5, -classpath, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/target/classes:/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/target/imglib2-2.0.0-SNAPSHOT.jar, -d, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/target/classes, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/stats/Min.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/stats/HistogramBinMapper.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/stats/RealBinMapper.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/stats/Normalize.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/stats/Max.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/stats/Histogram.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/stats/IntBinMapper.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/stats/ComputeMinMax.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/floydsteinberg/FloydSteinbergDithering.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/function/NormMinMax.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/function/SubtractNorm.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/function/SubtractNormReal.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/function/Function.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/function/SubtractReal.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/gauss/AbstractGauss.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/gauss/GaussNativeType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/gauss/GaussDouble.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/gauss/Gauss.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/gauss/SamplingLineIterator.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/gauss/GaussGeneral.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/gauss/AbstractLineIterator.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/gauss/GaussFloat.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/gauss/WritableLineIterator.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/integral/IntegralImgDouble.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/integral/IntegralImg.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/integral/IntegralImgLong.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/integral/ScaleAreaAveraging2d.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/MultiThreadedAlgorithm.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/OutputAlgorithm.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/Algorithm.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/region/localneighborhood/RectangleNeighborhoodSkipCenter.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/region/localneighborhood/HyperSphereNeighborhoodFactory.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/region/localneighborhood/HyperSphereShape.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/region/localneighborhood/HyperSphereNeighborhoodRandomAccess.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/region/localneighborhood/RectangleNeighborhoodLocalizableSampler.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/region/localneighborhood/HypersphereNeighborhoodLocalizableSampler.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/region/localneighborhood/Shape.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/region/localneighborhood/old/LocalNeighborhood.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/region/localneighborhood/old/LocalNeighborhood2.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/region/localneighborhood/old/LocalNeighborhoodCursor.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/region/localneighborhood/old/LocalNeighborhoodCursor2.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/region/localneighborhood/RectangleNeighborhoodRandomAccess.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/region/localneighborhood/RectangleNeighborhood.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/region/localneighborhood/HyperSphereNeighborhoodUnsafe.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/region/localneighborhood/HyperSphereNeighborhood.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/region/localneighborhood/RectangleNeighborhoodSkipCenterUnsafe.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/region/localneighborhood/HyperSphereNeighborhoodCursor.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/region/localneighborhood/RectangleNeighborhoodCursor.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/region/localneighborhood/RectangleShape.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/region/localneighborhood/RectangleNeighborhoodFactory.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/region/localneighborhood/Neighborhood.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/region/localneighborhood/RectangleNeighborhoodUnsafe.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/region/hypersphere/HyperSphere.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/region/hypersphere/HyperSphereCursor.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/labeling/Watershed.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/labeling/AllConnectedComponents.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/gradient/PartialDerivative.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/gauss3/DoubleConvolverRealTypeBuffered.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/gauss3/ConvolverNumericType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/gauss3/SeparableSymmetricConvolution.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/gauss3/ConvolverNativeTypeBuffered.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/gauss3/FloatConvolverRealTypeBuffered.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/gauss3/FloatConvolverRealType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/gauss3/ConvolverFactory.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/gauss3/DoubleConvolverRealType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/gauss3/Gauss3.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/gauss3/ConvolverNativeType.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/componenttree/Component.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/componenttree/ComponentTree.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/componenttree/pixellist/PixelListComponent.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/componenttree/pixellist/PixelList.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/componenttree/pixellist/PixelListComponentGenerator.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/componenttree/pixellist/PixelListComponentTree.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/componenttree/pixellist/PixelListComponentIntermediate.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/componenttree/mser/ComputeDeltaDarkToBright.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/componenttree/mser/MserComponentIntermediate.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/componenttree/mser/MserEvaluationNode.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/componenttree/mser/MserTree.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/componenttree/mser/MserComponentGenerator.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/componenttree/mser/ComputeDelta.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/componenttree/mser/ComputeDeltaBrightToDark.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/componenttree/mser/Mser.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/BenchmarkAlgorithm.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/Benchmark.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/edge/Edgel.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/edge/SubpixelEdgelDetection.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/MultiThreadedBenchmarkAlgorithm.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/kdtree/VolumetricSearch.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/MultiThreaded.java]
using the class path: /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/target/classes:/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/target/imglib2-2.0.0-SNAPSHOT.jar
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/src/main/java/net/imglib2/algorithm/gauss/Gauss.java uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
imglib2-ij not up-to-date because of imglib2
Compiling 15 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/ij
[-source, 1.5, -target, 1.5, -classpath, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/ij/target/classes:/data/devel/jenkins/.m2/repository/com/apple/AppleJavaExtensions/1.5/AppleJavaExtensions-1.5.jar:/data/devel/jenkins/.m2/repository/net/imagej/ij/1.47q/ij-1.47q.jar:/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/target/imglib2-2.0.0-SNAPSHOT.jar:/data/devel/jenkins/jobs/Fiji-daily/workspace/java/linux-amd64/jdk1.6.0_24/jre/../lib/tools.jar, -d, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/ij/target/classes, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/ij/src/main/java/net/imglib2/img/imageplus/IntImagePlus.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/ij/src/main/java/net/imglib2/img/imageplus/ShortImagePlus.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/ij/src/main/java/net/imglib2/img/imageplus/ByteImagePlus.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/ij/src/main/java/net/imglib2/img/imageplus/FloatImagePlus.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/ij/src/main/java/net/imglib2/img/imageplus/ImagePlusImgFactory.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/ij/src/main/java/net/imglib2/img/imageplus/ImagePlusImg.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/ij/src/main/java/net/imglib2/img/imageplus/ImagePlusImgs.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/ij/src/main/java/net/imglib2/img/display/imagej/ImageJVirtualStack.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/ij/src/main/java/net/imglib2/img/display/imagej/ImageJFunctions.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/ij/src/main/java/net/imglib2/img/display/imagej/ImageJVirtualStackFloat.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/ij/src/main/java/net/imglib2/img/display/imagej/ImageJVirtualStackUnsignedShort.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/ij/src/main/java/net/imglib2/img/display/imagej/ImgLib2Display.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/ij/src/main/java/net/imglib2/img/display/imagej/ImageJVirtualStackUnsignedByte.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/ij/src/main/java/net/imglib2/img/display/imagej/ImageJVirtualStackARGB.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/ij/src/main/java/net/imglib2/img/ImagePlusAdapter.java]
using the class path: /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/ij/target/classes:/data/devel/jenkins/.m2/repository/com/apple/AppleJavaExtensions/1.5/AppleJavaExtensions-1.5.jar:/data/devel/jenkins/.m2/repository/net/imagej/ij/1.47q/ij-1.47q.jar:/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/target/imglib2-2.0.0-SNAPSHOT.jar:/data/devel/jenkins/jobs/Fiji-daily/workspace/java/linux-amd64/jdk1.6.0_24/jre/../lib/tools.jar
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Parsing /data/devel/jenkins/.m2/repository/loci/scifio/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/jai_imageio/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/loci-legacy/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/lwf-stubs/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/ome-xml/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/org/scijava/native-lib-loader/2.0-SNAPSHOT/maven-metadata-snapshot.xml
legacy-imglib1 not up-to-date because of imglib2
Parsing /data/devel/jenkins/.m2/repository/loci/scifio/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/jai_imageio/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/loci-legacy/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/lwf-stubs/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/ome-xml/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/org/scijava/native-lib-loader/2.0-SNAPSHOT/maven-metadata-snapshot.xml
mpicbg not up-to-date because 120 source files are not up-to-date (/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/imagefeatures/ImageArrayConverter.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/imagefeatures/FloatArray2DSIFT.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/imagefeatures/FloatArray2DMOPS.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/imagefeatures/FloatArray2DScaleOctave.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/imagefeatures/Feature.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/imagefeatures/FloatArray.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/imagefeatures/Filter.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/imagefeatures/FloatArray2DScaleOctaveDoGDetector.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/imagefeatures/FloatArray2D.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/imagefeatures/FloatArray2DFeatureTransform.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/InvertibleMapping.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/MOPS.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/TransformMeshMapping.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/TransformMapping.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/InteractiveSquarePMCC.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/LongIntegralImage.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/DifferenceOfMean.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/BlockStatistics.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/NormalizeLocalContrast.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/InteractiveStandardDeviation.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/AbstractInteractiveBlockFilter.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/InteractiveDifferenceOfMean.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/InteractiveVariance.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/InteractivePMCC.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/RemoveOutliers.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/InteractiveMean.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/Tilt.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/IntIntegralImage.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/InteractiveScale.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/InteractiveTilt.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/IntegralImage.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/BlockPMCC.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/DoubleIntegralImage.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/LongRGBIntegralImage.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/Mean.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/Scale.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/blockmatching/BlockMatching.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/clahe/ShortApply.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/clahe/FastFlat.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/clahe/FloatApply.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/clahe/RGBApply.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/clahe/Util.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/clahe/FastByteApply.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/clahe/ByteApply.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/clahe/Flat.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/clahe/Apply.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/Mapping.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/stack/Mapping.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/stack/InverseTransformMapping.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/InverseTransformMapping.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/PaintInvertibleCoordinateTransformThread.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/FeatureTransform.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/InverseMapping.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/visualization/PointVis.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/SIFT.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/InteractiveInvertibleCoordinateTransform.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/InteractiveMapping.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/util/Filter.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/util/Util.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/InvertibleTransformMapping.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/MappingThread.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/Boundable.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/AbstractAffineModel1D.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/AbstractAffineModel3D.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/TranslationModel3D.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/InverseCoordinateTransform.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/Spring.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/ElasticMovingLeastSquaresMesh.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/HomographyModel2D.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/AffineModel1D.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/InterpolatedAffineModel3D.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/InvertibleInterpolatedModel.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/InverseCoordinateTransformMap2D.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/InvertibleCoordinateTransformList.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/AbstractMovingLeastSquaresTransform.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/InvertibleBoundable.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/CoordinateTransformList.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/MovingLeastSquaresMesh.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/AffineModel2D.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/TransformList.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/IllDefinedDataPointsException.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/ErrorStatistic.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/CoordinateTransformMap2D.java/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicb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Compiling 120 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg
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/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/InteractiveMean.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/Tilt.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/IntIntegralImage.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/InteractiveScale.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/InteractiveTilt.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/IntegralImage.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/BlockPMCC.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/DoubleIntegralImage.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/LongRGBIntegralImage.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/Mean.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/integral/Scale.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/blockmatching/BlockMatching.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/clahe/ShortApply.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/clahe/FastFlat.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/clahe/FloatApply.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/clahe/RGBApply.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/clahe/Util.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/clahe/FastByteApply.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/clahe/ByteApply.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/clahe/Flat.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/clahe/Apply.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/Mapping.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/stack/Mapping.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/stack/InverseTransformMapping.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/InverseTransformMapping.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/PaintInvertibleCoordinateTransformThread.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/FeatureTransform.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/InverseMapping.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/visualization/PointVis.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/SIFT.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/InteractiveInvertibleCoordinateTransform.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/InteractiveMapping.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/util/Filter.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/util/Util.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/InvertibleTransformMapping.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/MappingThread.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/Boundable.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/AbstractAffineModel1D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/AbstractAffineModel3D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/TranslationModel3D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/InverseCoordinateTransform.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/Spring.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/ElasticMovingLeastSquaresMesh.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/HomographyModel2D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/AffineModel1D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/InterpolatedAffineModel3D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/InvertibleInterpolatedModel.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/InverseCoordinateTransformMap2D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/InvertibleCoordinateTransformList.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/AbstractMovingLeastSquaresTransform.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/InvertibleBoundable.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/CoordinateTransformList.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/MovingLeastSquaresMesh.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/AffineModel2D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/TransformList.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/IllDefinedDataPointsException.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/ErrorStatistic.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/CoordinateTransformMap2D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/Point.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/InverseCoordinateTransformList.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/PointMatch.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/Model.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/InterpolatedAffineModel2D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/SimilarityModel2D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/Affine3D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/AffineModel3D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/CoordinateTransform.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/MovingLeastSquaresTransform2.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/RigidModel3D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/AbstractAffineModel2D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/Tile.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/Affine1D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/TileConfiguration.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/Transforms.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/TranslationModel2D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/InvertibleCoordinateTransform.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/TransformMeshMap2D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/AbstractModel.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/Affine2D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/MovingLeastSquaresTransform.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/InverseBoundable.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/CoordinateTransformMesh.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/SpringMesh.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/Vertex.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/RigidModel2D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/NotEnoughDataPointsException.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/InterpolatedModel.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/NoninvertibleModelException.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/models/TransformMesh.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/util/RealSum.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/util/DCT.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/util/RingBuffer.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/util/Matrix3x3.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/util/Timer.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/util/Util.java]
using the class path: /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/target/classes:/data/devel/jenkins/.m2/repository/com/apple/AppleJavaExtensions/1.5/AppleJavaExtensions-1.5.jar:/data/devel/jenkins/.m2/repository/net/imagej/ij/1.47q/ij-1.47q.jar:/data/devel/jenkins/.m2/repository/jama/jama/1.0.2/jama-1.0.2.jar:/data/devel/jenkins/jobs/Fiji-daily/workspace/java/linux-amd64/jdk1.6.0_24/jre/../lib/tools.jar
Note: /data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/src/main/java/mpicbg/ij/InteractiveInvertibleCoordinateTransform.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Parsing /data/devel/jenkins/.m2/repository/loci/scifio/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/jai_imageio/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/loci-legacy/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/lwf-stubs/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/ome-xml/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/loci/turbojpeg/4.5-SNAPSHOT/maven-metadata-snapshot.xml
Parsing /data/devel/jenkins/.m2/repository/org/scijava/native-lib-loader/2.0-SNAPSHOT/maven-metadata-snapshot.xml
Compiling 520 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1
[-source, 1.5, -target, 1.5, -classpath, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/target/classes:/data/devel/jenkins/.m2/repository/com/apple/AppleJavaExtensions/1.5/AppleJavaExtensions-1.5.jar:/data/devel/jenkins/.m2/repository/org/ow2/asm/asm/4.0/asm-4.0.jar:/data/devel/jenkins/.m2/repository/bouncycastle/bcmail-jdk14/138/bcmail-jdk14-138.jar:/data/devel/jenkins/.m2/repository/bouncycastle/bcprov-jdk14/138/bcprov-jdk14-138.jar:/data/devel/jenkins/.m2/repository/javax/ejb/ejb-api/3.0/ejb-api-3.0.jar:/data/devel/jenkins/.m2/repository/com/jgoodies/forms/1.2.1/forms-1.2.1.jar:/data/devel/jenkins/.m2/repository/net/imagej/ij/1.47q/ij-1.47q.jar:/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/target/imglib2-2.0.0-SNAPSHOT.jar:/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/target/imglib2-algorithms-2.0.0-SNAPSHOT.jar:/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/ij/target/imglib2-ij-2.0.0-SNAPSHOT.jar:/data/devel/jenkins/.m2/repository/com/lowagie/itext/2.1.5/itext-2.1.5.jar:/data/devel/jenkins/.m2/repository/loci/jai_imageio/4.5-SNAPSHOT/jai_imageio-4.5-20130514.083201-159.jar:/data/devel/jenkins/.m2/repository/jama/jama/1.0.2/jama-1.0.2.jar:/data/devel/jenkins/.m2/repository/org/jfree/jcommon/1.0.17/jcommon-1.0.17.jar:/data/devel/jenkins/.m2/repository/org/jfree/jfreechart/1.0.14/jfreechart-1.0.14.jar:/data/devel/jenkins/.m2/repository/junit/junit/4.8.1/junit-4.8.1.jar:/data/devel/jenkins/.m2/repository/com/esotericsoftware/kryo/kryo/2.21/kryo-2.21-shaded.jar:/data/devel/jenkins/.m2/repository/loci/loci-legacy/4.5-SNAPSHOT/loci-legacy-4.5-20130514.083246-152.jar:/data/devel/jenkins/.m2/repository/loci/lwf-stubs/4.5-SNAPSHOT/lwf-stubs-4.5-20130514.083317-157.jar:/data/devel/jenkins/.m2/repository/edu/mines/mines-jtk/20100113/mines-jtk-20100113.jar:/data/devel/jenkins/.m2/repository/com/esotericsoftware/minlog/minlog/1.2/minlog-1.2.jar:/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/target/mpicbg-0.6.0-SNAPSHOT.jar:/data/devel/jenkins/.m2/repository/org/scijava/native-lib-loader/2.0-SNAPSHOT/native-lib-loader-2.0-20130319.202138-7.jar:/data/devel/jenkins/.m2/repository/org/objenesis/objenesis/1.2/objenesis-1.2.jar:/data/devel/jenkins/.m2/repository/loci/ome-xml/4.5-SNAPSHOT/ome-xml-4.5-20130514.083335-156.jar:/data/devel/jenkins/.m2/repository/org/perf4j/perf4j/0.9.13/perf4j-0.9.13.jar:/data/devel/jenkins/.m2/repository/com/esotericsoftware/reflectasm/reflectasm/1.07/reflectasm-1.07-shaded.jar:/data/devel/jenkins/.m2/repository/loci/scifio/4.5-SNAPSHOT/scifio-4.5-20130514.083423-155.jar:/data/devel/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/scifio-devel-4.5-20130514.083232-152.jar:/data/devel/jenkins/.m2/repository/javax/servlet/servlet-api/2.4/servlet-api-2.4.jar:/data/devel/jenkins/.m2/repository/javax/servlet/servlet-api/2.5/servlet-api-2.5.jar:/data/devel/jenkins/.m2/repository/org/slf4j/slf4j-api/1.5.10/slf4j-api-1.5.10.jar:/data/devel/jenkins/jobs/Fiji-daily/workspace/java/linux-amd64/jdk1.6.0_24/jre/../lib/tools.jar:/data/devel/jenkins/.m2/repository/loci/turbojpeg/4.5-SNAPSHOT/turbojpeg-4.5-20130514.083349-34.jar:/data/devel/jenkins/.m2/repository/java3d/vecmath/1.5.2/vecmath-1.5.2.jar:/data/devel/jenkins/.m2/repository/xml-apis/xml-apis/1.3.04/xml-apis-1.3.04.jar, -d, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/target/classes, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/mpicbg/imglib/interpolation/lanczos/LanczosInterpolator.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/mpicbg/imglib/interpolation/lanczos/LanczosInterpolatorFactory.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/mpicbg/imglib/interpolation/Interpolator2D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/mpicbg/imglib/interpolation/nearestneighbor/NearestNeighborInterpolator1D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/mpicbg/imglib/interpolation/nearestneighbor/NearestNeighborInterpolator2D.java, 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/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/mpicbg/imglib/interpolation/Interpolator.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/mpicbg/imglib/interpolation/InterpolatorFactory.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/mpicbg/imglib/interpolation/linear/LinearInterpolator.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/mpicbg/imglib/interpolation/linear/LinearInterpolator3D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/mpicbg/imglib/interpolation/linear/LinearInterpolator1D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/mpicbg/imglib/interpolation/linear/LinearInterpolatorFactory.java, 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/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/imglib/ops/operator/binary/Multiply.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/imglib/ops/operator/binary/Average.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/imglib/ops/operator/binary/Subtract.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/imglib/ops/operator/binary/Max.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/imglib/ops/operator/binary/Add.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/imglib/ops/operator/binary/Difference.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/imglib/ops/operator/binary/Or.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/imglib/ops/operator/binary/Copy.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/imglib/ops/operator/binary/Divide.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/imglib/ops/operator/binary/And.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/imglib/ops/operator/binary/CopyTransparentZero.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/imglib/ops/operator/UnaryOperator.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/imglib/ops/observer/IterationStatus.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/imglib/ops/observer/ProgressTracker.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/imglib/ops/operation/AssignOperation.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/imglib/ops/operation/MultiImageIterator.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/imglib/ops/condition/Condition.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/imglib/ops/condition/AxisLessThan.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/imglib/ops/condition/Not.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/imglib/ops/condition/ValueGreaterThan.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/imglib/ops/condition/Or.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/imglib/ops/condition/PixelOnBorder.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/imglib/ops/condition/And.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/imglib/ops/condition/ValueLessThan.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/color/Luminance.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/color/Brightness.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/color/fn/ChannelOp.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/color/fn/RGBAOp.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/color/fn/ColorFunction.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/color/fn/HSBOp.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/color/Hue.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/color/Green.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/color/Saturation.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/color/HSB.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/color/Channel.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/color/Red.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/color/RGBA.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/color/Blue.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/color/Alpha.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/analysis/DoGPeaks.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/analysis/PickPeaks.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/analysis/ChartUtils.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/analysis/BarChart.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/analysis/Histogram.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/ImgLib.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Pow.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Min.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Tanh.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Sqrt.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/IEEEremainder.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/fn/FloatImageOperation.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/fn/ImageComputation.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/fn/BinaryOperation.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/fn/NumberFunction.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/fn/Util.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/fn/IFunction.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/fn/UnaryOperation.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/fn/ImageFunction.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Xor.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Exp.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Rint.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Multiply.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Log10.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Cos.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Cbrt.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/ATan.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/ASin.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Tan.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Average.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Subtract.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Random.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Signum.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Log.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Expm1.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/ToDegrees.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Sin.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Max.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Floor.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Add.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Difference.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Log1p.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Round.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Or.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Hypot.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Ceil.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Cosh.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/ToRadians.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Sinh.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/ACos.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Divide.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/And.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Abs.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/ATan2.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/math/Compute.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/algorithm/Resample.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/algorithm/fn/Morph.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/algorithm/fn/AbstractAffine3D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/algorithm/fn/AbstractNormalize.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/algorithm/fn/AlgorithmUtil.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/algorithm/Downsample.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/algorithm/Scale3D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/algorithm/Erode.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/algorithm/Close.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/algorithm/NormalizeSum.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/algorithm/Scale2D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/algorithm/Open.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/algorithm/Normalize.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/algorithm/Process.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/algorithm/Dilate.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/algorithm/MedianFilter.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/algorithm/Gauss.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/algorithm/Affine3D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/algorithm/Affine2D.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/algorithm/InverseFFT.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/algorithm/HoughLineTransform.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/algorithm/Dither.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/algorithm/BandpassFilter.java, /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/script/imglib/algorithm/FFT.java]
using the class path: /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/target/classes:/data/devel/jenkins/.m2/repository/com/apple/AppleJavaExtensions/1.5/AppleJavaExtensions-1.5.jar:/data/devel/jenkins/.m2/repository/org/ow2/asm/asm/4.0/asm-4.0.jar:/data/devel/jenkins/.m2/repository/bouncycastle/bcmail-jdk14/138/bcmail-jdk14-138.jar:/data/devel/jenkins/.m2/repository/bouncycastle/bcprov-jdk14/138/bcprov-jdk14-138.jar:/data/devel/jenkins/.m2/repository/javax/ejb/ejb-api/3.0/ejb-api-3.0.jar:/data/devel/jenkins/.m2/repository/com/jgoodies/forms/1.2.1/forms-1.2.1.jar:/data/devel/jenkins/.m2/repository/net/imagej/ij/1.47q/ij-1.47q.jar:/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/core/target/imglib2-2.0.0-SNAPSHOT.jar:/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/algorithms/core/target/imglib2-algorithms-2.0.0-SNAPSHOT.jar:/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/imglib/imglib2/ij/target/imglib2-ij-2.0.0-SNAPSHOT.jar:/data/devel/jenkins/.m2/repository/com/lowagie/itext/2.1.5/itext-2.1.5.jar:/data/devel/jenkins/.m2/repository/loci/jai_imageio/4.5-SNAPSHOT/jai_imageio-4.5-20130514.083201-159.jar:/data/devel/jenkins/.m2/repository/jama/jama/1.0.2/jama-1.0.2.jar:/data/devel/jenkins/.m2/repository/org/jfree/jcommon/1.0.17/jcommon-1.0.17.jar:/data/devel/jenkins/.m2/repository/org/jfree/jfreechart/1.0.14/jfreechart-1.0.14.jar:/data/devel/jenkins/.m2/repository/junit/junit/4.8.1/junit-4.8.1.jar:/data/devel/jenkins/.m2/repository/com/esotericsoftware/kryo/kryo/2.21/kryo-2.21-shaded.jar:/data/devel/jenkins/.m2/repository/loci/loci-legacy/4.5-SNAPSHOT/loci-legacy-4.5-20130514.083246-152.jar:/data/devel/jenkins/.m2/repository/loci/lwf-stubs/4.5-SNAPSHOT/lwf-stubs-4.5-20130514.083317-157.jar:/data/devel/jenkins/.m2/repository/edu/mines/mines-jtk/20100113/mines-jtk-20100113.jar:/data/devel/jenkins/.m2/repository/com/esotericsoftware/minlog/minlog/1.2/minlog-1.2.jar:/data/devel/jenkins/jobs/Fiji-daily/workspace/modules/mpicbg/mpicbg/target/mpicbg-0.6.0-SNAPSHOT.jar:/data/devel/jenkins/.m2/repository/org/scijava/native-lib-loader/2.0-SNAPSHOT/native-lib-loader-2.0-20130319.202138-7.jar:/data/devel/jenkins/.m2/repository/org/objenesis/objenesis/1.2/objenesis-1.2.jar:/data/devel/jenkins/.m2/repository/loci/ome-xml/4.5-SNAPSHOT/ome-xml-4.5-20130514.083335-156.jar:/data/devel/jenkins/.m2/repository/org/perf4j/perf4j/0.9.13/perf4j-0.9.13.jar:/data/devel/jenkins/.m2/repository/com/esotericsoftware/reflectasm/reflectasm/1.07/reflectasm-1.07-shaded.jar:/data/devel/jenkins/.m2/repository/loci/scifio/4.5-SNAPSHOT/scifio-4.5-20130514.083423-155.jar:/data/devel/jenkins/.m2/repository/loci/scifio-devel/4.5-SNAPSHOT/scifio-devel-4.5-20130514.083232-152.jar:/data/devel/jenkins/.m2/repository/javax/servlet/servlet-api/2.4/servlet-api-2.4.jar:/data/devel/jenkins/.m2/repository/javax/servlet/servlet-api/2.5/servlet-api-2.5.jar:/data/devel/jenkins/.m2/repository/org/slf4j/slf4j-api/1.5.10/slf4j-api-1.5.10.jar:/data/devel/jenkins/jobs/Fiji-daily/workspace/java/linux-amd64/jdk1.6.0_24/jre/../lib/tools.jar:/data/devel/jenkins/.m2/repository/loci/turbojpeg/4.5-SNAPSHOT/turbojpeg-4.5-20130514.083349-34.jar:/data/devel/jenkins/.m2/repository/java3d/vecmath/1.5.2/vecmath-1.5.2.jar:/data/devel/jenkins/.m2/repository/xml-apis/xml-apis/1.3.04/xml-apis-1.3.04.jar
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/mpicbg/imglib/wrapper/ImgLib2.java:205: cannot find symbol
symbol  : method getCells()
location: class net.imglib2.img.cell.CellImg<net.imglib2.type.numeric.real.FloatType,net.imglib2.img.basictypeaccess.array.FloatArray,net.imglib2.img.cell.AbstractCell<net.imglib2.img.basictypeaccess.array.FloatArray>>
		final Cells< FloatArray, AbstractCell< FloatArray > > cells = cellImg.getCells();
		                                                                     ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/mpicbg/imglib/wrapper/ImgLib2.java:241: cannot find symbol
symbol  : method getCells()
location: class net.imglib2.img.cell.CellImg<net.imglib2.type.numeric.real.DoubleType,net.imglib2.img.basictypeaccess.array.DoubleArray,net.imglib2.img.cell.AbstractCell<net.imglib2.img.basictypeaccess.array.DoubleArray>>
		final Cells< DoubleArray, AbstractCell< DoubleArray > > cells = cellImg.getCells();
		                                                                       ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/mpicbg/imglib/wrapper/ImgLib2.java:277: cannot find symbol
symbol  : method getCells()
location: class net.imglib2.img.cell.CellImg<net.imglib2.type.numeric.integer.LongType,net.imglib2.img.basictypeaccess.array.LongArray,net.imglib2.img.cell.AbstractCell<net.imglib2.img.basictypeaccess.array.LongArray>>
		final Cells< LongArray, AbstractCell< LongArray > > cells = cellImg.getCells();
		                                                                   ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/mpicbg/imglib/wrapper/ImgLib2.java:313: cannot find symbol
symbol  : method getCells()
location: class net.imglib2.img.cell.CellImg<net.imglib2.type.numeric.integer.IntType,net.imglib2.img.basictypeaccess.array.IntArray,net.imglib2.img.cell.AbstractCell<net.imglib2.img.basictypeaccess.array.IntArray>>
		final Cells< IntArray, AbstractCell< IntArray > > cells = cellImg.getCells();
		                                                                 ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/mpicbg/imglib/wrapper/ImgLib2.java:349: cannot find symbol
symbol  : method getCells()
location: class net.imglib2.img.cell.CellImg<net.imglib2.type.numeric.integer.UnsignedIntType,net.imglib2.img.basictypeaccess.array.IntArray,net.imglib2.img.cell.AbstractCell<net.imglib2.img.basictypeaccess.array.IntArray>>
		final Cells< IntArray, AbstractCell< IntArray > > cells = cellImg.getCells();
		                                                                 ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/mpicbg/imglib/wrapper/ImgLib2.java:385: cannot find symbol
symbol  : method getCells()
location: class net.imglib2.img.cell.CellImg<net.imglib2.type.numeric.integer.ShortType,net.imglib2.img.basictypeaccess.array.ShortArray,net.imglib2.img.cell.AbstractCell<net.imglib2.img.basictypeaccess.array.ShortArray>>
		final Cells< ShortArray, AbstractCell< ShortArray > > cells = cellImg.getCells();
		                                                                     ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/mpicbg/imglib/wrapper/ImgLib2.java:421: cannot find symbol
symbol  : method getCells()
location: class net.imglib2.img.cell.CellImg<net.imglib2.type.numeric.integer.UnsignedShortType,net.imglib2.img.basictypeaccess.array.ShortArray,net.imglib2.img.cell.AbstractCell<net.imglib2.img.basictypeaccess.array.ShortArray>>
		final Cells< ShortArray, AbstractCell< ShortArray > > cells = cellImg.getCells();
		                                                                     ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/mpicbg/imglib/wrapper/ImgLib2.java:457: cannot find symbol
symbol  : method getCells()
location: class net.imglib2.img.cell.CellImg<net.imglib2.type.numeric.integer.ByteType,net.imglib2.img.basictypeaccess.array.ByteArray,net.imglib2.img.cell.AbstractCell<net.imglib2.img.basictypeaccess.array.ByteArray>>
		final Cells< ByteArray, AbstractCell< ByteArray > > cells = cellImg.getCells();
		                                                                   ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/legacy-imglib1/src/main/java/mpicbg/imglib/wrapper/ImgLib2.java:493: cannot find symbol
symbol  : method getCells()
location: class net.imglib2.img.cell.CellImg<net.imglib2.type.numeric.integer.UnsignedByteType,net.imglib2.img.basictypeaccess.array.ByteArray,net.imglib2.img.cell.AbstractCell<net.imglib2.img.basictypeaccess.array.ByteArray>>
		final Cells< ByteArray, AbstractCell< ByteArray > > cells = cellImg.getCells();
		                                                                   ^
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
9 errors
Exception in thread "main" imagej.build.minimaven.JavaCompiler$CompileError: Compile error: 1
	at imagej.build.minimaven.JavaCompiler.call(JavaCompiler.java:83)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:444)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:375)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:398)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:375)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:398)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:332)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:327)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:327)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:289)
	at imagej.build.MiniMaven.main(MiniMaven.java:138)
Build step 'Execute shell' marked build as failure
Archiving artifacts
Failed to send e-mail to Jenkins because no e-mail address is known, and no default e-mail domain is configured