[ImageJ-builds] Build failed in Jenkins: fiji-core #677
Jenkins Daemon
jenkins at qa.nest-initiative.org
Tue Mar 19 14:37:35 CDT 2013
See <https://qa.nest-initiative.org/job/fiji-core/677/>
------------------------------------------
Started by remote host 144.92.48.145
Building remotely on fc-18-i386-7 in workspace <https://qa.nest-initiative.org/job/fiji-core/ws/>
Checkout:fiji-core / <https://qa.nest-initiative.org/job/fiji-core/ws/> - hudson.remoting.Channel at 32c9d590:fc-18-i386-7
Using strategy: Default
Last Built Revision: Revision 7336fd7be1267383c37a8a3e5a0c2bab676246d0 (origin/master)
Fetching changes from 1 remote Git repository
Commencing build of Revision 97089f872dfd171c3d8ea78146a54777ef258eff (origin/master)
Checking out Revision 97089f872dfd171c3d8ea78146a54777ef258eff (origin/master)
Cleaning workspace
[fiji-core] $ /bin/bash /tmp/hudson2767452861644975516.sh
+ ./Build.sh -Dminimaven.updateinterval=1 -- verbose=true
Cloning into '<https://qa.nest-initiative.org/job/fiji-core/ws/modules/scijava-common'...>
Downloading sc.fiji:javac:2.0.0-SNAPSHOT
Downloading org.scijava:scijava-common:1.0.0-SNAPSHOT
Downloading net.imagej:ij-core:2.0.0-SNAPSHOT
Downloading net.imagej:ij-minimaven:2.0.0-SNAPSHOT
Downloading net.imagej:ij-updater-ssh:2.0.0-SNAPSHOT
Downloading net.imagej:ij-ui-swing-updater:2.0.0-SNAPSHOT
Looking at children of pom-fiji
Looking at children of pom-fiji-plugins
Compiling 26 files in <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/fiji-lib>
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Compiling 22 files in <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/pal-optimization>
Compiling 190 files in <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/VIB-lib>
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Compiling 121 files in <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer>
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/marchingcubes/MCCube.java>:15: package mpicbg.imglib.container.shapelist does not exist
import mpicbg.imglib.container.shapelist.ShapeList;
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/ij3d/ImgLibVolume.java>:3: package mpicbg.imglib.cursor does not exist
import mpicbg.imglib.cursor.LocalizableByDimCursor;
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/ij3d/ImgLibVolume.java>:4: package mpicbg.imglib.image does not exist
import mpicbg.imglib.image.Image;
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/ij3d/ImgLibVolume.java>:5: package mpicbg.imglib.type.numeric does not exist
import mpicbg.imglib.type.numeric.RealType;
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/ij3d/ImgLibVolume.java>:6: package mpicbg.imglib.outofbounds does not exist
import mpicbg.imglib.outofbounds.OutOfBoundsStrategyValueFactory;
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/ij3d/ImgLibVolume.java>:13: cannot find symbol
symbol: class RealType
public class ImgLibVolume<T extends RealType<T>> extends Volume {
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/ij3d/ImgLibVolume.java>:15: cannot find symbol
symbol : class Image
location: class ij3d.ImgLibVolume<T>
final Image<T> img;
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/ij3d/ImgLibVolume.java>:16: cannot find symbol
symbol : class LocalizableByDimCursor
location: class ij3d.ImgLibVolume<T>
LocalizableByDimCursor<T> cursor = null;
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/ij3d/ImgLibVolume.java>:18: cannot find symbol
symbol : class Image
location: class ij3d.ImgLibVolume<T>
public ImgLibVolume(final Image<T> img, final float[] origin) throws Exception {
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/ij3d/ImgLibVolume.java>:49: cannot find symbol
symbol : class Image
location: class ij3d.ImgLibVolume<T>
public Image<T> getImage() {
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/marchingcubes/MCTriangulator.java>:18: package mpicbg.imglib.image does not exist
import mpicbg.imglib.image.Image;
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/marchingcubes/MCTriangulator.java>:19: package mpicbg.imglib.type.numeric does not exist
import mpicbg.imglib.type.numeric.RealType;
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/marchingcubes/MCTriangulator.java>:48: cannot find symbol
symbol : class RealType
location: class marchingcubes.MCTriangulator
public<T extends RealType<T>> List<Point3f> getTriangles(Image<T> img, int threshold, float[] origin) throws Exception {
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/marchingcubes/MCTriangulator.java>:48: cannot find symbol
symbol : class Image
location: class marchingcubes.MCTriangulator
public<T extends RealType<T>> List<Point3f> getTriangles(Image<T> img, int threshold, float[] origin) throws Exception {
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/marchingcubes/MCCube.java>:196: cannot find symbol
symbol : class ShapeList
location: class marchingcubes.MCCube
if (volume instanceof ImgLibVolume && ((ImgLibVolume)volume).getImage().getContainer() instanceof ShapeList) {
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/marchingcubes/MCCube.java>:224: cannot find symbol
symbol : class ShapeList
location: class marchingcubes.MCCube
final ShapeList sli = (ShapeList) volume.getImage().getContainer();
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/marchingcubes/MCCube.java>:224: cannot find symbol
symbol : class ShapeList
location: class marchingcubes.MCCube
final ShapeList sli = (ShapeList) volume.getImage().getContainer();
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/ij3d/ImgLibVolume.java>:58: cannot find symbol
symbol : class OutOfBoundsStrategyValueFactory
location: class ij3d.ImgLibVolume<T>
this.cursor = img.createLocalizableByDimCursor(new OutOfBoundsStrategyValueFactory<T>(val));
^
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
18 errors
Exception in thread "main" imagej.build.minimaven.JavaCompiler$CompileError: Compile error: 1
at imagej.build.minimaven.JavaCompiler.call(JavaCompiler.java:84)
at imagej.build.minimaven.MavenProject.build(MavenProject.java:443)
at imagej.build.minimaven.MavenProject.build(MavenProject.java:374)
at imagej.build.minimaven.MavenProject.build(MavenProject.java:397)
at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:331)
at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:326)
at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:326)
at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:288)
at imagej.build.MiniMaven.main(MiniMaven.java:133)
Looking at children of pom-fiji
Looking at children of pom-fiji-plugins
Compiling 121 files in <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer>
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/marchingcubes/MCCube.java>:15: package mpicbg.imglib.container.shapelist does not exist
import mpicbg.imglib.container.shapelist.ShapeList;
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/ij3d/ImgLibVolume.java>:3: package mpicbg.imglib.cursor does not exist
import mpicbg.imglib.cursor.LocalizableByDimCursor;
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/ij3d/ImgLibVolume.java>:4: package mpicbg.imglib.image does not exist
import mpicbg.imglib.image.Image;
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/ij3d/ImgLibVolume.java>:5: package mpicbg.imglib.type.numeric does not exist
import mpicbg.imglib.type.numeric.RealType;
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/ij3d/ImgLibVolume.java>:6: package mpicbg.imglib.outofbounds does not exist
import mpicbg.imglib.outofbounds.OutOfBoundsStrategyValueFactory;
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/ij3d/ImgLibVolume.java>:13: cannot find symbol
symbol: class RealType
public class ImgLibVolume<T extends RealType<T>> extends Volume {
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/ij3d/ImgLibVolume.java>:15: cannot find symbol
symbol : class Image
location: class ij3d.ImgLibVolume<T>
final Image<T> img;
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/ij3d/ImgLibVolume.java>:16: cannot find symbol
symbol : class LocalizableByDimCursor
location: class ij3d.ImgLibVolume<T>
LocalizableByDimCursor<T> cursor = null;
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/ij3d/ImgLibVolume.java>:18: cannot find symbol
symbol : class Image
location: class ij3d.ImgLibVolume<T>
public ImgLibVolume(final Image<T> img, final float[] origin) throws Exception {
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/ij3d/ImgLibVolume.java>:49: cannot find symbol
symbol : class Image
location: class ij3d.ImgLibVolume<T>
public Image<T> getImage() {
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/marchingcubes/MCTriangulator.java>:18: package mpicbg.imglib.image does not exist
import mpicbg.imglib.image.Image;
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/marchingcubes/MCTriangulator.java>:19: package mpicbg.imglib.type.numeric does not exist
import mpicbg.imglib.type.numeric.RealType;
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/marchingcubes/MCTriangulator.java>:48: cannot find symbol
symbol : class RealType
location: class marchingcubes.MCTriangulator
public<T extends RealType<T>> List<Point3f> getTriangles(Image<T> img, int threshold, float[] origin) throws Exception {
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/marchingcubes/MCTriangulator.java>:48: cannot find symbol
symbol : class Image
location: class marchingcubes.MCTriangulator
public<T extends RealType<T>> List<Point3f> getTriangles(Image<T> img, int threshold, float[] origin) throws Exception {
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/marchingcubes/MCCube.java>:196: cannot find symbol
symbol : class ShapeList
location: class marchingcubes.MCCube
if (volume instanceof ImgLibVolume && ((ImgLibVolume)volume).getImage().getContainer() instanceof ShapeList) {
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/marchingcubes/MCCube.java>:224: cannot find symbol
symbol : class ShapeList
location: class marchingcubes.MCCube
final ShapeList sli = (ShapeList) volume.getImage().getContainer();
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/marchingcubes/MCCube.java>:224: cannot find symbol
symbol : class ShapeList
location: class marchingcubes.MCCube
final ShapeList sli = (ShapeList) volume.getImage().getContainer();
^
<https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer/src/main/java/ij3d/ImgLibVolume.java>:58: cannot find symbol
symbol : class OutOfBoundsStrategyValueFactory
location: class ij3d.ImgLibVolume<T>
this.cursor = img.createLocalizableByDimCursor(new OutOfBoundsStrategyValueFactory<T>(val));
^
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
18 errors
Exception in thread "main" imagej.build.minimaven.JavaCompiler$CompileError: Compile error: 1
at imagej.build.minimaven.JavaCompiler.call(JavaCompiler.java:84)
at imagej.build.minimaven.MavenProject.build(MavenProject.java:443)
at imagej.build.minimaven.MavenProject.build(MavenProject.java:374)
at imagej.build.minimaven.MavenProject.build(MavenProject.java:397)
at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:331)
at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:326)
at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:326)
at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:288)
at imagej.build.MiniMaven.main(MiniMaven.java:133)
Build step 'Execute shell' marked build as failure
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