[ImageJ-builds] Jenkins-Build fehlgeschlagen: Fiji-daily #663

jenkins at imagej.net jenkins at imagej.net
Wed Mar 13 00:43:58 CDT 2013


Siehe <http://jenkins.imagej.net/job/Fiji-daily/663/>

------------------------------------------
[...truncated 508 lines...]
Note: /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/3D_Objects_Counter/src/main/java/Utilities/Counter3D.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
18 warnings
Compiling 3 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Algorithm_Launcher
Note: /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Algorithm_Launcher/src/main/java/AlgorithmInfo.java uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Compiling 6 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/AnalyzeSkeleton_
Note: /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/AnalyzeSkeleton_/src/main/java/skeleton_analysis/AnalyzeSkeleton_.java uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Compiling 2 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Analyze_Reader_Writer
Compiling 1 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Anisotropic_Diffusion_2D
Compiling 3 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Arrow_
Compiling 2 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Auto_Threshold
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Auto_Threshold/src/main/java/fiji/threshold/Auto_Threshold.java:506: warning: unmappable character for encoding ASCII
		// ???at valley are unsuitable for this method.
		   ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Auto_Threshold/src/main/java/fiji/threshold/Auto_Threshold.java:506: warning: unmappable character for encoding ASCII
		// ???at valley are unsuitable for this method.
		    ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Auto_Threshold/src/main/java/fiji/threshold/Auto_Threshold.java:506: warning: unmappable character for encoding ASCII
		// ???at valley are unsuitable for this method.
		     ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Auto_Threshold/src/main/java/fiji/threshold/Auto_Threshold.java:868: warning: unmappable character for encoding ASCII
		// Threshold t is such that yt???1 > yt ??? yt+1.
		                              ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Auto_Threshold/src/main/java/fiji/threshold/Auto_Threshold.java:868: warning: unmappable character for encoding ASCII
		// Threshold t is such that yt???1 > yt ??? yt+1.
		                               ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Auto_Threshold/src/main/java/fiji/threshold/Auto_Threshold.java:868: warning: unmappable character for encoding ASCII
		// Threshold t is such that yt???1 > yt ??? yt+1.
		                                ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Auto_Threshold/src/main/java/fiji/threshold/Auto_Threshold.java:868: warning: unmappable character for encoding ASCII
		// Threshold t is such that yt???1 > yt ??? yt+1.
		                                        ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Auto_Threshold/src/main/java/fiji/threshold/Auto_Threshold.java:868: warning: unmappable character for encoding ASCII
		// Threshold t is such that yt???1 > yt ??? yt+1.
		                                         ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Auto_Threshold/src/main/java/fiji/threshold/Auto_Threshold.java:868: warning: unmappable character for encoding ASCII
		// Threshold t is such that yt???1 > yt ??? yt+1.
		                                          ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Auto_Threshold/src/main/java/fiji/threshold/Auto_Threshold.java:870: warning: unmappable character for encoding ASCII
		// ???at valley are unsuitable for this method.
		   ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Auto_Threshold/src/main/java/fiji/threshold/Auto_Threshold.java:870: warning: unmappable character for encoding ASCII
		// ???at valley are unsuitable for this method.
		    ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Auto_Threshold/src/main/java/fiji/threshold/Auto_Threshold.java:870: warning: unmappable character for encoding ASCII
		// ???at valley are unsuitable for this method.
		     ^
12 warnings
Compiling 8 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/BalloonSegmentation_
Note: /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/BalloonSegmentation_/src/main/java/BalloonSegmentation_.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Warning: /data/devel/jenkins/jobs/Fiji-daily/workspace/java/linux-amd64/jdk1.6.0_24/jre/../lib/tools.jar overrides com.sun>tools

Warning: /data/devel/jenkins/jobs/Fiji-daily/workspace/java/linux-amd64/jdk1.6.0_24/jre/../lib/tools.jar overrides com.sun>tools

Compiling 26 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-compat
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-compat/src/main/java/fiji/PerformanceProfiler.java:622: warning: unmappable character for encoding ASCII
		if (nanos < 1000000) return (nanos / 1000.0) + "??s";
		                                                ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-compat/src/main/java/fiji/PerformanceProfiler.java:622: warning: unmappable character for encoding ASCII
		if (nanos < 1000000) return (nanos / 1000.0) + "??s";
		                                                 ^
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
2 warnings
Compiling 3 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/fiji-scripting
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Compiling 2 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/BeanShell_Interpreter
Compiling 3 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Bug_Submitter
Compiling 9 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/CLI_
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Compiling 1 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/CPU_Meter
Compiling 1 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Calculator_Plus
Compiling 2 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Clojure_Interpreter
Note: /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Clojure_Interpreter/src/main/java/Clojure/Clojure_Interpreter.java uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Compiling 42 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Colocalisation_Analysis
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Colocalisation_Analysis/src/main/java/Colocalisation_Test.java:171: warning: unmappable character for encoding ASCII
		gd2.addNumericField("Pixel Size (??m)", pixelSize,3);
		                                 ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Colocalisation_Analysis/src/main/java/Colocalisation_Test.java:171: warning: unmappable character for encoding ASCII
		gd2.addNumericField("Pixel Size (??m)", pixelSize,3);
		                                  ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Colocalisation_Analysis/src/main/java/Colocalisation_Test.java:660: warning: unmappable character for encoding ASCII
	+"\tR(rand) mean??sd"
	                ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Colocalisation_Analysis/src/main/java/Colocalisation_Test.java:660: warning: unmappable character for encoding ASCII
	+"\tR(rand) mean??sd"
	                 ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Colocalisation_Analysis/src/main/java/Colocalisation_Test.java:668: warning: unmappable character for encoding ASCII
	if (Costes||rBlocks) strPSF =  df3.format(psf*pixelSize*2)+ " ??m ("+df0.format(psf*2)+" pix.)" ;
	                                                              ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Colocalisation_Analysis/src/main/java/Colocalisation_Test.java:668: warning: unmappable character for encoding ASCII
	if (Costes||rBlocks) strPSF =  df3.format(psf*pixelSize*2)+ " ??m ("+df0.format(psf*2)+" pix.)" ;
	                                                               ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Colocalisation_Analysis/src/main/java/Colocalisation_Test.java:672: warning: unmappable character for encoding ASCII
		"\t" +df3.format(r2mean) + "??"+ df3.format(r2sd)+
		                            ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Colocalisation_Analysis/src/main/java/Colocalisation_Test.java:672: warning: unmappable character for encoding ASCII
		"\t" +df3.format(r2mean) + "??"+ df3.format(r2sd)+
		                             ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Colocalisation_Analysis/src/main/java/Colocalisation_Threshold.java:695: warning: unmappable character for encoding ASCII
		//[i.e. E(ch1if ch2>0) ?? E(ch1total)]
		                       ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Colocalisation_Analysis/src/main/java/Colocalisation_Threshold.java:695: warning: unmappable character for encoding ASCII
		//[i.e. E(ch1if ch2>0) ?? E(ch1total)]
		                        ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Colocalisation_Analysis/src/main/java/Colocalisation_Threshold.java:702: warning: unmappable character for encoding ASCII
		//[i.e. E(ch1 if ch2>ch2threshold) ?? (Ech1total)]
		                                   ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Colocalisation_Analysis/src/main/java/Colocalisation_Threshold.java:702: warning: unmappable character for encoding ASCII
		//[i.e. E(ch1 if ch2>ch2threshold) ?? (Ech1total)]
		                                    ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Colocalisation_Analysis/src/main/java/Colocalisation_Threshold.java:707: warning: unmappable character for encoding ASCII
		//[i.e. E(ch1>ch1threshold) ?? E(ch1total)]
		                            ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Colocalisation_Analysis/src/main/java/Colocalisation_Threshold.java:707: warning: unmappable character for encoding ASCII
		//[i.e. E(ch1>ch1threshold) ?? E(ch1total)]
		                             ^
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Colocalisation_Analysis/src/main/java/results/SingleWindowDisplay.java uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
14 warnings
Compiling 1 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Color_Histogram
Note: /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Color_Histogram/src/main/java/ColorHistogram_.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Compiling 4 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Color_Inspector_3D
Note: /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Color_Inspector_3D/src/main/java/Color_Inspector_3D.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Compiling 1 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Colour_Deconvolution
Compiling 8 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/CorrectBleach_
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/CorrectBleach_/src/main/java/emblcmci/BleachCorrection_ExpoFit.java:8: warning: unmappable character for encoding ASCII
 * Copyright ?? 2010 Kota Miura
             ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/CorrectBleach_/src/main/java/emblcmci/BleachCorrection_ExpoFit.java:8: warning: unmappable character for encoding ASCII
 * Copyright ?? 2010 Kota Miura
              ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/CorrectBleach_/src/main/java/emblcmci/BleachCorrection_SimpleRatio.java:13: warning: unmappable character for encoding ASCII
 * Copyright ?? 2004, 2005, 2010 Jens Rietdorf, Kota Miura
             ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/CorrectBleach_/src/main/java/emblcmci/BleachCorrection_SimpleRatio.java:13: warning: unmappable character for encoding ASCII
 * Copyright ?? 2004, 2005, 2010 Jens Rietdorf, Kota Miura
              ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/CorrectBleach_/src/main/java/emblcmci/BleachCorrection_MH.java:15: warning: unmappable character for encoding ASCII
 * Copyright ?? 2010 Kota Miura
             ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/CorrectBleach_/src/main/java/emblcmci/BleachCorrection_MH.java:15: warning: unmappable character for encoding ASCII
 * Copyright ?? 2010 Kota Miura
              ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/CorrectBleach_/src/main/java/emblcmci/BleachCorrection.java:22: warning: unmappable character for encoding ASCII
 * Copyright ?? 2010 Kota Miura
             ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/CorrectBleach_/src/main/java/emblcmci/BleachCorrection.java:22: warning: unmappable character for encoding ASCII
 * Copyright ?? 2010 Kota Miura
              ^
8 warnings
Compiling 33 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Fiji_Plugins
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Fiji_Plugins/src/main/java/fiji/geom/Shape_Index_Map.java:16: warning: unmappable character for encoding ASCII
 * J Koenderink and A van Doorn, ???Surface shape and
                                 ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Fiji_Plugins/src/main/java/fiji/geom/Shape_Index_Map.java:16: warning: unmappable character for encoding ASCII
 * J Koenderink and A van Doorn, ???Surface shape and
                                  ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Fiji_Plugins/src/main/java/fiji/geom/Shape_Index_Map.java:16: warning: unmappable character for encoding ASCII
 * J Koenderink and A van Doorn, ???Surface shape and
                                   ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Fiji_Plugins/src/main/java/fiji/geom/Shape_Index_Map.java:17: warning: unmappable character for encoding ASCII
 * curvature scales,??? Image Vision Comput, vol. 10, no. 8,
                    ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Fiji_Plugins/src/main/java/fiji/geom/Shape_Index_Map.java:17: warning: unmappable character for encoding ASCII
 * curvature scales,??? Image Vision Comput, vol. 10, no. 8,
                     ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Fiji_Plugins/src/main/java/fiji/geom/Shape_Index_Map.java:17: warning: unmappable character for encoding ASCII
 * curvature scales,??? Image Vision Comput, vol. 10, no. 8,
                      ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Fiji_Plugins/src/main/java/fiji/geom/Shape_Index_Map.java:18: warning: unmappable character for encoding ASCII
 * pp. 557???565, 1992
          ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Fiji_Plugins/src/main/java/fiji/geom/Shape_Index_Map.java:18: warning: unmappable character for encoding ASCII
 * pp. 557???565, 1992
           ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Fiji_Plugins/src/main/java/fiji/geom/Shape_Index_Map.java:18: warning: unmappable character for encoding ASCII
 * pp. 557???565, 1992
            ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Fiji_Plugins/src/main/java/fiji/stacks/Dynamic_Reslice.java:78: warning: unmappable character for encoding ASCII
	 * Is set to true, then rotate the destination by 90??.
	                                                    ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Fiji_Plugins/src/main/java/fiji/stacks/Dynamic_Reslice.java:78: warning: unmappable character for encoding ASCII
	 * Is set to true, then rotate the destination by 90??.
	                                                     ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Fiji_Plugins/src/main/java/fiji/stacks/Dynamic_Reslice.java:724: warning: unmappable character for encoding ASCII
	 * will be rotated 90??.
	                     ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Fiji_Plugins/src/main/java/fiji/stacks/Dynamic_Reslice.java:724: warning: unmappable character for encoding ASCII
	 * will be rotated 90??.
	                      ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Fiji_Plugins/src/main/java/fiji/stacks/Dynamic_Reslice.java:732: warning: unmappable character for encoding ASCII
	 * will be be rotated 90??. Cannot be changed after the start() method has been
	                        ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Fiji_Plugins/src/main/java/fiji/stacks/Dynamic_Reslice.java:732: warning: unmappable character for encoding ASCII
	 * will be be rotated 90??. Cannot be changed after the start() method has been
	                         ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Fiji_Plugins/src/main/java/fiji/denoise/ROF_Denoise.java:23: warning: unmappable character for encoding ASCII
 * Based on the Matlab code by Philippe Magiera & Carl L??ndahl:
                                                        ^
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Fiji_Plugins/src/main/java/fiji/denoise/ROF_Denoise.java:23: warning: unmappable character for encoding ASCII
 * Based on the Matlab code by Philippe Magiera & Carl L??ndahl:
                                                         ^
Note: /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/Fiji_Plugins/src/main/java/Retinex_.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Compiling 16 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/SPIM_Opener
Note: /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/SPIM_Opener/src/main/java/spimopener/GaussianStackFocuser.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Compiling 146 files in /data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/SPIM_Registration
/data/devel/jenkins/jobs/Fiji-daily/workspace/src-plugins/SPIM_Registration/src/main/java/mpicbg/spim/registration/detection/AbstractDetection.java:36: getID() in mpicbg.spim.registration.detection.AbstractDetection cannot override getID() in mpicbg.models.Point; attempting to use incompatible return type
found   : int
required: long
	public int getID() { return id; }
	           ^
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
1 error
Exception in thread "main" imagej.build.minimaven.JavaCompiler$CompileError: Compile error: 1
	at imagej.build.minimaven.JavaCompiler.call(JavaCompiler.java:84)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:443)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:374)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:397)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:331)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:326)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:326)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:288)
	at imagej.build.MiniMaven.main(MiniMaven.java:133)
Build step 'Shell ausf?hren' marked build as failure
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