[ImageJ-builds] Build failed in Jenkins: ImageJ #4696
jenkins at imagej.net
jenkins at imagej.net
Thu Jun 27 15:35:29 CDT 2013
See <http://jenkins.imagej.net/job/ImageJ/4696/changes>
Changes:
[Curtis Rueden] ij-data: fix alphabetization of dependencies
[Curtis Rueden] DatasetService: add I/O convenience methods
[Curtis Rueden] Use new DatasetService I/O methods
[Curtis Rueden] Add an I/O plugin type for extensible data I/O
[Curtis Rueden] Remove the obsolete StatusDispatcher class
[Curtis Rueden] Add an I/O plugin for Datasets
[Curtis Rueden] Add an I/O plugin for text formats
[Curtis Rueden] Add an I/O plugin for LUTs
[Curtis Rueden] Refactor the IOService and move it into ij-core
[Curtis Rueden] DatasetIOPlugin: make low priority
[Curtis Rueden] LUTService: add a FIXME note about display of LUTs
[Curtis Rueden] Add I/O plugin stub for scripts
------------------------------------------
[...truncated 75 lines...]
[INFO] ImageJ Plugins: Platforms
[INFO] ImageJ Plugins: Text Formats
[INFO] ImageJ POM: Uploaders
[INFO] ImageJ Updater support for uploading via SSH/SFTP
[INFO] ImageJ Updater support for uploading via WebDAV
[INFO] ImageJ UI: Common AWT Classes
[INFO] ImageJ POM: Swing UI
[INFO] ImageJ Utility Classes: Swing
[INFO] ImageJ POM: UIs
[INFO] ImageJ UI: Swing
[INFO] ImageJ UI: Swing Commands
[INFO] The Script Editor
[INFO] ImageJ UI: Swing Tools
[INFO] ImageJ Updater (Swing)
[INFO] ImageJ Application
[INFO] ImageJ UI: AWT
[INFO] ImageJ UI: Pivot
[INFO] ImageJ UI: SWT
[INFO] ------------------------------------------------------------------------
[INFO] Building ImageJ Projects
[INFO] task-segment: [clean, install]
[INFO] ------------------------------------------------------------------------
[INFO] [clean:clean {execution: default-clean}]
[INFO] [imagej:set-rootdir {execution: set-rootdir}]
[INFO] Setting rootdir: /data/devel/jenkins/jobs/ImageJ/workspace
[INFO] [buildnumber:create {execution: default}]
[INFO] Checking for local modifications: skipped.
[INFO] Updating project files from SCM: skipped.
[INFO] Executing: /bin/sh -c cd /data/devel/jenkins/jobs/ImageJ/workspace && git rev-parse --verify HEAD
[INFO] Working directory: /data/devel/jenkins/jobs/ImageJ/workspace
[INFO] Storing buildNumber: c239a613766ecc6d33a479d523c3fea003e1d790 at timestamp: 1372365320462
[INFO] Executing: /bin/sh -c cd /data/devel/jenkins/jobs/ImageJ/workspace && git rev-parse --verify HEAD
[INFO] Working directory: /data/devel/jenkins/jobs/ImageJ/workspace
[INFO] Storing buildScmBranch: UNKNOWN
[INFO] [site:attach-descriptor {execution: default-attach-descriptor}]
[INFO] Preparing source:jar
[WARNING] Removing: jar from forked lifecycle, to prevent recursive invocation.
[INFO] [imagej:set-rootdir {execution: set-rootdir}]
[INFO] [buildnumber:create {execution: default}]
[INFO] [source:jar {execution: default}]
[INFO] [jar:test-jar {execution: default}]
[WARNING] JAR will be empty - no content was marked for inclusion!
[INFO] Building jar: /data/devel/jenkins/jobs/ImageJ/workspace/target/pom-ij-base-2.0.0-SNAPSHOT-tests.jar
[INFO] [install:install {execution: default-install}]
[INFO] Installing /data/devel/jenkins/jobs/ImageJ/workspace/pom.xml to /var/lib/jenkins/.m2/repository/net/imagej/pom-ij-base/2.0.0-SNAPSHOT/pom-ij-base-2.0.0-SNAPSHOT.pom
[INFO] Installing /data/devel/jenkins/jobs/ImageJ/workspace/target/pom-ij-base-2.0.0-SNAPSHOT-tests.jar to /var/lib/jenkins/.m2/repository/net/imagej/pom-ij-base/2.0.0-SNAPSHOT/pom-ij-base-2.0.0-SNAPSHOT-tests.jar
[INFO] [imagej:copy-jars {execution: copy-jars}]
[INFO] Property 'imagej.app.directory' unset; Skipping copy-jars
[INFO] ------------------------------------------------------------------------
[INFO] Building ImageJ POM: Core
[INFO] task-segment: [clean, install]
[INFO] ------------------------------------------------------------------------
[INFO] [clean:clean {execution: default-clean}]
[INFO] [imagej:set-rootdir {execution: set-rootdir}]
[INFO] [buildnumber:create {execution: default}]
[INFO] [site:attach-descriptor {execution: default-attach-descriptor}]
[INFO] Preparing source:jar
[WARNING] Removing: jar from forked lifecycle, to prevent recursive invocation.
[INFO] [imagej:set-rootdir {execution: set-rootdir}]
[INFO] [buildnumber:create {execution: default}]
[INFO] [source:jar {execution: default}]
[INFO] [jar:test-jar {execution: default}]
[WARNING] JAR will be empty - no content was marked for inclusion!
[INFO] Building jar: /data/devel/jenkins/jobs/ImageJ/workspace/core/target/pom-ij-core-2.0.0-SNAPSHOT-tests.jar
[INFO] [install:install {execution: default-install}]
[INFO] Installing /data/devel/jenkins/jobs/ImageJ/workspace/core/pom.xml to /var/lib/jenkins/.m2/repository/net/imagej/pom-ij-core/2.0.0-SNAPSHOT/pom-ij-core-2.0.0-SNAPSHOT.pom
[INFO] Installing /data/devel/jenkins/jobs/ImageJ/workspace/core/target/pom-ij-core-2.0.0-SNAPSHOT-tests.jar to /var/lib/jenkins/.m2/repository/net/imagej/pom-ij-core/2.0.0-SNAPSHOT/pom-ij-core-2.0.0-SNAPSHOT-tests.jar
[INFO] [imagej:copy-jars {execution: copy-jars}]
[INFO] Property 'imagej.app.directory' unset; Skipping copy-jars
[INFO] ------------------------------------------------------------------------
[INFO] Building ImageJ Core Classes
[INFO] task-segment: [clean, install]
[INFO] ------------------------------------------------------------------------
[INFO] [clean:clean {execution: default-clean}]
[INFO] [imagej:set-rootdir {execution: set-rootdir}]
[INFO] [buildnumber:create {execution: default}]
[debug] execute contextualize
[INFO] [resources:resources {execution: default-resources}]
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 2 resources
[INFO] [compiler:compile {execution: default-compile}]
[INFO] Compiling 239 source files to /data/devel/jenkins/jobs/ImageJ/workspace/core/core/target/classes
[debug] execute contextualize
[INFO] [resources:testResources {execution: default-testResources}]
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /data/devel/jenkins/jobs/ImageJ/workspace/core/core/src/test/resources
[INFO] [compiler:testCompile {execution: default-testCompile}]
[INFO] Compiling 8 source files to /data/devel/jenkins/jobs/ImageJ/workspace/core/core/target/test-classes
[INFO] [surefire:test {execution: default-test}]
[INFO] Surefire report directory: /data/devel/jenkins/jobs/ImageJ/workspace/core/core/target/surefire-reports
-------------------------------------------------------
T E S T S
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Running imagej.display.DisplayTest
WARN: Updating the annotation index in /data/devel/jenkins/jobs/ImageJ/workspace/core/core/target/classes
Note: /data/devel/jenkins/jobs/ImageJ/workspace/core/core/src/main/java/imagej/config/ConfigFileParameters.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
SezPoz generated annotations.
[INFO] Created service: org.scijava.log.StderrLogService
[INFO] Created service: org.scijava.thread.DefaultThreadService
[INFO] Created service: org.scijava.event.DefaultEventService
[INFO] Created service: org.scijava.object.DefaultObjectService
[INFO] Found 40 plugins.
[INFO] Created service: org.scijava.plugin.DefaultPluginService
[INFO] Created service: imagej.display.DefaultDisplayService
[INFO] Created service: org.scijava.log.StderrLogService
[INFO] Created service: org.scijava.thread.DefaultThreadService
[INFO] Created service: org.scijava.event.DefaultEventService
[INFO] Created service: org.scijava.object.DefaultObjectService
[INFO] Found 40 plugins.
[INFO] Created service: org.scijava.plugin.DefaultPluginService
[INFO] Created service: imagej.display.DefaultDisplayService
[INFO] Created service: org.scijava.log.StderrLogService
[INFO] Created service: org.scijava.thread.DefaultThreadService
[INFO] Created service: org.scijava.event.DefaultEventService
[INFO] Created service: org.scijava.object.DefaultObjectService
[INFO] Found 40 plugins.
[INFO] Created service: org.scijava.plugin.DefaultPluginService
[INFO] Created service: imagej.display.DefaultDisplayService
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.378 sec
Running imagej.menu.ShadowMenuTest
Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.069 sec
Running imagej.script.JavascriptTest
[INFO] Created service: org.scijava.log.StderrLogService
[INFO] Created service: org.scijava.thread.DefaultThreadService
[INFO] Created service: org.scijava.event.DefaultEventService
[INFO] Found 40 plugins.
[INFO] Created service: org.scijava.plugin.DefaultPluginService
[INFO] Found 0 TextFormat plugins.
[INFO] Created service: imagej.text.DefaultTextService
[INFO] Created service: org.scijava.object.DefaultObjectService
[INFO] Created service: imagej.display.DefaultDisplayService
[INFO] Found 2 IOPlugin plugins.
[INFO] Created service: imagej.io.DefaultIOService
[INFO] Created service: imagej.module.DefaultModuleService
[INFO] Created service: imagej.command.DefaultCommandService
[INFO] Created service: imagej.io.DefaultRecentFileService
[INFO] Found [] InputWidget plugins.
[INFO] Created service: imagej.widget.DefaultWidgetService
[INFO] Created service: imagej.menu.DefaultMenuService
[INFO] Found 2 applications.
[INFO] Created service: org.scijava.app.DefaultAppService
[INFO] Created service: org.scijava.app.DefaultStatusService
[INFO] Found 0 Tool plugins.
[INFO] Created service: imagej.tool.DefaultToolService
[INFO] Created service: imagej.script.DefaultScriptService
[INFO] Created service: imagej.platform.DefaultAppEventService
[INFO] Configuring platform: imagej.platform.DefaultPlatform
[INFO] Created service: imagej.platform.DefaultPlatformService
[INFO] Created service: imagej.options.DefaultOptionsService
[INFO] Created service: org.scijava.event.DefaultEventHistory
[INFO] Created service: imagej.render.DummyRenderingService
[INFO] Created service: imagej.script.DefaultScriptService
[INFO] Created service: imagej.script.DummyService
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.083 sec
Running imagej.command.CommandServiceTest
[INFO] Created service: org.scijava.log.StderrLogService
[INFO] Created service: org.scijava.thread.DefaultThreadService
[INFO] Created service: org.scijava.event.DefaultEventService
[INFO] Found 40 plugins.
[INFO] Created service: org.scijava.plugin.DefaultPluginService
[INFO] Created service: imagej.module.DefaultModuleService
[INFO] Created service: imagej.command.DefaultCommandService
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.037 sec
Running imagej.util.UnitUtilsTest
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 sec
Running imagej.util.ColorRGBTest
Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.01 sec
Running imagej.util.PrefsTest
Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.006 sec
Results :
Tests run: 25, Failures: 0, Errors: 0, Skipped: 0
[INFO] [jar:jar {execution: default-jar}]
[INFO] Building jar: /data/devel/jenkins/jobs/ImageJ/workspace/core/core/target/ij-core-2.0.0-SNAPSHOT.jar
[INFO] Preparing source:jar
[WARNING] Removing: jar from forked lifecycle, to prevent recursive invocation.
[INFO] [imagej:set-rootdir {execution: set-rootdir}]
[INFO] [buildnumber:create {execution: default}]
[INFO] [source:jar {execution: default}]
[INFO] Building jar: /data/devel/jenkins/jobs/ImageJ/workspace/core/core/target/ij-core-2.0.0-SNAPSHOT-sources.jar
[INFO] [jar:test-jar {execution: default}]
[INFO] Building jar: /data/devel/jenkins/jobs/ImageJ/workspace/core/core/target/ij-core-2.0.0-SNAPSHOT-tests.jar
[INFO] [install:install {execution: default-install}]
[INFO] Installing /data/devel/jenkins/jobs/ImageJ/workspace/core/core/target/ij-core-2.0.0-SNAPSHOT.jar to /var/lib/jenkins/.m2/repository/net/imagej/ij-core/2.0.0-SNAPSHOT/ij-core-2.0.0-SNAPSHOT.jar
[INFO] Installing /data/devel/jenkins/jobs/ImageJ/workspace/core/core/target/ij-core-2.0.0-SNAPSHOT-sources.jar to /var/lib/jenkins/.m2/repository/net/imagej/ij-core/2.0.0-SNAPSHOT/ij-core-2.0.0-SNAPSHOT-sources.jar
[INFO] Installing /data/devel/jenkins/jobs/ImageJ/workspace/core/core/target/ij-core-2.0.0-SNAPSHOT-tests.jar to /var/lib/jenkins/.m2/repository/net/imagej/ij-core/2.0.0-SNAPSHOT/ij-core-2.0.0-SNAPSHOT-tests.jar
[INFO] [imagej:copy-jars {execution: copy-jars}]
[INFO] Property 'imagej.app.directory' unset; Skipping copy-jars
[INFO] ------------------------------------------------------------------------
[INFO] Building ImageJ Data Model
[INFO] task-segment: [clean, install]
[INFO] ------------------------------------------------------------------------
[INFO] [clean:clean {execution: default-clean}]
[INFO] [imagej:set-rootdir {execution: set-rootdir}]
[INFO] [buildnumber:create {execution: default}]
[debug] execute contextualize
[INFO] [resources:resources {execution: default-resources}]
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 39 resources
[INFO] [compiler:compile {execution: default-compile}]
[INFO] Compiling 178 source files to /data/devel/jenkins/jobs/ImageJ/workspace/core/data/target/classes
[INFO] -------------------------------------------------------------
[ERROR] COMPILATION ERROR :
[INFO] -------------------------------------------------------------
[ERROR] /data/devel/jenkins/jobs/ImageJ/workspace/core/data/src/main/java/imagej/data/DefaultDatasetService.java:[227,46] incompatible types; inferred type argument(s) java.lang.Object do not conform to bounds of type variable(s) T
found : <T>net.imglib2.img.ImgPlus<T>
required: net.imglib2.img.ImgPlus
[INFO] 1 error
[INFO] -------------------------------------------------------------
[INFO] ------------------------------------------------------------------------
[ERROR] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Compilation failure
/data/devel/jenkins/jobs/ImageJ/workspace/core/data/src/main/java/imagej/data/DefaultDatasetService.java:[227,46] incompatible types; inferred type argument(s) java.lang.Object do not conform to bounds of type variable(s) T
found : <T>net.imglib2.img.ImgPlus<T>
required: net.imglib2.img.ImgPlus
[INFO] ------------------------------------------------------------------------
[INFO] For more information, run Maven with the -e switch
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 15 seconds
[INFO] Finished at: Thu Jun 27 15:35:28 CDT 2013
[INFO] Final Memory: 85M/1474M
[INFO] ------------------------------------------------------------------------
Build step 'Invoke top-level Maven targets' marked build as failure
Archiving artifacts
Build step 'Groovy Postbuild' marked build as failure
Recording test results
Performance: No threshold configured for making the test unstable
Performance: No threshold configured for making the test failure
Performance: Recording JUnit reports '**/TEST-*.xml'
Performance: Parsing JUnit report file TEST-imagej.command.CommandServiceTest.xml
Performance: Parsing JUnit report file TEST-imagej.display.DisplayTest.xml
Performance: Parsing JUnit report file TEST-imagej.menu.ShadowMenuTest.xml
Performance: Parsing JUnit report file TEST-imagej.script.JavascriptTest.xml
Performance: Parsing JUnit report file TEST-imagej.util.ColorRGBTest.xml
Performance: Parsing JUnit report file TEST-imagej.util.PrefsTest.xml
Performance: Parsing JUnit report file TEST-imagej.util.UnitUtilsTest.xml
Performance: File TEST-imagej.command.CommandServiceTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.display.DisplayTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.menu.ShadowMenuTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.script.JavascriptTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.util.ColorRGBTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.util.PrefsTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-imagej.util.UnitUtilsTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
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