[ImageJ-builds] Build failed in Jenkins: fiji-core #705

Jenkins Daemon jenkins at qa.nest-initiative.org
Fri Apr 5 17:03:12 CDT 2013


See <https://qa.nest-initiative.org/job/fiji-core/705/changes>

Changes:

[Johannes Schindelin] Do not hard-code the scijava-common version in Build.sh

[Johannes Schindelin] Bump ImageJ2 yet again

------------------------------------------
Started by remote host 144.92.48.145
Building remotely on fc-18-i386-7 in workspace <https://qa.nest-initiative.org/job/fiji-core/ws/>
Checkout:fiji-core / <https://qa.nest-initiative.org/job/fiji-core/ws/> - hudson.remoting.Channel at 6a2ab65b:fc-18-i386-7
Using strategy: Default
Last Built Revision: Revision 28aef36532791fa02f7f6a4e58871af445b8b44d (origin/master)
Fetching changes from 1 remote Git repository
Fetching upstream changes from origin
Commencing build of Revision c4253dddd258416912834f466715df39c33c4a2f (origin/master)
Checking out Revision c4253dddd258416912834f466715df39c33c4a2f (origin/master)
Cleaning workspace
Resetting working tree
[fiji-core] $ /bin/bash /tmp/hudson485604642605927284.sh
+ ./Build.sh -Dminimaven.updateinterval=1 -- verbose=true
>From git://github.com/scijava/scijava-common
   4336758..aab7fb8  master     -> origin/master
>From git://github.com/scijava/scijava-common
 * [new tag]         scijava-common-1.0.0 -> scijava-common-1.0.0
Updating 4336758..aab7fb8
Fast-forward
 pom-scijava/pom.xml                                |   4 +-
 pom.xml                                            |  35 +++----
 src/main/java/org/scijava/Context.java             | 112 ++++-----------------
 src/main/java/org/scijava/app/AbstractApp.java     |  97 ++++++++++++++++++
 src/main/java/org/scijava/app/App.java             |  99 ++++++++++++++++++
 src/main/java/org/scijava/app/AppService.java      |  59 +++++++++++
 .../java/org/scijava/app/DefaultAppService.java    | 108 ++++++++++++++++++++
 .../{event => app}/DefaultStatusService.java       |  16 ++-
 src/main/java/org/scijava/app/SciJavaApp.java      |  66 ++++++++++++
 .../org/scijava/{event => app}/StatusService.java  |  13 ++-
 .../org/scijava/{ => app}/event/StatusEvent.java   |   4 +-
 .../java/org/scijava/input/InputModifiers.java     |   2 +-
 src/main/java/org/scijava/plugin/Attr.java         |   2 +-
 .../org/scijava/plugin/DefaultPluginFinder.java    |  43 ++++----
 .../org/scijava/plugin/DefaultPluginService.java   |  31 +++++-
 src/main/java/org/scijava/plugin/PluginFinder.java |  12 ++-
 src/main/java/org/scijava/plugin/PluginIndex.java  |  45 +++++++--
 17 files changed, 598 insertions(+), 150 deletions(-)
 create mode 100644 src/main/java/org/scijava/app/AbstractApp.java
 create mode 100644 src/main/java/org/scijava/app/App.java
 create mode 100644 src/main/java/org/scijava/app/AppService.java
 create mode 100644 src/main/java/org/scijava/app/DefaultAppService.java
 rename src/main/java/org/scijava/{event => app}/DefaultStatusService.java (88%)
 create mode 100644 src/main/java/org/scijava/app/SciJavaApp.java
 rename src/main/java/org/scijava/{event => app}/StatusService.java (86%)
 rename src/main/java/org/scijava/{ => app}/event/StatusEvent.java (98%)
Downloading sc.fiji:javac:2.0.0-SNAPSHOT
Downloading net.imagej:ij-minimaven:2.0.0-SNAPSHOT
Downloading net.imagej:ij-updater-ssh:2.0.0-SNAPSHOT
Looking at children of pom-fiji
Looking at children of pom-fiji-plugins
Compiling 26 files in <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/fiji-lib>
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Compiling 22 files in <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/pal-optimization>
Compiling 190 files in <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/VIB-lib>
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Compiling 121 files in <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Viewer>
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Compiling 35 files in <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/level_sets>
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Compiling 1 files in <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Blob_Segmentation>
Note: <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Blob_Segmentation/src/main/java/ij3d/segmentation/Blob_Segmentation_in_3D.java> uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Blob_Segmentation/src/main/java/ij3d/segmentation/Blob_Segmentation_in_3D.java> uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Compiling 4 files in <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Objects_Counter>
Note: <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/3D_Objects_Counter/src/main/java/Utilities/Counter3D.java> uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Compiling 3 files in <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/Algorithm_Launcher>
Note: <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/Algorithm_Launcher/src/main/java/AlgorithmInfo.java> uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Compiling 6 files in <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/AnalyzeSkeleton_>
Note: <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/AnalyzeSkeleton_/src/main/java/skeleton_analysis/AnalyzeSkeleton_.java> uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Compiling 2 files in <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/Analyze_Reader_Writer>
Compiling 1 files in <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/Anisotropic_Diffusion_2D>
Compiling 3 files in <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/Arrow_>
Compiling 2 files in <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/Auto_Threshold>
Compiling 8 files in <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/BalloonSegmentation_>
Note: <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/BalloonSegmentation_/src/main/java/BalloonSegmentation_.java> uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Compiling 26 files in <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/fiji-compat>
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Compiling 3 files in <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/fiji-scripting>
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Compiling 2 files in <https://qa.nest-initiative.org/job/fiji-core/ws/src-plugins/BeanShell_Interpreter>
Exception in thread "main" java.lang.NullPointerException
	at imagej.build.minimaven.MavenProject.findPOM(MavenProject.java:907)
	at imagej.build.minimaven.MavenProject.getDependencies(MavenProject.java:716)
	at imagej.build.minimaven.MavenProject.getDependencies(MavenProject.java:747)
	at imagej.build.minimaven.MavenProject.getDependencies(MavenProject.java:747)
	at imagej.build.minimaven.MavenProject.getDependencies(MavenProject.java:704)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:394)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:330)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:325)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:325)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:287)
	at imagej.build.MiniMaven.main(MiniMaven.java:138)
Looking at children of pom-fiji
Looking at children of pom-fiji-plugins
Exception in thread "main" java.lang.NullPointerException
	at imagej.build.minimaven.MavenProject.findPOM(MavenProject.java:907)
	at imagej.build.minimaven.MavenProject.getDependencies(MavenProject.java:716)
	at imagej.build.minimaven.MavenProject.getDependencies(MavenProject.java:747)
	at imagej.build.minimaven.MavenProject.getDependencies(MavenProject.java:747)
	at imagej.build.minimaven.MavenProject.getDependencies(MavenProject.java:704)
	at imagej.build.minimaven.MavenProject.checkUpToDate(MavenProject.java:194)
	at imagej.build.minimaven.MavenProject.upToDate(MavenProject.java:179)
	at imagej.build.minimaven.MavenProject.build(MavenProject.java:388)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:330)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:325)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:325)
	at imagej.build.minimaven.MavenProject.buildAndInstall(MavenProject.java:287)
	at imagej.build.MiniMaven.main(MiniMaven.java:138)
Build step 'Execute shell' marked build as failure



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