[ImageJ-builds] Build failed in Jenkins: fiji-windows-full #352

[Jenkins Daemon]

See <https://qa.nest-initiative.org/job/fiji-windows-full/352/>

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Started by user Johannes Schindelin
Building remotely on windows-7-pro-x86_64 in workspace <https://qa.nest-initiative.org/job/fiji-windows-full/ws/>
Checkout:fiji-windows-full / <https://qa.nest-initiative.org/job/fiji-windows-full/ws/> - hudson.remoting.Channel at 44f3fa6f:windows-7-pro-x86_64
Using strategy: Default
Last Built Revision: Revision bf2a1605b5992905f21ea06677f21905e322c385 (origin/master)
Cloning the remote Git repository
Cloning repository git://github.com/fiji/fiji
git --version
git version 1.7.9.msysgit.0.390.g01fca
Fetching upstream changes from origin
Cleaning workspace
Resetting working tree
Commencing build of Revision bf2a1605b5992905f21ea06677f21905e322c385 (origin/master)
Checking out Revision bf2a1605b5992905f21ea06677f21905e322c385 (origin/master)
Cleaning workspace
Resetting working tree
[fiji-windows-full] $ sh -xe C:\Users\jenkins\AppData\Local\Temp\hudson2711304064730842198.sh
+ grep 'StrictHostKeyChecking no' /etc/ssh/ssh_config
    StrictHostKeyChecking no
[fiji-windows-full] $ sh -xe C:\Users\jenkins\AppData\Local\Temp\hudson7720031477433905809.sh
+ export PATH=/bin:/mingw/bin:/c/Windows/system32:/c/Windows:/c/Windows/System32/Wbem:/c/Windows/System32/WindowsPowerShell/v1.0/:/usr/bin:/usr/mingw/bin
+ PATH=/bin:/mingw/bin:/c/Windows/system32:/c/Windows:/c/Windows/System32/Wbem:/c/Windows/System32/WindowsPowerShell/v1.0/:/usr/bin:/usr/mingw/bin
+ git config --system core.autocrlf false
+ git config core.autocrlf false
+ git reset --hard
HEAD is now at bf2a160 Clojure cannot be built with MiniMaven; remove it
+ git submodule foreach 'git config core.autocrlf false'
+ git submodule foreach 'git reset --hard'
+ git submodule init
Submodule 'java/linux' (http://fiji.sc/java/linux.git) registered for path 'java/linux'
Submodule 'java/linux-amd64' (http://fiji.sc/java/linux-amd64.git) registered for path 'java/linux-amd64'
Submodule 'java/macosx-java3d' (http://fiji.sc/java/macosx-java3d.git) registered for path 'java/macosx-java3d'
Submodule 'java/win32' (http://fiji.sc/java/win32.git) registered for path 'java/win32'
Submodule 'java/win64' (http://fiji.sc/java/win64.git) registered for path 'java/win64'
Submodule 'AutoComplete' (http://fiji.sc/AutoComplete/.git) registered for path 'modules/AutoComplete'
Submodule 'ImageJA' (git://github.com/fiji/ImageJA) registered for path 'modules/ImageJA'
Submodule 'RSyntaxTextArea' (http://fiji.sc/RSyntaxTextArea/.git) registered for path 'modules/RSyntaxTextArea'
Submodule 'Retrotranslator' (http://fiji.sc/Retrotranslator/.git) registered for path 'modules/Retrotranslator'
Submodule 'TrakEM2' (ssh://mob@repo.or.cz/srv/git/trakem2.git) registered for path 'modules/TrakEM2'
Submodule 'batik' (http://fiji.sc/batik/.git) registered for path 'modules/batik'
Submodule 'commons-math' (http://fiji.sc/commons-math/.git) registered for path 'modules/commons-math'
Submodule 'ij-plugins' (http://fiji.sc/ij-plugins/.git) registered for path 'modules/ij-plugins'
Submodule 'imagej5d' (http://fiji.sc/image5d.git) registered for path 'modules/image5d'
Submodule 'imagej2' (git://github.com/imagej/imagej) registered for path 'modules/imagej2'
Submodule 'imglib' (git://github.com/imagej/imglib) registered for path 'modules/imglib'
Submodule 'javassist' (http://fiji.sc/javassist/.git) registered for path 'modules/javassist'
Submodule 'jsch' (http://fiji.sc/jsch/.git) registered for path 'modules/jsch'
Submodule 'junit' (http://fiji.sc/junit/.git) registered for path 'modules/junit'
Submodule 'jython' (http://fiji.sc/jython/.git) registered for path 'modules/jython'
Submodule 'mpicbg' (http://fiji.sc/mpicbg.git) registered for path 'modules/mpicbg'
Submodule 'tcljava' (http://fiji.sc/tcljava/.git) registered for path 'modules/tcljava'
Submodule 'weka' (http://fiji.sc/weka/.git) registered for path 'modules/weka'
+ git submodule sync
Synchronizing submodule url for 'java/linux'
Synchronizing submodule url for 'java/linux-amd64'
Synchronizing submodule url for 'java/macosx-java3d'
Synchronizing submodule url for 'java/win32'
Synchronizing submodule url for 'java/win64'
Synchronizing submodule url for 'AutoComplete'
Synchronizing submodule url for 'ImageJA'
Synchronizing submodule url for 'RSyntaxTextArea'
Synchronizing submodule url for 'Retrotranslator'
Synchronizing submodule url for 'TrakEM2'
Synchronizing submodule url for 'batik'
Synchronizing submodule url for 'commons-math'
Synchronizing submodule url for 'ij-plugins'
Synchronizing submodule url for 'imagej5d'
Synchronizing submodule url for 'imagej2'
Synchronizing submodule url for 'imglib'
Synchronizing submodule url for 'javassist'
Synchronizing submodule url for 'jsch'
Synchronizing submodule url for 'junit'
Synchronizing submodule url for 'jython'
Synchronizing submodule url for 'mpicbg'
Synchronizing submodule url for 'tcljava'
Synchronizing submodule url for 'weka'
++ git ls-files --stage
++ sed -n 's/^160000 .\{40\} 0.//p'
++ grep -v java/
+ SUBMODULES='modules/AutoComplete
modules/ImageJA
modules/RSyntaxTextArea
modules/Retrotranslator
modules/TrakEM2
modules/batik
modules/commons-math
modules/ij-plugins
modules/image5d
modules/imagej2
modules/imglib
modules/javassist
modules/jsch
modules/junit
modules/jython
modules/mpicbg
modules/tcljava
modules/weka'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/AutoComplete
Submodule 'AutoComplete' () registered for path 'modules/AutoComplete'
Cloning into 'modules/AutoComplete'...
Submodule path 'modules/AutoComplete': checked out 'bbff1fd4545b3a614b14eb0770ac6028b648746d'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/ImageJA
Submodule 'ImageJA' () registered for path 'modules/ImageJA'
Cloning into 'modules/ImageJA'...
Submodule path 'modules/ImageJA': checked out '740c72e2e4ca40f0a2041933c25a453930039ac3'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/RSyntaxTextArea
Submodule 'RSyntaxTextArea' () registered for path 'modules/RSyntaxTextArea'
Cloning into 'modules/RSyntaxTextArea'...
fatal: reference is not a tree: 1741ece3d827d55a3782eb40af39ce58901abffc
Unable to checkout '1741ece3d827d55a3782eb40af39ce58901abffc' in submodule path 'modules/RSyntaxTextArea'
Build step 'Execute shell' marked build as failure