[ImageJ-builds] Build failed in Jenkins: fiji-full #682

[Jenkins Daemon]

See <https://qa.nest-initiative.org/job/fiji-full/682/>

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Started by user Johannes Schindelin
Building remotely on fc-18-i386-8 in workspace <https://qa.nest-initiative.org/job/fiji-full/ws/>
Checkout:fiji-full / <https://qa.nest-initiative.org/job/fiji-full/ws/> - hudson.remoting.Channel at 31056a6d:fc-18-i386-8
Using strategy: Default
Last Built Revision: Revision bf2a1605b5992905f21ea06677f21905e322c385 (origin/master)
Fetching changes from 1 remote Git repository
Fetching upstream changes from origin
Commencing build of Revision bf2a1605b5992905f21ea06677f21905e322c385 (origin/master)
Checking out Revision bf2a1605b5992905f21ea06677f21905e322c385 (origin/master)
Cleaning workspace
Resetting working tree
[fiji-full] $ /bin/bash /tmp/hudson3190792793437915122.sh
+ git submodule init
+ git submodule sync
Synchronizing submodule url for 'java/linux'
Synchronizing submodule url for 'java/linux-amd64'
Synchronizing submodule url for 'java/macosx-java3d'
Synchronizing submodule url for 'java/win32'
Synchronizing submodule url for 'java/win64'
Synchronizing submodule url for 'modules/AutoComplete'
Synchronizing submodule url for 'modules/ImageJA'
Synchronizing submodule url for 'modules/RSyntaxTextArea'
Synchronizing submodule url for 'modules/Retrotranslator'
Synchronizing submodule url for 'modules/TrakEM2'
Synchronizing submodule url for 'modules/batik'
Synchronizing submodule url for 'modules/commons-math'
Synchronizing submodule url for 'modules/ij-plugins'
Synchronizing submodule url for 'modules/image5d'
Synchronizing submodule url for 'modules/imagej2'
Synchronizing submodule url for 'modules/imglib'
Synchronizing submodule url for 'modules/javassist'
Synchronizing submodule url for 'modules/jsch'
Synchronizing submodule url for 'modules/junit'
Synchronizing submodule url for 'modules/jython'
Synchronizing submodule url for 'modules/mpicbg'
Synchronizing submodule url for 'modules/tcljava'
Synchronizing submodule url for 'modules/weka'
++ grep -v java/
++ sed -n 's/^160000 .\{40\} 0.//p'
++ git ls-files --stage
+ SUBMODULES='modules/AutoComplete
modules/ImageJA
modules/RSyntaxTextArea
modules/Retrotranslator
modules/TrakEM2
modules/batik
modules/commons-math
modules/ij-plugins
modules/image5d
modules/imagej2
modules/imglib
modules/javassist
modules/jsch
modules/junit
modules/jython
modules/mpicbg
modules/tcljava
modules/weka'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/AutoComplete
Cloning into 'modules/AutoComplete'...
Submodule path 'modules/AutoComplete': checked out 'bbff1fd4545b3a614b14eb0770ac6028b648746d'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/ImageJA
Cloning into 'modules/ImageJA'...
Submodule path 'modules/ImageJA': checked out '740c72e2e4ca40f0a2041933c25a453930039ac3'
+ for i in '$SUBMODULES'
+ git submodule update --init -- modules/RSyntaxTextArea
Cloning into 'modules/RSyntaxTextArea'...
fatal: reference is not a tree: 1741ece3d827d55a3782eb40af39ce58901abffc
Unable to checkout '1741ece3d827d55a3782eb40af39ce58901abffc' in submodule path 'modules/RSyntaxTextArea'
Build step 'Execute shell' marked build as failure