[ImageJ-builds] Build failed in Jenkins: ImgLib #1183

jenkins at imagej.net jenkins at imagej.net
Thu Sep 27 11:25:43 CDT 2012


See <http://jenkins.imagej.net/job/ImgLib/1183/changes>

Changes:

[Tobias Pietzsch] created pom

[Tobias Pietzsch] examples from "Getting Started" tutorial.

[Tobias Pietzsch] graffiti.tif for getting started tutorial.

[Tobias Pietzsch] examples for RandomAccess tutorial.

[Tobias Pietzsch] added examples for Cursor tutorial.

[Tobias Pietzsch] procedural generated Mandelbrot RealRandomAccessible.

[Tobias Pietzsch] adapted to modified abstract class hierarchy.

[Tobias Pietzsch] added javadoc and cleaned up

[Stephan Saalfeld] added MandelbrotViewer, dragging the mouse with Shift pans the canvas,

[Stephan Saalfeld] added scale method to AffineTransform3D

[Stephan Saalfeld] renamed viewer examples

[Stephan Saalfeld] extended 3d rotation example by scaling and shifting using the mouse

[Stephan Saalfeld] added julia set example

[Stephan Saalfeld] Added a first 2d CATMAIDRandomAccessible trial and a preliminary example

[Stephan Saalfeld] made CATMAIDRandomAccessible 3D and an Interval

[Stephan Saalfeld] Created a simple cache using a HashMap on SoftReferences for

[Tobias Pietzsch] removed un-used code.

[Tobias Pietzsch] add ImgLib2-logo overlay for interactive examples.

[Tobias Pietzsch] added logo pngs

[Stephan Saalfeld] Added example image for Img2DViewerExample.

[Tobias Pietzsch] handle the case that there is no ImageJ instance.

[Tobias Pietzsch] RandomAccessibleViewer2D should do something similar to Image2DViewerExample.

[Tobias Pietzsch] copied over AbstractInteractiveExample etc from test package, will be modified step by step.

[Tobias Pietzsch] factored out LogoPainter. move toggleInterpolation() out of MappingThread.

[Tobias Pietzsch] removed extension of PlugIn interface.

[Tobias Pietzsch] re-ordered fields and added some comments.

[Tobias Pietzsch] removed un-used member "img"

[Tobias Pietzsch] move key-released handling to AbstractIntervactive2DViewer.

[Tobias Pietzsch] removed nonsense SHIFT and CTRL handling

[Tobias Pietzsch] removed un-used constructor

[Tobias Pietzsch] make keyModifiedSpeed static and added javadoc

[Tobias Pietzsch] move ColorProcessor to Img2DViewerExample

[Tobias Pietzsch] initialize rotationList in AbstractInteractive2DViewer

[Tobias Pietzsch] move GUI to separate class (maybe this will be reverted later)

[Tobias Pietzsch] Moved event handling to separate class TransformEventHandler2D.

[Tobias Pietzsch] move construction of gui, painter, and imp into AbstractInteractive2DViewer.

[Tobias Pietzsch] AbstractInteractive2DViewer is no longer abstract. Img2DViewerExample doesn't extend it but instantiates it.

[Stephan Saalfeld] re-added toggleInterpolation() as interface method of TransformListener

[Tobias Pietzsch] made ARGBScreenImage extend ArrayImg instead of keeping one.

[Tobias Pietzsch] moved most of the functionality into AbstractInteractive2DViewer.

[Tobias Pietzsch] renamed AbstractInteractive2DViewer to Interactive2DViewer.

[Stephan Saalfeld] use smaller logo

[Tobias Pietzsch] added benchmarks to compare XYProjector and XYRandomAccessibleProjector.

[Stephan Saalfeld] added mandelbulb and mandelbox fractal variants, non of them completely

[Stephan Saalfeld] use smaller logo

[Stephan Saalfeld] catmaid loading from localhost based server

[Tobias Pietzsch] show projector rendering time.

[Tobias Pietzsch] clean up TransformEventHandler2D.

[Tobias Pietzsch] Interactive3DViewer and example.

[Tobias Pietzsch] moved interactive viewers to gui package.

[Tobias Pietzsch] added two static convenience methods to create Intervals.

[Tobias Pietzsch] cleaning up.

[Tobias Pietzsch] removed unused parameter in AbstractOutOfBoundsValue constructor

[Tobias Pietzsch] fixed a bug in OutOfBoundsValue.

[Tobias Pietzsch] replaced looping move() implementations in AbstractOutOfBounds by a setPosition.

[Tobias Pietzsch] some convenience methods similar to ImageJFunctions.show() using Interactive2DViewer.

[Tobias Pietzsch] temp

[Tobias Pietzsch] start() the painter thread instead of execute run() in our own thread.

[Tobias Pietzsch] use NumericType<T> instead RealType<T> & NativeType<T>.

[Tobias Pietzsch] creating/loading imgs. using accessors.

[Tobias Pietzsch] adapted Stephan Saalfelds Bee example.

[Tobias Pietzsch] System.exit() when viewer closes.

[Stephan Saalfeld] juliasets got their own accessible

[Stephan Saalfeld] julia examples use the accessible

[Stephan Saalfeld] start thread instead of running it

[Stephan Saalfeld] GUI takes a Colleciton of Event Handlers

[Tobias Pietzsch] added read/write converter to the Bee example.

[Tobias Pietzsch] clean up Mandelbrot example

[Stephan Saalfeld] added NNSearch2DViewerExample

[Tobias Pietzsch] added constructor without handler Collection

[Tobias Pietzsch] added sparse data interpolation examples

[Tobias Pietzsch] temporary changes for the demonstration

[Tobias Pietzsch] modified GUI so that handlers can be added at any time

[Tobias Pietzsch] use addHandler() method in interactive viewers instead of passing collection of handlers in the constructor.

[Tobias Pietzsch] added keys to TransformEventHandler3D: R - reset transformation, UP/DOWN - zoom in/out.

[Tobias Pietzsch] several performance tweaks for ComponentTree:

[Tobias Pietzsch] ComponentTree speedup: move visitedRandomAccess when moving neighbor access.

[Tobias Pietzsch] moved tutorial into examples package

[Tobias Pietzsch] make AbstractXYProjector extend Point to avoid reimplementing Localizable and Positionable.

[Tobias Pietzsch] speed up XYRandomAccessibleProjector.

[Tobias Pietzsch] implemented Concatenable<AffineGet> and PreConcatenable<AffineGet> for AffineTransform and AffineTransform3D.

[Tobias Pietzsch] added method to reset AffineTransform3D to identity.

[Tobias Pietzsch] Be more specific in RGBAScreenImage: use BufferedImage instead of Image

[Tobias Pietzsch] create new subproject "imglib2-ui" for basic interactive image viewers.

[Tobias Pietzsch] ui: add MouseWheelListeners to the canvas instead of the window

[Tobias Pietzsch] Revised interactive viewers and put them into imglib2-ui.

[Tobias Pietzsch] Converted all the interactive examples to use imglib2-ui viewers.

[Tobias Pietzsch] update Bee example to use imglib2-ui viewers

[Tobias Pietzsch] CATMAIDRandomAccessibleInterval: clear cache by finalize instead of

[Tobias Pietzsch] moved interactive examples to imglib2-examples project, added README.txt and imglib2 logo.

[Tobias Pietzsch] removed some unfinished example stuff that should not go into master...

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[INFO] Unable to find resource 'net.imglib2:imglib2:test-jar:tests:2.0.0-SNAPSHOT' in repository imagej.releases (http://maven.imagej.net/content/repositories/releases)
Downloading: http://maven.imagej.net/content/repositories/snapshots/net/imglib2/imglib2/2.0.0-SNAPSHOT/imglib2-2.0.0-SNAPSHOT-tests.jar
[INFO] Unable to find resource 'net.imglib2:imglib2:test-jar:tests:2.0.0-SNAPSHOT' in repository imagej.snapshots (http://maven.imagej.net/content/repositories/snapshots)
Downloading: http://dev.loci.wisc.edu/maven2/releases/net/imglib2/imglib2/2.0.0-SNAPSHOT/imglib2-2.0.0-SNAPSHOT-tests.jar
[INFO] Unable to find resource 'net.imglib2:imglib2:test-jar:tests:2.0.0-SNAPSHOT' in repository loci.releases (http://dev.loci.wisc.edu/maven2/releases)
Downloading: http://dev.loci.wisc.edu/maven2/snapshots/net/imglib2/imglib2/2.0.0-SNAPSHOT/imglib2-2.0.0-SNAPSHOT-tests.jar
[INFO] Unable to find resource 'net.imglib2:imglib2:test-jar:tests:2.0.0-SNAPSHOT' in repository loci.snapshots (http://dev.loci.wisc.edu/maven2/snapshots)
Downloading: http://maven.imagej.net/content/repositories/thirdparty/net/imglib2/imglib2/2.0.0-SNAPSHOT/imglib2-2.0.0-SNAPSHOT-tests.jar
[INFO] Unable to find resource 'net.imglib2:imglib2:test-jar:tests:2.0.0-SNAPSHOT' in repository imagej.thirdparty (http://maven.imagej.net/content/repositories/thirdparty)
Downloading: http://download.java.net/maven/2/net/imglib2/imglib2/2.0.0-SNAPSHOT/imglib2-2.0.0-SNAPSHOT-tests.jar
[INFO] Unable to find resource 'net.imglib2:imglib2:test-jar:tests:2.0.0-SNAPSHOT' in repository java.net (http://download.java.net/maven/2)
[INFO] ------------------------------------------------------------------------
[ERROR] BUILD ERROR
[INFO] ------------------------------------------------------------------------
[INFO] Failed to resolve artifact.

Missing:
----------
1) net.imglib2:imglib2:test-jar:tests:2.0.0-SNAPSHOT

  Try downloading the file manually from the project website.

  Then, install it using the command: 
      mvn install:install-file -DgroupId=net.imglib2 -DartifactId=imglib2 -Dversion=2.0.0-SNAPSHOT -Dclassifier=tests -Dpackaging=test-jar -Dfile=/path/to/file

  Alternatively, if you host your own repository you can deploy the file there: 
      mvn deploy:deploy-file -DgroupId=net.imglib2 -DartifactId=imglib2 -Dversion=2.0.0-SNAPSHOT -Dclassifier=tests -Dpackaging=test-jar -Dfile=/path/to/file -Durl=[url] -DrepositoryId=[id]

  Path to dependency: 
  	1) net.imglib2:imglib2-tests:jar:2.0.0-SNAPSHOT
  	2) net.imglib2:imglib2:test-jar:tests:2.0.0-SNAPSHOT

----------
1 required artifact is missing.

for artifact: 
  net.imglib2:imglib2-tests:jar:2.0.0-SNAPSHOT

from the specified remote repositories:
  imagej.releases (http://maven.imagej.net/content/repositories/releases),
  central (http://repo1.maven.org/maven2),
  loci.releases (http://dev.loci.wisc.edu/maven2/releases),
  imagej.snapshots (http://maven.imagej.net/content/repositories/snapshots),
  java.net (http://download.java.net/maven/2),
  loci.snapshots (http://dev.loci.wisc.edu/maven2/snapshots),
  imagej.thirdparty (http://maven.imagej.net/content/repositories/thirdparty)



[INFO] ------------------------------------------------------------------------
[INFO] For more information, run Maven with the -e switch
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 2 minutes 27 seconds
[INFO] Finished at: Thu Sep 27 11:25:42 CDT 2012
[INFO] Final Memory: 99M/1441M
[INFO] ------------------------------------------------------------------------
Build step 'Invoke top-level Maven targets' marked build as failure
Archiving artifacts
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Performance: File TEST-tests.labeling.LabelingOutOfBoundsTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-tests.labeling.LabelingTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-tests.labeling.SparseLabelingTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-tests.roi.TestAbstractRegionOfInterest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.img.ImagePlusAdapterTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.img.ImgTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.io.img.virtual.VirtualImgTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.example.Example10Test.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.example.Example11Test.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.example.Example12Test.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.example.Example1Test.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.example.Example2Test.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.example.Example3Test.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.example.Example4Test.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.example.Example5Test.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.example.Example6Test.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.example.Example7Test.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.example.Example8Test.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.example.Example9Test.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.operation.binary.bool.BinaryAndNotTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.operation.binary.bool.BinaryXorTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.operation.binary.complex.ComplexAddTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.operation.binary.complex.ComplexAvgTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.operation.binary.complex.ComplexCopyLeftTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.operation.binary.complex.ComplexCopyRightTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.operation.binary.complex.ComplexDifferenceTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.operation.binary.complex.ComplexDivideTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.operation.binary.complex.ComplexMultiplyTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.operation.binary.complex.ComplexPowerTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.operation.binary.complex.ComplexSubtractTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.operation.unary.complex.ComplexExpTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.operation.unary.complex.ComplexIntegerPowerTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.operation.unary.complex.ComplexLogTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-net.imglib2.ops.operation.unary.complex.ComplexReciprocalTest.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-script.imglib.test.TestBufferedImageImg.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-script.imglib.test.TestExtend.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-script.imglib.test.TestIntegralImage.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-script.imglib.test.TestIntegralImagePerformance.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-script.imglib.test.TestReduce.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE
Performance: File TEST-script.imglib.test.TestTransformations.xml reported 0.0% of errors [SUCCESS]. Build status is: FAILURE



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