[ImageJ-builds] Build failed in Jenkins: fiji-windows-full #188
Jenkins Daemon
jenkins at qa.nest-initiative.org
Fri Oct 26 03:14:03 CDT 2012
See <https://qa.nest-initiative.org/job/fiji-windows-full/188/changes>
Changes:
[cmbruns] Initial version of Vaa3D reader.
[cmbruns] Corrected PBD16 reader for annoying java signed behavior. Unsigned shift operator is not enough.
[cmbruns] Turned off explicit Vaa3D reader plugin menu
[cmbruns] Modify the plugin "Vaa3d Reader"
[cmbruns] Modify the plugin "Vaa3d Reader"
[cmbruns] Add status messages to Vaa3d_Reader plugin
[cmbruns] Wrap Vaa3d HandleExtraFileTypes stanza in try{} for extra safety.
[johannes.schindelin] Adjust the plugins.config for Vaa3D reader
------------------------------------------
[...truncated 1167 lines...]
Compiling 19 files in C:\jenkins\workspace\fiji-windows-full\src-plugins\Siox_Segmentation
[-source, 1.5, -target, 1.5, -classpath, C:\jenkins\workspace\fiji-windows-full\src-plugins\Siox_Segmentation\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\fiji-lib\target\fiji-lib-2.0.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar,> -d, C:\jenkins\workspace\fiji-windows-full\src-plugins\Siox_Segmentation\target\classes, C:\jenkins\workspace\fiji-windows-full\src-plugins\Siox_Segmentation\src\main\java\org\siox\ColorSignature.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Siox_Segmentation\src\main\java\org\siox\example\ControlJPanel.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Siox_Segmentation\src\main\java\org\siox\example\CursorFactory.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Siox_Segmentation\src\main\java\org\siox\example\ExtensionFileFilter.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Siox_Segmentation\src\main\java\org\siox\example\ImagePane.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Siox_Segmentation\src\main\java\org\siox\example\JRuler.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Siox_Segmentation\src\main\java\org\siox\example\Main.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Siox_Segmentation\src\main\java\org\siox\example\ScrollDisplay.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Siox_Segmentation\src\main\java\org\siox\SioxSegmentator.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Siox_Segmentation\src\main\java\org\siox\util\IntArrayList.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Siox_Segmentation\src\main\java\org\siox\util\IntHashMap.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Siox_Segmentation\src\main\java\org\siox\util\Utils.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Siox_Segmentation\src\main\java\siox\ControlJPanel.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Siox_Segmentation\src\main\java\siox\ImageOverlay.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Siox_Segmentation\src\main\java\siox\Load_Segmentation.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Siox_Segmentation\src\main\java\siox\RoiOverlay.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Siox_Segmentation\src\main\java\siox\SegmentationGUI.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Siox_Segmentation\src\main\java\siox\SegmentationInfo.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Siox_Segmentation\src\main\java\siox\Siox_Segmentation.java]
using the class path: C:\jenkins\workspace\fiji-windows-full\src-plugins\Siox_Segmentation\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\fiji-lib\target\fiji-lib-2.0.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar>
Note: C:\jenkins\workspace\fiji-windows-full\src-plugins\Siox_Segmentation\src\main\java\org\siox\example\ControlJPanel.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Snakuscule_ not up-to-date because 5 source files are not up-to-date (C:\jenkins\workspace\fiji-windows-full\src-plugins\Snakuscule_\src\main\java\snake2D\Snake2D.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Snakuscule_\src\main\java\snake2D\Snake2DKeeper.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Snakuscule_\src\main\java\snake2D\Snake2DNode.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Snakuscule_\src\main\java\snake2D\Snake2DScale.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Snakuscule_\src\main\java\Snakuscule_.java)
Compiling 5 files in C:\jenkins\workspace\fiji-windows-full\src-plugins\Snakuscule_
[-source, 1.5, -target, 1.5, -classpath, C:\jenkins\workspace\fiji-windows-full\src-plugins\Snakuscule_\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar,> -d, C:\jenkins\workspace\fiji-windows-full\src-plugins\Snakuscule_\target\classes, C:\jenkins\workspace\fiji-windows-full\src-plugins\Snakuscule_\src\main\java\snake2D\Snake2D.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Snakuscule_\src\main\java\snake2D\Snake2DKeeper.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Snakuscule_\src\main\java\snake2D\Snake2DNode.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Snakuscule_\src\main\java\snake2D\Snake2DScale.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Snakuscule_\src\main\java\Snakuscule_.java]
using the class path: C:\jenkins\workspace\fiji-windows-full\src-plugins\Snakuscule_\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar>
Note: C:\jenkins\workspace\fiji-windows-full\src-plugins\Snakuscule_\src\main\java\snake2D\Snake2DKeeper.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
SplineDeformationGenerator_ not up-to-date because 1 source files are not up-to-date (C:\jenkins\workspace\fiji-windows-full\src-plugins\SplineDeformationGenerator_\src\main\java\SplineDeformationGenerator\SplineDeformationGenerator_.java)
Compiling 1 files in C:\jenkins\workspace\fiji-windows-full\src-plugins\SplineDeformationGenerator_
[-source, 1.5, -target, 1.5, -classpath, C:\jenkins\workspace\fiji-windows-full\src-plugins\SplineDeformationGenerator_\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar,> -d, C:\jenkins\workspace\fiji-windows-full\src-plugins\SplineDeformationGenerator_\target\classes, C:\jenkins\workspace\fiji-windows-full\src-plugins\SplineDeformationGenerator_\src\main\java\SplineDeformationGenerator\SplineDeformationGenerator_.java]
using the class path: C:\jenkins\workspace\fiji-windows-full\src-plugins\SplineDeformationGenerator_\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar>
Note: C:\jenkins\workspace\fiji-windows-full\src-plugins\SplineDeformationGenerator_\src\main\java\SplineDeformationGenerator\SplineDeformationGenerator_.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: C:\jenkins\workspace\fiji-windows-full\src-plugins\SplineDeformationGenerator_\src\main\java\SplineDeformationGenerator\SplineDeformationGenerator_.java uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
StackReg_ not up-to-date because 1 source files are not up-to-date (C:\jenkins\workspace\fiji-windows-full\src-plugins\StackReg_\src\main\java\StackReg_.java)
Compiling 1 files in C:\jenkins\workspace\fiji-windows-full\src-plugins\StackReg_
[-source, 1.5, -target, 1.5, -classpath, C:\jenkins\workspace\fiji-windows-full\src-plugins\StackReg_\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar,> -d, C:\jenkins\workspace\fiji-windows-full\src-plugins\StackReg_\target\classes, C:\jenkins\workspace\fiji-windows-full\src-plugins\StackReg_\src\main\java\StackReg_.java]
using the class path: C:\jenkins\workspace\fiji-windows-full\src-plugins\StackReg_\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar>
C:\jenkins\workspace\fiji-windows-full\src-plugins\StackReg_\src\main\java\StackReg_.java:1099: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Class<?> for a varargs call
cast to java.lang.Class<?>[] for a non-varargs call and to suppress this warning
method = turboReg.getClass().getMethod("getSourcePoints", null);
^
C:\jenkins\workspace\fiji-windows-full\src-plugins\StackReg_\src\main\java\StackReg_.java:1100: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Object for a varargs call
cast to java.lang.Object[] for a non-varargs call and to suppress this warning
sourcePoints = ((double[][])method.invoke(turboReg, null));
^
C:\jenkins\workspace\fiji-windows-full\src-plugins\StackReg_\src\main\java\StackReg_.java:1101: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Class<?> for a varargs call
cast to java.lang.Class<?>[] for a non-varargs call and to suppress this warning
method = turboReg.getClass().getMethod("getTargetPoints", null);
^
C:\jenkins\workspace\fiji-windows-full\src-plugins\StackReg_\src\main\java\StackReg_.java:1102: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Object for a varargs call
cast to java.lang.Object[] for a non-varargs call and to suppress this warning
targetPoints = ((double[][])method.invoke(turboReg, null));
^
C:\jenkins\workspace\fiji-windows-full\src-plugins\StackReg_\src\main\java\StackReg_.java:1356: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Class<?> for a varargs call
cast to java.lang.Class<?>[] for a non-varargs call and to suppress this warning
method = turboRegR.getClass().getMethod("getTransformedImage", null);
^
C:\jenkins\workspace\fiji-windows-full\src-plugins\StackReg_\src\main\java\StackReg_.java:1357: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Object for a varargs call
cast to java.lang.Object[] for a non-varargs call and to suppress this warning
transformedSourceR = (ImagePlus)method.invoke(turboRegR, null);
^
C:\jenkins\workspace\fiji-windows-full\src-plugins\StackReg_\src\main\java\StackReg_.java:1358: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Class<?> for a varargs call
cast to java.lang.Class<?>[] for a non-varargs call and to suppress this warning
method = turboRegG.getClass().getMethod("getTransformedImage", null);
^
C:\jenkins\workspace\fiji-windows-full\src-plugins\StackReg_\src\main\java\StackReg_.java:1359: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Object for a varargs call
cast to java.lang.Object[] for a non-varargs call and to suppress this warning
transformedSourceG = (ImagePlus)method.invoke(turboRegG, null);
^
C:\jenkins\workspace\fiji-windows-full\src-plugins\StackReg_\src\main\java\StackReg_.java:1360: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Class<?> for a varargs call
cast to java.lang.Class<?>[] for a non-varargs call and to suppress this warning
method = turboRegB.getClass().getMethod("getTransformedImage", null);
^
C:\jenkins\workspace\fiji-windows-full\src-plugins\StackReg_\src\main\java\StackReg_.java:1361: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Object for a varargs call
cast to java.lang.Object[] for a non-varargs call and to suppress this warning
transformedSourceB = (ImagePlus)method.invoke(turboRegB, null);
^
C:\jenkins\workspace\fiji-windows-full\src-plugins\StackReg_\src\main\java\StackReg_.java:1621: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Class<?> for a varargs call
cast to java.lang.Class<?>[] for a non-varargs call and to suppress this warning
method = turboRegR.getClass().getMethod("getTransformedImage", null);
^
C:\jenkins\workspace\fiji-windows-full\src-plugins\StackReg_\src\main\java\StackReg_.java:1622: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Object for a varargs call
cast to java.lang.Object[] for a non-varargs call and to suppress this warning
transformedSourceR = (ImagePlus)method.invoke(turboRegR, null);
^
C:\jenkins\workspace\fiji-windows-full\src-plugins\StackReg_\src\main\java\StackReg_.java:1623: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Class<?> for a varargs call
cast to java.lang.Class<?>[] for a non-varargs call and to suppress this warning
method = turboRegG.getClass().getMethod("getTransformedImage", null);
^
C:\jenkins\workspace\fiji-windows-full\src-plugins\StackReg_\src\main\java\StackReg_.java:1624: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Object for a varargs call
cast to java.lang.Object[] for a non-varargs call and to suppress this warning
transformedSourceG = (ImagePlus)method.invoke(turboRegG, null);
^
C:\jenkins\workspace\fiji-windows-full\src-plugins\StackReg_\src\main\java\StackReg_.java:1625: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Class<?> for a varargs call
cast to java.lang.Class<?>[] for a non-varargs call and to suppress this warning
method = turboRegB.getClass().getMethod("getTransformedImage", null);
^
C:\jenkins\workspace\fiji-windows-full\src-plugins\StackReg_\src\main\java\StackReg_.java:1626: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Object for a varargs call
cast to java.lang.Object[] for a non-varargs call and to suppress this warning
transformedSourceB = (ImagePlus)method.invoke(turboRegB, null);
^
C:\jenkins\workspace\fiji-windows-full\src-plugins\StackReg_\src\main\java\StackReg_.java:1758: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Class<?> for a varargs call
cast to java.lang.Class<?>[] for a non-varargs call and to suppress this warning
method = turboReg.getClass().getMethod("getTransformedImage", null);
^
C:\jenkins\workspace\fiji-windows-full\src-plugins\StackReg_\src\main\java\StackReg_.java:1759: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Object for a varargs call
cast to java.lang.Object[] for a non-varargs call and to suppress this warning
ImagePlus transformedSource = (ImagePlus)method.invoke(turboReg, null);
^
18 warnings
Stack_Manipulation not up-to-date because 7 source files are not up-to-date (C:\jenkins\workspace\fiji-windows-full\src-plugins\Stack_Manipulation\src\main\java\DeInterleave_.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Stack_Manipulation\src\main\java\Kalman_Filter.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Stack_Manipulation\src\main\java\Slice_Keeper.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Stack_Manipulation\src\main\java\Slice_Remover.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Stack_Manipulation\src\main\java\Stack_Interleaver.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Stack_Manipulation\src\main\java\Stack_Sorter.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Stack_Manipulation\src\main\java\Stack_Splitter.java)
Compiling 7 files in C:\jenkins\workspace\fiji-windows-full\src-plugins\Stack_Manipulation
[-source, 1.5, -target, 1.5, -classpath, C:\jenkins\workspace\fiji-windows-full\src-plugins\Stack_Manipulation\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar,> -d, C:\jenkins\workspace\fiji-windows-full\src-plugins\Stack_Manipulation\target\classes, C:\jenkins\workspace\fiji-windows-full\src-plugins\Stack_Manipulation\src\main\java\DeInterleave_.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Stack_Manipulation\src\main\java\Kalman_Filter.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Stack_Manipulation\src\main\java\Slice_Keeper.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Stack_Manipulation\src\main\java\Slice_Remover.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Stack_Manipulation\src\main\java\Stack_Interleaver.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Stack_Manipulation\src\main\java\Stack_Sorter.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Stack_Manipulation\src\main\java\Stack_Splitter.java]
using the class path: C:\jenkins\workspace\fiji-windows-full\src-plugins\Stack_Manipulation\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar>
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: C:\jenkins\workspace\fiji-windows-full\src-plugins\Stack_Manipulation\src\main\java\Kalman_Filter.java uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Statistical_Region_Merging not up-to-date because 1 source files are not up-to-date (C:\jenkins\workspace\fiji-windows-full\src-plugins\Statistical_Region_Merging\src\main\java\SRM_.java)
Compiling 1 files in C:\jenkins\workspace\fiji-windows-full\src-plugins\Statistical_Region_Merging
[-source, 1.5, -target, 1.5, -classpath, C:\jenkins\workspace\fiji-windows-full\src-plugins\Statistical_Region_Merging\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar,> -d, C:\jenkins\workspace\fiji-windows-full\src-plugins\Statistical_Region_Merging\target\classes, C:\jenkins\workspace\fiji-windows-full\src-plugins\Statistical_Region_Merging\src\main\java\SRM_.java]
using the class path: C:\jenkins\workspace\fiji-windows-full\src-plugins\Statistical_Region_Merging\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar>
poi-loci not up-to-date because 1 source files are not up-to-date (C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\forks\poi\src\loci\poi\hssf\dev\EFHSSF.java)
bio-formats not up-to-date because of poi-loci
Stitching_ not up-to-date because of bio-formats
Sync_Win not up-to-date because 12 source files are not up-to-date (C:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\DisplayChangeEvent.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\DisplayChangeListener.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\IJEventMulticaster.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\IntField.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\IntSlider.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\OpenImage5DAdapter.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\OpenImage5DWindow.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\OpenStackAdapter.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\OpenStackWindow.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\Sync_Measure_3D.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\Sync_Windows.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\TextFieldFocus.java)
Compiling 12 files in C:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win
[-source, 1.5, -target, 1.5, -classpath, C:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\image5d\target\Image_5D-1.2.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar,> -d, C:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\target\classes, C:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\DisplayChangeEvent.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\DisplayChangeListener.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\IJEventMulticaster.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\IntField.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\IntSlider.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\OpenImage5DAdapter.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\OpenImage5DWindow.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\OpenStackAdapter.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\OpenStackWindow.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\Sync_Measure_3D.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\Sync_Windows.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\TextFieldFocus.java]
using the class path: C:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\image5d\target\Image_5D-1.2.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar>
Note: C:\jenkins\workspace\fiji-windows-full\src-plugins\Sync_Win\src\main\java\Sync_Windows.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Thread_Killer not up-to-date because 1 source files are not up-to-date (C:\jenkins\workspace\fiji-windows-full\src-plugins\Thread_Killer\src\main\java\Thread_Killer.java)
Compiling 1 files in C:\jenkins\workspace\fiji-windows-full\src-plugins\Thread_Killer
[-source, 1.5, -target, 1.5, -classpath, C:\jenkins\workspace\fiji-windows-full\src-plugins\Thread_Killer\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar,> -d, C:\jenkins\workspace\fiji-windows-full\src-plugins\Thread_Killer\target\classes, C:\jenkins\workspace\fiji-windows-full\src-plugins\Thread_Killer\src\main\java\Thread_Killer.java]
using the class path: C:\jenkins\workspace\fiji-windows-full\src-plugins\Thread_Killer\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar>
Note: C:\jenkins\workspace\fiji-windows-full\src-plugins\Thread_Killer\src\main\java\Thread_Killer.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Threshold_Colour not up-to-date because 3 source files are not up-to-date (C:\jenkins\workspace\fiji-windows-full\src-plugins\Threshold_Colour\src\main\java\RGBtoLab_.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Threshold_Colour\src\main\java\RGBtoYUV_.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Threshold_Colour\src\main\java\Threshold_Colour.java)
Compiling 3 files in C:\jenkins\workspace\fiji-windows-full\src-plugins\Threshold_Colour
[-source, 1.5, -target, 1.5, -classpath, C:\jenkins\workspace\fiji-windows-full\src-plugins\Threshold_Colour\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar,> -d, C:\jenkins\workspace\fiji-windows-full\src-plugins\Threshold_Colour\target\classes, C:\jenkins\workspace\fiji-windows-full\src-plugins\Threshold_Colour\src\main\java\RGBtoLab_.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Threshold_Colour\src\main\java\RGBtoYUV_.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Threshold_Colour\src\main\java\Threshold_Colour.java]
using the class path: C:\jenkins\workspace\fiji-windows-full\src-plugins\Threshold_Colour\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar>
Time_Stamper not up-to-date because 1 source files are not up-to-date (C:\jenkins\workspace\fiji-windows-full\src-plugins\Time_Stamper\src\main\java\Time_Stamper.java)
Compiling 1 files in C:\jenkins\workspace\fiji-windows-full\src-plugins\Time_Stamper
[-source, 1.5, -target, 1.5, -classpath, C:\jenkins\workspace\fiji-windows-full\src-plugins\Time_Stamper\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar,> -d, C:\jenkins\workspace\fiji-windows-full\src-plugins\Time_Stamper\target\classes, C:\jenkins\workspace\fiji-windows-full\src-plugins\Time_Stamper\src\main\java\Time_Stamper.java]
using the class path: C:\jenkins\workspace\fiji-windows-full\src-plugins\Time_Stamper\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar>
ToAST_ not up-to-date because 2 source files are not up-to-date (C:\jenkins\workspace\fiji-windows-full\src-plugins\ToAST_\src\main\java\parObject.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\ToAST_\src\main\java\ToAST25_.java)
Compiling 2 files in C:\jenkins\workspace\fiji-windows-full\src-plugins\ToAST_
[-source, 1.5, -target, 1.5, -classpath, C:\jenkins\workspace\fiji-windows-full\src-plugins\ToAST_\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar,> -d, C:\jenkins\workspace\fiji-windows-full\src-plugins\ToAST_\target\classes, C:\jenkins\workspace\fiji-windows-full\src-plugins\ToAST_\src\main\java\parObject.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\ToAST_\src\main\java\ToAST25_.java]
using the class path: C:\jenkins\workspace\fiji-windows-full\src-plugins\ToAST_\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar>
Note: C:\jenkins\workspace\fiji-windows-full\src-plugins\ToAST_\src\main\java\ToAST25_.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: C:\jenkins\workspace\fiji-windows-full\src-plugins\ToAST_\src\main\java\ToAST25_.java uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
TopoJ_ not up-to-date because 2 source files are not up-to-date (C:\jenkins\workspace\fiji-windows-full\src-plugins\TopoJ_\src\main\java\Compute_Topography.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TopoJ_\src\main\java\Remove_Slope.java)
Compiling 2 files in C:\jenkins\workspace\fiji-windows-full\src-plugins\TopoJ_
[-source, 1.5, -target, 1.5, -classpath, C:\jenkins\workspace\fiji-windows-full\src-plugins\TopoJ_\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\Jama\target\Jama-1.0.2.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar,> -d, C:\jenkins\workspace\fiji-windows-full\src-plugins\TopoJ_\target\classes, C:\jenkins\workspace\fiji-windows-full\src-plugins\TopoJ_\src\main\java\Compute_Topography.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TopoJ_\src\main\java\Remove_Slope.java]
using the class path: C:\jenkins\workspace\fiji-windows-full\src-plugins\TopoJ_\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\Jama\target\Jama-1.0.2.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar>
Note: C:\jenkins\workspace\fiji-windows-full\src-plugins\TopoJ_\src\main\java\Remove_Slope.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Parsing C:\Users\jenkins\.m2\repository\org\jdom\jdom-contrib\1.1.3\jdom-contrib-1.1.3.pom
Parsing C:\Users\jenkins\.m2\repository\org\jdom\jdom\1.1.3\jdom-1.1.3.pom
Parsing C:\Users\jenkins\.m2\repository\jgrapht\jgrapht-jdk1.6\0.8.1\jgrapht-jdk1.6-0.8.1.pom
Parsing C:\Users\jenkins\.m2\repository\jgraph\jgraphx\1.10.0.3\jgraphx-1.10.0.3.pom
TrackMate_ not up-to-date because 185 source files are not up-to-date (C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\action\AbstractTMAction.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\action\CaptureOverlayAction.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\action\CopyOverlayAction.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\action\ExportTracksToXML.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\action\ExtractTrackStackAction.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\action\GrabSpotImageAction.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\action\ISBIChallengeExporter.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\action\LinkNew3DViewerAction.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\action\PlotNSpotsVsTimeAction.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\action\RadiusToEstimatedAction.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\action\RecalculateFeatureAction.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\action\ResetRadiusAction.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\action\ResetSpotTimeFeatureAction.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\action\TrackMateAction.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\Dimension.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\FeatureFilter.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\FeatureAnalyzer.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\FeatureModel.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\spot\AbstractSpotFeatureAnalyzer.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\spot\BlobContrast.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\spot\BlobContrastAndSNR.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\spot\BlobDescriptiveStatistics.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\spot\BlobMorphology.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\spot\IndependentSpotFeatureAnalyzer.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\spot\RadiusEstimator.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\spot\SpotFeatureAnalyzer.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\spot\SpotIconGrabber.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\track\TrackBranchingAnalyzer.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\track\TrackDurationAnalyzer.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\track\TrackFeatureAnalyzer.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\track\TrackSpeedStatisticsAnalyzer.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\ActionChooserPanel.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\ActionListenablePanel.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\BasicSegmenterConfigurationPanel.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\DisplayerChoiceDescriptor.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\DisplayerPanel.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\FilterGuiPanel.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\FilterPanel.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\GuiReader.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\GuiSaver.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\ImagePlusChooser.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\InitFilterPanel.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\JNumericTextField.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\JPanelColorByFeatureGUI.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\JPanelFeaturePenalty.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\JPanelFeatureSelectionGui.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\JPanelTrackerSettingsMain.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\LAPTrackerSettingsPanel.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\LaunchDisplayerDescriptor.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\ListChooserPanel.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\LoadDescriptor.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\LogPanel.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\LogSegmenterConfigurationPanel.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\NearestNeighborTrackerSettingsPanel.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\SaveDescriptor.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\SegmentationDescriptor.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\SegmenterChoiceDescriptor.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\SegmenterConfigurationPanel.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\SegmenterConfigurationPanelDescriptor.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\SimpleLAPTrackerSettingsPanel.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\SomeDialogDescriptor.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\SpotFilterDescriptor.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\StartDialogPanel.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\TrackerChoiceDescriptor.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\TrackerConfigurationPanel.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\TrackerConfigurationPanelDescriptor.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\TrackFilterDescriptor.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\TrackingDescriptor.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\TrackMateWizard.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\WizardController.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\WizardPanelDescriptor.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\InfoTextable.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\io\TmXmlKeys.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\io\TmXmlReader.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\io\TmXmlWriter.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\Logger.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\segmentation\AbstractSpotSegmenter.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\tr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mate\tracking\costfunction\MergingCostFunction.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\costfunction\SplittingCostFunction.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\costmatrix\CostMatrixCreator.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\costmatrix\LAPTrackerCostMatrixCreator.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\costmatrix\LinkingCostMatrixCreator.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\costmatrix\TrackSegmentCostMatrixCreator.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\FastLAPTracker.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\hungarian\AssignmentAlgorithm.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\hungarian\AssignmentProblem.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\hungarian\HungarianAlgorithm.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\hungarian\MunkresKuhnAlgorithm.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\kdtree\NearestNeighborTracker.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\kdtree\NearestNeighborTrackerSettings.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\kdtree\SpotNode.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\LAPTracker.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\LAPTrackerSettings.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\LAPUtils.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\SimpleFastLAPTracker.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\SimpleLAPTracker.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\SpotTracker.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\TrackerSettings.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\TrackMateModel.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\TrackMateModelChangeEvent.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\TrackMateModelChangeListener.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\TrackMateSelectionChangeEvent.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\TrackMateSelectionChangeListener.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\TrackMate_.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\util\DefaultFileFilter.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\util\TMUtils.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\util\TrackSplitter.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\AbstractTrackMateModelView.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\hyperstack\HyperStackDisplayer.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\hyperstack\SpotEditTool.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\hyperstack\SpotOverlay.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\hyperstack\TrackOverlay.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\threedviewer\SpotDisplayer3D.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\threedviewer\SpotGroupNode.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\threedviewer\TrackDisplayNode.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\TrackMateModelView.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\TrackMateSelectionView.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\FeaturePlotSelectionPanel.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\InfoPane.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\JGraphXAdapter.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\mxScaledLabelShape.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\mxSideTextShape.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\mxTrackGraphComponent.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\mxTrackGraphLayout.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\mxTrackSchemeSvgCanvas.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\SaveAction.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\SpotFeatureGrapher.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\SpotImageUpdater.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\TrackSchemeFrame.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\TrackSchemePopupMenu.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\TrackSchemeToolbar.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\XYEdgeRenderer.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\XYEdgeSeries.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\XYEdgeSeriesCollection.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\mpicbg\imglib\algorithm\gauss\DifferenceOfGaussianRealNI.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\mpicbg\imglib\algorithm\laplace\LoGKernelFactory.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\mpicbg\imglib\cursor\special\AbstractSpecialCursor.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\mpicbg\imglib\cursor\special\CoordsCursor.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\mpicbg\imglib\cursor\special\DiscCursor.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\mpicbg\imglib\cursor\special\DomainCursor.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\mpicbg\imglib\cursor\special\SphereCursor.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\mpicbg\imglib\cursor\special\Utils.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\org\jfree\chart\annotations\XYTextSimpleAnnotation.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\org\jfree\chart\ExportableChartPanel.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\org\jfree\chart\renderer\InterpolatePaintScale.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\org\jfree\chart\util\ChartExporter.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\org\jfree\data\statistics\LogHistogramDataset.java)
Compiling 185 files in C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_
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C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\spot\BlobDescriptiveStatistics.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\spot\BlobMorphology.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\spot\IndependentSpotFeatureAnalyzer.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\spot\RadiusEstimator.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\spot\SpotFeatureAnalyzer.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\spot\SpotIconGrabber.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\track\TrackBranchingAnalyzer.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\track\TrackDurationAnalyzer.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\track\TrackFeatureAnalyzer.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\features\track\TrackSpeedStatisticsAnalyzer.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\ActionChooserPanel.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\ActionListenablePanel.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\BasicSegmenterConfigurationPanel.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\DisplayerChoiceDescriptor.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\DisplayerPanel.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\FilterGuiPanel.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\FilterPanel.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\GuiReader.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\GuiSaver.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\ImagePlusChooser.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\InitFilterPanel.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\JNumericTextField.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\JPanelColorByFeatureGUI.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\JPanelFeaturePenalty.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\JPanelFeatureSelectionGui.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\JPanelTrackerSettingsMain.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\LAPTrackerSettingsPanel.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\LaunchDisplayerDescriptor.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\ListChooserPanel.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\LoadDescriptor.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\LogPanel.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\LogSegmenterConfigurationPanel.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\NearestNeighborTrackerSettingsPanel.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\SaveDescriptor.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\SegmentationDescriptor.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\SegmenterChoiceDescriptor.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\SegmenterConfigurationPanel.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\SegmenterConfigurationPanelDescriptor.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\SimpleLAPTrackerSettingsPanel.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\SomeDialogDescriptor.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\SpotFilterDescriptor.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\StartDialogPanel.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\TrackerChoiceDescriptor.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\TrackerConfigurationPanel.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\TrackerConfigurationPanelDescriptor.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\TrackFilterDescriptor.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\TrackingDescriptor.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\TrackMateWizard.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\WizardController.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\gui\WizardPanelDescriptor.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\InfoTextable.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\io\TmXmlKeys.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\io\TmXmlReader.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\io\TmXmlWriter.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\Logger.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\segmentation\AbstractSpotSegmenter.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\segmentation\BasicSegmenterSettings.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\segmentation\DogSegmenter.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\segmentation\DownSampleLogSegmenter.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\segmentation\DownSampleLogSegmenterConfigurationPanel.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\segmentation\DownSampleLogSegmenterSettings.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\segmentation\LogSegmenter.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\segmentation\LogSegmenterSettings.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\segmentation\ManualSegmenter.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\segmentation\SegmenterSettings.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\segmentation\SpotSegmenter.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\Settings.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\Spot.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\SpotCollection.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\SpotImp.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tests\ClassNames_TestDrive.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tests\ConcurrentSpotTestDrive.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tests\DogSegmenterTestDrive.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tests\GUIReader_TestDrive.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tests\HangingTracking_TestDrive.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tests\HyperStackDisplayerTestDrive.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tests\JPanelTrackerSettings_Test.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tests\LAPTrackerTestDrive.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tests\LogSegmenterTestDrive.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tests\MultiThread_TestDrive.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tests\NNTrackerTest.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tests\PeakPickerSegmenterTestDrive.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tests\RadiusEstimator_TestDrive.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tests\SingleFrame_TestDrive.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tests\SpotDisplayer3DTestDrive.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tests\SpotFeatureGrapher_TestDrive.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tests\SpotGroupNodeTestDrive.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tests\TmXmlReaderTestDrive.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tests\TrackMateModel_TestDrive.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tests\TrackMate_TestDrive.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tests\TrackVisualizerTestDrive.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\costfunction\CostFunctions.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\costfunction\GapClosingCostFunction.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\costfunction\LinkingCostFunction.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\costfunction\MergingCostFunction.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\costfunction\SplittingCostFunction.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\costmatrix\CostMatrixCreator.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\costmatrix\LAPTrackerCostMatrixCreator.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\costmatrix\LinkingCostMatrixCreator.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\costmatrix\TrackSegmentCostMatrixCreator.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\FastLAPTracker.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\hungarian\AssignmentAlgorithm.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\hungarian\AssignmentProblem.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\hungarian\HungarianAlgorithm.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\hungarian\MunkresKuhnAlgorithm.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\kdtree\NearestNeighborTracker.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\kdtree\NearestNeighborTrackerSettings.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\kdtree\SpotNode.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\LAPTracker.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\LAPTrackerSettings.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\LAPUtils.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\SimpleFastLAPTracker.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\SimpleLAPTracker.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\SpotTracker.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\tracking\TrackerSettings.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\TrackMateModel.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\TrackMateModelChangeEvent.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\TrackMateModelChangeListener.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\TrackMateSelectionChangeEvent.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\TrackMateSelectionChangeListener.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\TrackMate_.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\util\DefaultFileFilter.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\util\TMUtils.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\util\TrackSplitter.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\AbstractTrackMateModelView.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\hyperstack\HyperStackDisplayer.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\hyperstack\SpotEditTool.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\hyperstack\SpotOverlay.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\hyperstack\TrackOverlay.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\threedviewer\SpotDisplayer3D.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\threedviewer\SpotGroupNode.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\threedviewer\TrackDisplayNode.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\TrackMateModelView.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\TrackMateSelectionView.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\FeaturePlotSelectionPanel.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\InfoPane.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\JGraphXAdapter.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\mxScaledLabelShape.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\mxSideTextShape.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\mxTrackGraphComponent.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\mxTrackGraphLayout.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\mxTrackSchemeSvgCanvas.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\SaveAction.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\SpotFeatureGrapher.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\SpotImageUpdater.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\TrackSchemeFrame.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\TrackSchemePopupMenu.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\TrackSchemeToolbar.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\XYEdgeRenderer.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\XYEdgeSeries.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\fiji\plugin\trackmate\visualization\trackscheme\XYEdgeSeriesCollection.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\mpicbg\imglib\algorithm\gauss\DifferenceOfGaussianRealNI.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\mpicbg\imglib\algorithm\laplace\LoGKernelFactory.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\mpicbg\imglib\cursor\special\AbstractSpecialCursor.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\mpicbg\imglib\cursor\special\CoordsCursor.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\mpicbg\imglib\cursor\special\DiscCursor.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\mpicbg\imglib\cursor\special\DomainCursor.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\mpicbg\imglib\cursor\special\SphereCursor.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\mpicbg\imglib\cursor\special\Utils.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\org\jfree\chart\annotations\XYTextSimpleAnnotation.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\org\jfree\chart\ExportableChartPanel.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\org\jfree\chart\renderer\InterpolatePaintScale.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\org\jfree\chart\util\ChartExporter.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\src\main\java\org\jfree\data\statistics\LogHistogramDataset.java]
using the class path: C:\jenkins\workspace\fiji-windows-full\src-plugins\TrackMate_\target\classes;C:\jenkins\workspace\fiji-windows-full\src-plugins\3D_Viewer\target\3D_Viewer-2.0.0-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\Jama\target\Jama-1.0.2.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\VIB-lib\target\VIB-lib-2.0.0-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\batik\batik\1.8\batik-1.8.jar;C:\Users\jenkins\.m2\repository\bouncycastle\bcmail-jdk14\138\bcmail-jdk14-138.jar;C:\Users\jenkins\.m2\repository\bouncycastle\bcprov-jdk14\138\bcprov-jdk14-138.jar;C:\Users\jenkins\.m2\repository\com\sun\clibwrapper_jiio\1.1\clibwrapper_jiio-1.1.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\fiji-lib\target\fiji-lib-2.0.0-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\com\jgoodies\forms\1.2.1\forms-1.2.1.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;C:\jenkins\workspace\fiji-windows-full\modules\imglib\imglib1\core\target\imglib-2.0.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\imglib\imglib1\algorithms\target\imglib-algorithms-2.0.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\imglib\imglib1\ij\target\imglib-ij-2.0.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\imglib\imglib1\io\target\imglib-io-2.0.0-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\com\lowagie\itext\2.1.5\itext-2.1.5.jar;C:\Users\jenkins\.m2\repository\com\itextpdf\itextpdf\5.1.1\itextpdf-5.1.1.jar;C:\Users\jenkins\.m2\repository\java3d\j3d-core\1.5.2\j3d-core-1.5.2.jar;C:\Users\jenkins\.m2\repository\java3d\j3d-core-utils\1.5.2\j3d-core-utils-1.5.2.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\forks\jai\target\jai_imageio-4.4-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\jama\jama\1.0.2\jama-1.0.2.jar;C:\Users\jenkins\.m2\repository\org\jfree\jcommon\1.0.17\jcommon-1.0.17.jar;C:\Users\jenkins\.m2\repository\org\jdom\jdom\1.1.3\jdom-1.1.3.jar;C:\Users\jenkins\.m2\repository\org\jdom\jdom-contrib\1.1.3\jdom-contrib-1.1.3.jar;C:\Users\jenkins\.m2\repository\org\jfree\jfreechart\1.0.14\jfreechart-1.0.14.jar;C:\Users\jenkins\.m2\repository\jgrapht\jgrapht-jdk1.6\0.8.1\jgrapht-jdk1.6-0.8.1.jar;C:\Users\jenkins\.m2\repository\jgraph\jgraphx\1.10.0.3\jgraphx-1.10.0.3.jar;C:\Users\jenkins\.m2\repository\junit\junit\4.8.1\junit-4.8.1.jar;C:\Users\jenkins\.m2\repository\com\jcraft\jzlib\1.0.7\jzlib-1.0.7.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\common\target\loci-common-4.4-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\stubs\lwf-stubs\target\lwf-stubs-4.4-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\edu\mines\mines-jtk\20100113\mines-jtk-20100113.jar;C:\Users\jenkins\.m2\repository\mpicbg\mpicbg\20111128\mpicbg-20111128.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\ome-xml\target\ome-xml-4.4-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\pal-optimization\target\pal-optimization-2.0.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\scifio\target\scifio-4.4-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\javax\servlet\servlet-api\2.5\servlet-api-2.5.jar;C:\Users\jenkins\.m2\repository\org\slf4j\slf4j-api\1.5.10\slf4j-api-1.5.10.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar;C>:\Users\jenkins\.m2\repository\java3d\vecmath\1.5.2\vecmath-1.5.2.jar;C:\Users\jenkins\.m2\repository\xml-apis\xml-apis\1.3.04\xml-apis-1.3.04.jar
poi-loci not up-to-date because 1 source files are not up-to-date (C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\forks\poi\src\loci\poi\hssf\dev\EFHSSF.java)
bio-formats not up-to-date because of poi-loci
Stitching_ not up-to-date because of bio-formats
Trainable_Segmentation not up-to-date because of Stitching_
poi-loci not up-to-date because 1 source files are not up-to-date (C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\forks\poi\src\loci\poi\hssf\dev\EFHSSF.java)
bio-formats not up-to-date because of poi-loci
Stitching_ not up-to-date because of bio-formats
poi-loci not up-to-date because 1 source files are not up-to-date (C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\forks\poi\src\loci\poi\hssf\dev\EFHSSF.java)
bio-formats not up-to-date because of poi-loci
poi-loci not up-to-date because 1 source files are not up-to-date (C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\forks\poi\src\loci\poi\hssf\dev\EFHSSF.java)
bio-formats not up-to-date because of poi-loci
loci_plugins not up-to-date because of bio-formats
poi-loci not up-to-date because 1 source files are not up-to-date (C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\forks\poi\src\loci\poi\hssf\dev\EFHSSF.java)
Compiling 37 files in C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation
[-source, 1.5, -target, 1.5, -classpath, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\target\classes;C:\jenkins\workspace\fiji-windows-full\src-plugins\Anisotropic_Diffusion_2D\target\Anisotropic_Diffusion_2D-2.0.0-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\Fiji_Plugins\target\Fiji_Plugins-2.0.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\image5d\target\Image_5D-1.2.5.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\Jama\target\Jama-1.0.2.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\Stitching_\target\Stitching_-2.0.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\VIB-lib\target\VIB-lib-2.0.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\bio-formats\target\bio-formats-4.4-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\com\sun\clibwrapper_jiio\1.1\clibwrapper_jiio-1.1.jar;C:\Users\jenkins\.m2\repository\commons-logging\commons-logging\1.1.1\commons-logging-1.1.1.jar;C:\jenkins\workspace\fiji-windows-full\modules\commons-math\target\commons-math-3.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\fiji-lib\target\fiji-lib-2.0.0-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\com\jgoodies\forms\1.2.1\forms-1.2.1.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\imagescience\target\imagescience-2.4.1.jar;C:\jenkins\workspace\fiji-windows-full\modules\imglib\imglib1\core\target\imglib-2.0.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\imglib\imglib1\algorithms\target\imglib-algorithms-2.0.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\imglib\imglib1\ij\target\imglib-ij-2.0.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\imglib\imglib2\core\target\imglib2-2.0.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\imglib\imglib2\algorithms\core\target\imglib2-algorithms-2.0.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\imglib\imglib2\ij\target\imglib2-ij-2.0.0-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\java3d\j3d-core\1.5.2\j3d-core-1.5.2.jar;C:\Users\jenkins\.m2\repository\java3d\j3d-core-utils\1.5.2\j3d-core-utils-1.5.2.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\forks\jai\target\jai_imageio-4.4-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\jama\jama\1.0.2\jama-1.0.2.jar;C:\Users\jenkins\.m2\repository\net\sf\squirrel-sql\thirdparty-non-maven\java-cup\0.11a\java-cup-0.11a.jar;C:\Users\jenkins\.m2\repository\com\jcraft\jsch\0.1.42\jsch-0.1.42.jar;C:\Users\jenkins\.m2\repository\junit\junit\4.8.1\junit-4.8.1.jar;C:\Users\jenkins\.m2\repository\com\jcraft\jzlib\1.0.7\jzlib-1.0.7.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\common\target\loci-common-4.4-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\loci-plugins\target\loci_plugins-4.4-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\log4j\log4j\1.2.14\log4j-1.2.14.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\stubs\lwf-stubs\target\lwf-stubs-4.4-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\forks\mdbtools\target\mdbtools-java-4.4-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\metakit\target\metakit-4.4-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\edu\mines\mines-jtk\20100113\mines-jtk-20100113.jar;C:\Users\jenkins\.m2\repository\mpicbg\mpicbg\20111128\mpicbg-20111128.jar;C:\Users\jenkins\.m2\repository\mpicbg\mpicbg\20120621\mpicbg-20120621.jar;C:\Users\jenkins\.m2\repository\essi-unidata\netcdf-java\4.0.41\netcdf-java-4.0.41.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\ome-xml\target\ome-xml-4.4-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\pal-optimization\target\pal-optimization-2.0.0-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\org\pentaho\pentaho-commons\pentaho-package-manager\1.0.0\pentaho-package-manager-1.0.0.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\forks\poi\target\poi-loci-4.4-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\scifio\target\scifio-4.4-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\org\slf4j\slf4j-api\1.5.10\slf4j-api-1.5.10.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar;C>:\Users\jenkins\.m2\repository\java3d\vecmath\1.5.2\vecmath-1.5.2.jar;C:\Users\jenkins\.m2\repository\nz\ac\waikato\cms\weka\weka-dev\3.7.6\weka-dev-3.7.6.jar, -d, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\target\classes, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\ai\AttributeClassPair.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\ai\BalancedRandomForest.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\ai\BalancedRandomTree.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\ai\GiniFunction.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\ai\InformationGainFunction.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\ai\SplitFunction.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\ai\Splitter.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\ai\VotesCollector.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\hr\irb\fastRandomForest\Benchmark.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\hr\irb\fastRandomForest\DataCache.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\hr\irb\fastRandomForest\FastRandomForest.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\hr\irb\fastRandomForest\FastRandomTree.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\hr\irb\fastRandomForest\FastRfBagging.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\hr\irb\fastRandomForest\FastRfUtils.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\hr\irb\fastRandomForest\SplitCriteria.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\hr\irb\fastRandomForest\VotesCollector.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\trainableSegmentation\FeatureStack.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\trainableSegmentation\FeatureStack3D.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\trainableSegmentation\FeatureStackArray.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\trainableSegmentation\filters\Entropy_Filter.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\trainableSegmentation\filters\Kuwahara.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\trainableSegmentation\filters\Lipschitz_.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\trainableSegmentation\ImageOverlay.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\trainableSegmentation\metrics\AdjustedRandError.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\trainableSegmentation\metrics\ClassificationStatistics.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\trainableSegmentation\metrics\ClusteredWarpingMismatches.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\trainableSegmentation\metrics\Metrics.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\trainableSegmentation\metrics\PixelError.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\trainableSegmentation\metrics\RandError.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\trainableSegmentation\metrics\WarpingError.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\trainableSegmentation\metrics\WarpingResults.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\trainableSegmentation\RoiListOverlay.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\trainableSegmentation\Trainable_Segmentation.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\trainableSegmentation\utils\PrincipalComponentAnalysis.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\trainableSegmentation\utils\Utils.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\trainableSegmentation\WekaSegmentation.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\src\main\java\trainableSegmentation\Weka_Segmentation.java]
using the class path: C:\jenkins\workspace\fiji-windows-full\src-plugins\Trainable_Segmentation\target\classes;C:\jenkins\workspace\fiji-windows-full\src-plugins\Anisotropic_Diffusion_2D\target\Anisotropic_Diffusion_2D-2.0.0-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\Fiji_Plugins\target\Fiji_Plugins-2.0.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\image5d\target\Image_5D-1.2.5.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\Jama\target\Jama-1.0.2.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\Stitching_\target\Stitching_-2.0.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\VIB-lib\target\VIB-lib-2.0.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\bio-formats\target\bio-formats-4.4-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\com\sun\clibwrapper_jiio\1.1\clibwrapper_jiio-1.1.jar;C:\Users\jenkins\.m2\repository\commons-logging\commons-logging\1.1.1\commons-logging-1.1.1.jar;C:\jenkins\workspace\fiji-windows-full\modules\commons-math\target\commons-math-3.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\fiji-lib\target\fiji-lib-2.0.0-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\com\jgoodies\forms\1.2.1\forms-1.2.1.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\imagescience\target\imagescience-2.4.1.jar;C:\jenkins\workspace\fiji-windows-full\modules\imglib\imglib1\core\target\imglib-2.0.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\imglib\imglib1\algorithms\target\imglib-algorithms-2.0.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\imglib\imglib1\ij\target\imglib-ij-2.0.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\imglib\imglib2\core\target\imglib2-2.0.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\imglib\imglib2\algorithms\core\target\imglib2-algorithms-2.0.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\imglib\imglib2\ij\target\imglib2-ij-2.0.0-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\java3d\j3d-core\1.5.2\j3d-core-1.5.2.jar;C:\Users\jenkins\.m2\repository\java3d\j3d-core-utils\1.5.2\j3d-core-utils-1.5.2.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\forks\jai\target\jai_imageio-4.4-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\jama\jama\1.0.2\jama-1.0.2.jar;C:\Users\jenkins\.m2\repository\net\sf\squirrel-sql\thirdparty-non-maven\java-cup\0.11a\java-cup-0.11a.jar;C:\Users\jenkins\.m2\repository\com\jcraft\jsch\0.1.42\jsch-0.1.42.jar;C:\Users\jenkins\.m2\repository\junit\junit\4.8.1\junit-4.8.1.jar;C:\Users\jenkins\.m2\repository\com\jcraft\jzlib\1.0.7\jzlib-1.0.7.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\common\target\loci-common-4.4-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\loci-plugins\target\loci_plugins-4.4-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\log4j\log4j\1.2.14\log4j-1.2.14.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\stubs\lwf-stubs\target\lwf-stubs-4.4-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\forks\mdbtools\target\mdbtools-java-4.4-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\metakit\target\metakit-4.4-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\edu\mines\mines-jtk\20100113\mines-jtk-20100113.jar;C:\Users\jenkins\.m2\repository\mpicbg\mpicbg\20111128\mpicbg-20111128.jar;C:\Users\jenkins\.m2\repository\mpicbg\mpicbg\20120621\mpicbg-20120621.jar;C:\Users\jenkins\.m2\repository\essi-unidata\netcdf-java\4.0.41\netcdf-java-4.0.41.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\ome-xml\target\ome-xml-4.4-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\pal-optimization\target\pal-optimization-2.0.0-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\org\pentaho\pentaho-commons\pentaho-package-manager\1.0.0\pentaho-package-manager-1.0.0.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\forks\poi\target\poi-loci-4.4-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\bio-formats\components\scifio\target\scifio-4.4-SNAPSHOT.jar;C:\Users\jenkins\.m2\repository\org\slf4j\slf4j-api\1.5.10\slf4j-api-1.5.10.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar;C>:\Users\jenkins\.m2\repository\java3d\vecmath\1.5.2\vecmath-1.5.2.jar;C:\Users\jenkins\.m2\repository\nz\ac\waikato\cms\weka\weka-dev\3.7.6\weka-dev-3.7.6.jar
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
TransformJ_ not up-to-date because 14 source files are not up-to-date (C:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_About.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Affine.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Crop.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Embed.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Matrix.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Mirror.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Options.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Panel.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Rotate.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Scale.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Translate.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Turn.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Website.java)
Compiling 14 files in C:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_
[-source, 1.5, -target, 1.5, -classpath, C:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\image5d\target\Image_5D-1.2.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\imagescience\target\imagescience-2.4.1.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar,> -d, C:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\target\classes, C:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_About.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Affine.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Crop.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Embed.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Matrix.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Mirror.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Options.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Panel.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Rotate.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Scale.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Translate.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Turn.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Website.java]
using the class path: C:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\image5d\target\Image_5D-1.2.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\imagescience\target\imagescience-2.4.1.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar>
Note: C:\jenkins\workspace\fiji-windows-full\src-plugins\TransformJ_\src\main\java\TJ_Matrix.java uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
TurboReg_ not up-to-date because 1 source files are not up-to-date (C:\jenkins\workspace\fiji-windows-full\src-plugins\TurboReg_\src\main\java\TurboReg_.java)
Compiling 1 files in C:\jenkins\workspace\fiji-windows-full\src-plugins\TurboReg_
[-source, 1.5, -target, 1.5, -classpath, C:\jenkins\workspace\fiji-windows-full\src-plugins\TurboReg_\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar,> -d, C:\jenkins\workspace\fiji-windows-full\src-plugins\TurboReg_\target\classes, C:\jenkins\workspace\fiji-windows-full\src-plugins\TurboReg_\src\main\java\TurboReg_.java]
using the class path: C:\jenkins\workspace\fiji-windows-full\src-plugins\TurboReg_\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar>
Note: C:\jenkins\workspace\fiji-windows-full\src-plugins\TurboReg_\src\main\java\TurboReg_.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
UnwarpJ_ not up-to-date because 1 source files are not up-to-date (C:\jenkins\workspace\fiji-windows-full\src-plugins\UnwarpJ_\src\main\java\UnwarpJ_.java)
Compiling 1 files in C:\jenkins\workspace\fiji-windows-full\src-plugins\UnwarpJ_
[-source, 1.5, -target, 1.5, -classpath, C:\jenkins\workspace\fiji-windows-full\src-plugins\UnwarpJ_\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar,> -d, C:\jenkins\workspace\fiji-windows-full\src-plugins\UnwarpJ_\target\classes, C:\jenkins\workspace\fiji-windows-full\src-plugins\UnwarpJ_\src\main\java\UnwarpJ_.java]
using the class path: C:\jenkins\workspace\fiji-windows-full\src-plugins\UnwarpJ_\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar>
Note: C:\jenkins\workspace\fiji-windows-full\src-plugins\UnwarpJ_\src\main\java\UnwarpJ_.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: C:\jenkins\workspace\fiji-windows-full\src-plugins\UnwarpJ_\src\main\java\UnwarpJ_.java uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Updater_Fix not up-to-date because 2 source files are not up-to-date (C:\jenkins\workspace\fiji-windows-full\src-plugins\Updater_Fix\src\main\java\fiji\updater\BinaryPList.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Updater_Fix\src\main\java\fiji\updater\Fix.java)
Compiling 2 files in C:\jenkins\workspace\fiji-windows-full\src-plugins\Updater_Fix
[-source, 1.5, -target, 1.5, -classpath, C:\jenkins\workspace\fiji-windows-full\src-plugins\Updater_Fix\target\classes, -d, C:\jenkins\workspace\fiji-windows-full\src-plugins\Updater_Fix\target\classes, C:\jenkins\workspace\fiji-windows-full\src-plugins\Updater_Fix\src\main\java\fiji\updater\BinaryPList.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Updater_Fix\src\main\java\fiji\updater\Fix.java]
using the class path: C:\jenkins\workspace\fiji-windows-full\src-plugins\Updater_Fix\target\classes
Note: C:\jenkins\workspace\fiji-windows-full\src-plugins\Updater_Fix\src\main\java\fiji\updater\BinaryPList.java uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Vaa3d_Reader not up-to-date because 6 source files are not up-to-date (C:\jenkins\workspace\fiji-windows-full\src-plugins\Vaa3d_Reader\src\main\java\org\janelia\vaa3d\reader\Pbd16InputStream.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Vaa3d_Reader\src\main\java\org\janelia\vaa3d\reader\Pbd8InputStream.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Vaa3d_Reader\src\main\java\org\janelia\vaa3d\reader\PbdInputStream.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Vaa3d_Reader\src\main\java\org\janelia\vaa3d\reader\TestReader.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Vaa3d_Reader\src\main\java\org\janelia\vaa3d\reader\V3dRawImageStream.javaC:\jenkins\workspace\fiji-windows-full\src-plugins\Vaa3d_Reader\src\main\java\org\janelia\vaa3d\reader\Vaa3d_Reader.java)
Compiling 6 files in C:\jenkins\workspace\fiji-windows-full\src-plugins\Vaa3d_Reader
[-source, 1.5, -target, 1.5, -classpath, C:\jenkins\workspace\fiji-windows-full\src-plugins\Vaa3d_Reader\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\fiji-lib\target\fiji-lib-2.0.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar,> -d, C:\jenkins\workspace\fiji-windows-full\src-plugins\Vaa3d_Reader\target\classes, C:\jenkins\workspace\fiji-windows-full\src-plugins\Vaa3d_Reader\src\main\java\org\janelia\vaa3d\reader\Pbd16InputStream.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Vaa3d_Reader\src\main\java\org\janelia\vaa3d\reader\Pbd8InputStream.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Vaa3d_Reader\src\main\java\org\janelia\vaa3d\reader\PbdInputStream.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Vaa3d_Reader\src\main\java\org\janelia\vaa3d\reader\TestReader.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Vaa3d_Reader\src\main\java\org\janelia\vaa3d\reader\V3dRawImageStream.java, C:\jenkins\workspace\fiji-windows-full\src-plugins\Vaa3d_Reader\src\main\java\org\janelia\vaa3d\reader\Vaa3d_Reader.java]
using the class path: C:\jenkins\workspace\fiji-windows-full\src-plugins\Vaa3d_Reader\target\classes;C:\Users\jenkins\.m2\repository\com\apple\AppleJavaExtensions\1.5\AppleJavaExtensions-1.5.jar;C:\jenkins\workspace\fiji-windows-full\src-plugins\fiji-lib\target\fiji-lib-2.0.0-SNAPSHOT.jar;C:\jenkins\workspace\fiji-windows-full\modules\ImageJA\target\ij-1.47a.jar;<https://qa.nest-initiative.org/job/fiji-windows-full/ws/java\win64\jdk1.6.0_24\jre\..\lib\tools.jar>
C:\jenkins\workspace\fiji-windows-full\src-plugins\Vaa3d_Reader\src\main\java\org\janelia\vaa3d\reader\Vaa3d_Reader.java:107: cannot find symbol
symbol : method createHyperStack(java.lang.String,int,int,int,int,int,int)
location: class ij.IJ
ImagePlus hyperStack = IJ.createHyperStack(
^
1 error
fiji.build.minimaven.JavaCompiler$CompileError: Compile error: 1
at fiji.build.minimaven.JavaCompiler.call(JavaCompiler.java:37)
at fiji.build.minimaven.POM.build(POM.java:253)
at fiji.build.minimaven.POM.buildJar(POM.java:194)
at fiji.build.SubFake.buildPOM(SubFake.java:270)
at fiji.build.SubFake.buildPOM(SubFake.java:255)
at fiji.build.SubFake.action(SubFake.java:223)
at fiji.build.Rule.make(Rule.java:195)
at fiji.build.Rule.make(Rule.java:175)
at fiji.build.Rule.makePrerequisites(Rule.java:333)
at fiji.build.Rule.make(Rule.java:189)
at fiji.build.Rule.make(Rule.java:175)
at fiji.build.Fake.make(Fake.java:245)
at fiji.build.Fake.main(Fake.java:60)
Compile error: 1
in rule (fiji.build.SubFake) pom-fiji-plugins <- src-plugins/
in rule (fiji.build.All) all <- ImageJ fiji pom-fiji-plugins
Build step 'Execute shell' marked build as failure
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