[ImageJ-bugs] [Bug 1239] New: Java 3D not working properly
bugzilla at fiji.sc
bugzilla at fiji.sc
Mon Mar 7 11:16:40 CST 2016
http://fiji.sc/bugzilla/show_bug.cgi?id=1239
Bug ID: 1239
Summary: Java 3D not working properly
Product: Fiji
Version: unspecified
Hardware: PC
OS: Windows
Status: NEW
Severity: normal
Priority: P4
Component: Plugins
Assignee: imagej-bugs at imagej.net
Reporter: a.ostrowski at dundee.ac.uk
CC: a.ostrowski at dundee.ac.uk
I'm experiencing significant JAVA version incompatibility issues. Starting from
the fact, that one of the most important PlugIns I use, OMERO connect plugin
requires Java 1.7 or higher. The version supplied with Fiji is 1.6, so I
disabled it forcing the programme to use the system version. This allows some
plugins to run, but the ones requiring Java 3D will not function. I had the IT
department install the new Java 3D, but the problem persists. the exact error
report is as follows:
version = 1.5
Exception occurred in RenderingErrorListener:
java.lang.RuntimeException
at ij3d.ImageWindow3D$ErrorListener.errorOccurred(ImageWindow3D.java:330)
at
javax.media.j3d.VirtualUniverse.notifyRenderingErrorListeners(VirtualUniverse.java:1329)
at
javax.media.j3d.NotificationThread.processNotifications(NotificationThread.java:90)
at javax.media.j3d.NotificationThread.run(NotificationThread.java:107)
nFrames = 1
Please provide an up to date and functional java version or a solution to these
problems.
Thanks!
Information about your version of Java:
os.arch => amd64
os.name => Windows 7
os.version => 6.1
java.version => 1.7.0_60
java.vendor => Oracle Corporation
java.runtime.name => Java(TM) SE Runtime Environment
java.runtime.version => 1.7.0_60-b19
java.vm.name => Java HotSpot(TM) 64-Bit Server VM
java.vm.version => 24.60-b09
java.vm.vendor => Oracle Corporation
java.vm.info => mixed mode
java.awt.graphicsenv => sun.awt.Win32GraphicsEnvironment
java.specification.name => Java Platform API Specification
java.specification.version => 1.7
sun.cpu.endian => little
sun.desktop => windows
file.separator => \
The up-to-date check says: UP_TO_DATE
Information relevant to JAVA_HOME related problems:
JAVA_HOME is set to: C:\Program Files\Java\jdk1.7.0_60/jre
imagej.dir => D:\Fiji.app
Information about the version of each plugin:
Activated update sites:
ImageJ: http://update.imagej.net/ (last check:20160217150804)
Fiji: http://update.fiji.sc/ (last check:20160218135537)
Bio-Formats: http://sites.imagej.net/Bio-Formats/ (last check:20160216022645)
Files not up-to-date:
6a7750c0 (OBSOLETE_UNINSTALLED) 20150814165554
jars/ffmpeg-2.6.1-0.11-android-arm.jar
fd2b5490 (OBSOLETE_UNINSTALLED) 20150814165554
jars/ffmpeg-2.6.1-0.11-android-x86.jar
4653bdb4 (OBSOLETE_UNINSTALLED) 20150814165554
jars/ffmpeg-2.6.1-0.11-linux-x86.jar
977eac28 (OBSOLETE_UNINSTALLED) 20150814165554
jars/ffmpeg-2.6.1-0.11-linux-x86_64.jar
8e223ac3 (OBSOLETE_UNINSTALLED) 20150814165556
jars/ffmpeg-2.6.1-0.11-macosx-x86_64.jar
ccd3679d (OBSOLETE_UNINSTALLED) 20150814165556
jars/ffmpeg-2.6.1-0.11-windows-x86.jar
a314dfd6 (OBSOLETE_UNINSTALLED) 20150814165556
jars/ffmpeg-2.6.1-0.11-windows-x86_64.jar
c295a4c5 (OBSOLETE_UNINSTALLED) 20150814165558 jars/jdom-2.0.2.jar
64241209 (OBSOLETE_UNINSTALLED) 20150814165558 jars/jdom-contrib.jar
ec17890b (LOCAL_ONLY) 20150731184018
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/JHotDraw.jar
91ece67d (LOCAL_ONLY) 20131203192004
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/JWlz.jar
36cb5c0a (LOCAL_ONLY) 20150731184018
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/TableLayout.jar
7c4005e7 (LOCAL_ONLY) 20050801112630
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/axis-wsdl4j.jar
364315a9 (LOCAL_ONLY) 20060423071656
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/axis.jar
3370a633 (LOCAL_ONLY) 20070427153948
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/axis2-saaj.jar
34b7341d (LOCAL_ONLY) 20071111222848
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/backport-util-concurrent.jar
85606650 (LOCAL_ONLY) 20160228171404
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/blitz-javadoc.jar
fdca3ab2 (LOCAL_ONLY) 20160228171326
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/blitz-sources.jar
a97a8e83 (LOCAL_ONLY) 20160228171410
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/blitz.jar
189f61fa (LOCAL_ONLY) 20150805084902
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/bufr.jar
6b2c6ea5 (LOCAL_ONLY) 20160228171140
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/common-javadoc.jar
0d0bc024 (LOCAL_ONLY) 20160228171138
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/common-sources.jar
d838ddf7 (LOCAL_ONLY) 20160228171140
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/common.jar
66c7ae94 (LOCAL_ONLY) 20051122180848
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/commons-beanutils.jar
940245e0 (LOCAL_ONLY) 20111203023826
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/commons-codec.jar
64d8a654 (LOCAL_ONLY) 20060622224518
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/commons-collections.jar
86ab9004 (LOCAL_ONLY) 20061203183312
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/commons-digester.jar
9e9eb622 (LOCAL_ONLY) 20051122180920
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/commons-discovery.jar
d59d3e4c (LOCAL_ONLY) 20080120204418
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/commons-io.jar
f6139801 (LOCAL_ONLY) 20100225012342
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/commons-lang.jar
fa9b8239 (LOCAL_ONLY) 20130516220522
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/commons-logging.jar
60a83b54 (LOCAL_ONLY) 20150731184018
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/commons-validator.jar
15958f82 (LOCAL_ONLY) 20100519160622
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/ehcache-core.jar
27410488 (LOCAL_ONLY) 20061120225932
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/filters.jar
e33cecc2 (LOCAL_ONLY) 20150805084958
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/grib.jar
2cd0d04c (LOCAL_ONLY) 20140422224746
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/guava.jar
85c28658 (LOCAL_ONLY) 20150731184018
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/hibernate-jpa-2.0-api.jar
0c6e277e (LOCAL_ONLY) 20131003214258
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/httpclient.jar
9f61e37d (LOCAL_ONLY) 20130729170622
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/httpcore.jar
d216e98a (LOCAL_ONLY) 20131003214348
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/httpmime.jar
1911c9e1 (LOCAL_ONLY) 20140427224424
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/ice-glacier2.jar
b1d709fb (LOCAL_ONLY) 20140427224658
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/ice-grid.jar
c49b8fa2 (LOCAL_ONLY) 20140427230042
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/ice-storm.jar
53aa5393 (LOCAL_ONLY) 20140427224510
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/ice.jar
ad406214 (LOCAL_ONLY) 20140308072144
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/ij.jar
4679e275 (LOCAL_ONLY) 20080217174132
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/ini4j.jar
62d77e4e (LOCAL_ONLY) 20100520024410
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/java-getopt.jar
c827227f (LOCAL_ONLY) 20100821185944
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/java-image-scaling.jar
86d3432e (LOCAL_ONLY) 20060717130958
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/jaxrpc-api.jar
07f15e96 (LOCAL_ONLY) 20140724173642
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/jcommon.jar
c4eeeb8f (LOCAL_ONLY) 20140731143446
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/jfreechart.jar
d5e85b0e (LOCAL_ONLY) 20150702170156
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/jhdf5.jar
34d3c097 (LOCAL_ONLY) 20111221222152
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/jna.jar
4c09d41c (LOCAL_ONLY) 20130308142342
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/joda-time.jar
4a754817 (LOCAL_ONLY) 20140504150434
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/kryo.jar
10d5cf34 (LOCAL_ONLY) 20060103173402
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/log4j.jar
94e94459 (LOCAL_ONLY) 20160212105654
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/lwf-stubs.jar
ab8ff4ee (LOCAL_ONLY) 20120719222102
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/metadata-extractor.jar
16b765c2 (LOCAL_ONLY) 20120531142650
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/minlog.jar
ac2a30fb (LOCAL_ONLY) 20160228171134
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/model-psql-javadoc.jar
a3b473a5 (LOCAL_ONLY) 20160228171126
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/model-psql-sources.jar
decae9ed (LOCAL_ONLY) 20160228171134
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/model-psql.jar
66de339f (LOCAL_ONLY) 20140821163824
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/native-lib-loader.jar
a51a31db (LOCAL_ONLY) 20131008220038
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/netcdf.jar
aff28c0e (LOCAL_ONLY) 20131010232536
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/objenesis.jar
18382f06 (LOCAL_ONLY) 20140427165354
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/ome-java.jar
7af6ddeb (LOCAL_ONLY) 20100312205702
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/perf4j.jar
81555875 (LOCAL_ONLY) 20111221222232
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/platform.jar
4ef2cfd3 (LOCAL_ONLY) 20091215081538
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/poi.jar
eedc0cd9 (LOCAL_ONLY) 20080930100254
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/serializer.jar
5085d943 (LOCAL_ONLY) 20140205223714
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/slf4j-api.jar
083137a4 (LOCAL_ONLY) 20160212105624
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/specification.jar
ba32bfdf (LOCAL_ONLY) 20100520023746
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/swingx.jar
36cdef55 (LOCAL_ONLY) 20080930100254
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/xalan.jar
93f166fd (LOCAL_ONLY) 20061007140232
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/xercesImpl.jar
a5c15945 (LOCAL_ONLY) 20120703121340
plugins/OMERO.insight-ij-5.2.2-ice35-b17/libs/xmpcore.jar
a00ae789 (LOCAL_ONLY) 20160228171826
plugins/OMERO.insight-ij-5.2.2-ice35-b17/omero_ij.jar
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