[ImageJ-bugs] [Bug 1236] New: Unable to display big images (~10 GB)

bugzilla at fiji.sc bugzilla at fiji.sc
Wed Mar 2 09:04:57 CST 2016


http://fiji.sc/bugzilla/show_bug.cgi?id=1236

            Bug ID: 1236
           Summary: Unable to display big images (~10 GB)
           Product: Fiji
           Version: unspecified
          Hardware: PC
                OS: Linux
            Status: NEW
          Severity: normal
          Priority: P4
         Component: Plugins
          Assignee: imagej-bugs at imagej.net
          Reporter: gherardo.varando at gmail.com
                CC: gherardo.varando at gmail.com

I am using the new version of FIJI with JAVA 8 on Ubuntu 14.04 
When I open a big image (like 4GB, 10 GB) the window that opens appear gray,
like with no image rendered over. The image is actually loaded but I am unable
to see it, if i place the cursor over the image it shows the pixel value in the
fiji bar and all the plugin that acess image pixels work normally.

Information about your version of Java:

  os.arch => amd64
  os.name => Linux
  os.version => 3.16.0-60-generic
  java.version => 1.8.0_66
  java.vendor => Oracle Corporation
  java.runtime.name => Java(TM) SE Runtime Environment
  java.runtime.version => 1.8.0_66-b17
  java.vm.name => Java HotSpot(TM) 64-Bit Server VM
  java.vm.version => 25.66-b17
  java.vm.vendor => Oracle Corporation
  java.vm.info => mixed mode
  java.awt.graphicsenv => sun.awt.X11GraphicsEnvironment
  java.specification.name => Java Platform API Specification
  java.specification.version => 1.8
  sun.cpu.endian => little
  sun.desktop => gnome
  file.separator => /

The up-to-date check says: UP_TO_DATE

Information relevant to JAVA_HOME related problems:

  JAVA_HOME is set to:
/home/cig-gherardo/ownCloud/Segmentation/Fiji.app/java/linux-amd64/jdk1.8.0_66//jre
  imagej.dir => /home/cig-gherardo/ownCloud/Segmentation/Fiji.app

Information about the version of each plugin:

Activated update sites:
ImageJ: http://update.imagej.net/ (last check:20160217160804)
Fiji: http://update.fiji.sc/ (last check:20160218145537)
Java-8: http://sites.imagej.net/Java-8/ (last check:20160226213340)

Files not up-to-date:
  a3c533dc (LOCAL_ONLY) 20160229151649 macros/toolsets/PSDtoolset.ijm
  74fcdc3a (LOCAL_ONLY) 20160222160632 plugins/Map_tool-0.0.1-SNAPSHOT.jar
  673adfd6 (LOCAL_ONLY) 20160219154426
plugins/Multiscale_Mexican_Hat-0.0.1-SNAPSHOT.jar
  318dae2a (LOCAL_ONLY) 20160222102936 plugins/StackJoin_-0.0.1-SNAPSHOT.jar
  16dfb333 (LOCAL_ONLY) 20160229130618 plugins/_ObjCounter-0.0.1-SNAPSHOT.jar

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