[ImageJ-bugs] [Bug 1080] New: after updating, fiji stops working.
bugzilla at fiji.sc
bugzilla at fiji.sc
Fri May 29 11:56:55 CDT 2015
http://fiji.sc/bugzilla/show_bug.cgi?id=1080
Bug ID: 1080
Summary: after updating, fiji stops working.
Product: Fiji
Version: unspecified
Hardware: PC
OS: Linux
Status: NEW
Severity: normal
Priority: P4
Component: Plugins
Assignee: imagej-bugs at imagej.net
Reporter: robert.atwood at diamond.ac.uk
CC: robert.atwood at diamond.ac.uk
Fiji was working, then I updated it, now it is not working.
I reinstalled from the original downloaded package, and it was working, then I
updated that re-installation, and it stopped working too.
If I use an alternate JAVA_HOME then it does work.
This bug report is submitted using the alternate JAVA_HOME because I cannot
launch Fiji with the bundled Java. So, I cannot get to the bug report option!
This is the error message I get:
/dls_sw/apps/ImageJ/x86_64/fiji-20150529/Fiji.app/ImageJ-linux64
Error while executing the main() method of class 'net.imagej.Main':
sun.awt.X11.XException: Cannot write XdndAware property
at
sun.awt.X11.XDnDDropTargetProtocol.registerDropTarget(XDnDDropTargetProtocol.java:79)
at
sun.awt.X11.XDropTargetRegistry.registerDropSite(XDropTargetRegistry.java:554)
at sun.awt.X11.XWindowPeer.addDropTarget(XWindowPeer.java:1633)
at sun.awt.X11.XComponentPeer.addDropTarget(XComponentPeer.java:1509)
at java.awt.dnd.DropTarget.addNotify(DropTarget.java:493)
at java.awt.Component.addNotify(Component.java:6688)
at java.awt.Container.addNotify(Container.java:2567)
at java.awt.Window.addNotify(Window.java:663)
at java.awt.Frame.addNotify(Frame.java:470)
at java.awt.Window.pack(Window.java:704)
at net.imagej.legacy.IJ1Helper.setVisible(IJ1Helper.java:271)
at net.imagej.legacy.ui.LegacyUI.show(LegacyUI.java:132)
at org.scijava.ui.DefaultUIService.showUI(DefaultUIService.java:180)
at org.scijava.ui.DefaultUIService.showUI(DefaultUIService.java:165)
at net.imagej.Main.launch(Main.java:67)
at net.imagej.Main.main(Main.java:73)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at net.imagej.launcher.ClassLauncher.launch(ClassLauncher.java:258)
at net.imagej.launcher.ClassLauncher.run(ClassLauncher.java:184)
at net.imagej.launcher.ClassLauncher.main(ClassLauncher.java:76)
Information about your version of Java:
os.arch => amd64
os.name => Linux
os.version => 2.6.32-504.16.2.el6.x86_64
java.version => 1.8.0_45
java.vendor => Oracle Corporation
java.runtime.name => Java(TM) SE Runtime Environment
java.runtime.version => 1.8.0_45-b14
java.vm.name => Java HotSpot(TM) 64-Bit Server VM
java.vm.version => 25.45-b02
java.vm.vendor => Oracle Corporation
java.vm.info => mixed mode
java.awt.graphicsenv => sun.awt.X11GraphicsEnvironment
java.specification.name => Java Platform API Specification
java.specification.version => 1.8
sun.cpu.endian => little
sun.desktop => null
file.separator => /
The up-to-date check says: UP_TO_DATE
Information relevant to JAVA_HOME related problems:
JAVA_HOME is set to: /dls_sw/apps/java/x64/jdk1.8.0_45/jre
imagej.dir => /dls_sw/apps/ImageJ/x86_64/fiji/Fiji.app
Information about the version of each plugin:
Activated update sites:
ImageJ: http://update.imagej.net/ (last check:20150522112918)
Fiji: http://fiji.sc/update/ (last check:20150528170151)
Bio-Formats: http://sites.imagej.net/Bio-Formats/ (last check:20150528022642)
HDF5: http://sites.imagej.net/Ronneber/ (last check:20150214124119)
Files not up-to-date:
2a3fdedd (MODIFIED) 20150529171934 jars/ij-1.49s.jar
63e90571 (LOCAL_ONLY) 20110303194100 jars/jpedalSTD.jar
28998678 (LOCAL_ONLY) 20120201165122 plugins/Set_TomoROI.py
e63a1c4a (LOCAL_ONLY) 20120306151502 plugins/docentre.py
28135af4 (LOCAL_ONLY) 20130628103559 plugins/sino_centre.py
3359491e (LOCAL_ONLY) 20130208202928 plugins/sino_centre_i12.py
127b1cb1 (LOCAL_ONLY) 20131212191146 plugins/sino_centre_i13.py
d3260180 (LOCAL_ONLY) 20110303194101 scripts/Record_Desktop.py
0ea7f8fc (LOCAL_ONLY) 20110303194101 scripts/Record_Window.py
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