[ImageJ-bugs] [Bug 946] New: can't open .ids file with IFiji/ImageJ2 Bio-formats Importer
bugzilla at fiji.sc
bugzilla at fiji.sc
Thu Oct 16 22:06:14 CDT 2014
http://fiji.sc/bugzilla/show_bug.cgi?id=946
Bug ID: 946
Summary: can't open .ids file with IFiji/ImageJ2 Bio-formats
Importer
Product: Fiji
Version: unspecified
Hardware: Macintosh
OS: Mac OS
Status: NEW
Severity: normal
Priority: P4
Component: Plugins
Assignee: imagej-bugs at imagej.net
Reporter: kinesin2003 at yahoo.com
CC: kinesin2003 at yahoo.com
I had a .ids file here to open, and at first it looks like this is going fine.
But then it says, "Sorry, there was a problem during import" and the text
window (log) that pops up says this:
loci.formats.FormatException: ICS file not found.
at loci.formats.in.ICSReader.initFile(ICSReader.java:775)
at loci.formats.FormatReader.setId(FormatReader.java:1317)
at loci.plugins.in.ImportProcess.initializeFile(ImportProcess.java:494)
at loci.plugins.in.ImportProcess.execute(ImportProcess.java:144)
at loci.plugins.in.Importer.showDialogs(Importer.java:141)
at loci.plugins.in.Importer.run(Importer.java:79)
at loci.plugins.LociImporter.run(LociImporter.java:81)
at ij.IJ.runUserPlugIn(IJ.java:202)
at ij.IJ.runPlugIn(IJ.java:166)
at ij.Executer.runCommand(Executer.java:131)
at ij.Executer.run(Executer.java:64)
at java.lang.Thread.run(Thread.java:695)
Can you help?
I've heard that Image J used to be able to open the .ids type of files, hoping
we can still do that.
best regards,
Laura
Information about your version of Java:
os.arch => x86_64
os.name => Mac OS X
os.version => 10.9.4
java.version => 1.6.0_65
java.vendor => Apple Inc.
java.runtime.name => Java(TM) SE Runtime Environment
java.runtime.version => 1.6.0_65-b14-462-11M4609
java.vm.name => Java HotSpot(TM) 64-Bit Server VM
java.vm.version => 20.65-b04-462
java.vm.vendor => Apple Inc.
java.vm.info => mixed mode
java.awt.graphicsenv => apple.awt.CGraphicsEnvironment
java.specification.name => Java Platform API Specification
java.specification.version => 1.6
sun.cpu.endian => little
sun.desktop => null
file.separator => /
The up-to-date check says: REMIND_LATER
Information relevant to JAVA_HOME related problems:
JAVA_HOME is set to: null
imagej.dir => /Applications/Fiji.app
Information about the version of each plugin:
Activated update sites:
ImageJ: http://update.imagej.net/ (last check:20141015131008)
Fiji: http://fiji.sc/update/ (last check:20141014055500)
Files not up-to-date:
9f4f8151 (OBSOLETE_UNINSTALLED) 20140707074617 jars/jython-2.5.2.jar
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