[ImageJ-bugs] [Bug 916] Tiff fiel not opened/displayed right

bugzilla at fiji.sc bugzilla at fiji.sc
Wed Aug 27 12:42:15 CDT 2014


http://fiji.sc/bugzilla/show_bug.cgi?id=916

Mark Hiner <hinerm at gmail.com> changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
             Status|NEEDSINFO                   |CONFIRMED

--- Comment #5 from Mark Hiner <hinerm at gmail.com> ---
Hi Tom,

 I got the attached image - thank you! I can confirm the image does not open
correctly.

The results I saw were:

* ImageJ 1.x (File > Open): alternating black/white vertical bands
* SCIFIO (File > Import > Image...) and Bio-Formats (File > Import >
Bio-Formats): open as a composite image with an all-255 channel 2

I believe channel 1 is correct for Bio-Formats and SCIFIO. We'll investigate
and figure out why the 2nd channel is being added.. probably related to the
16bit reading you noted in irfanview

Tom - what version of ImageJ were you using that it opened correctly? As of
1.49g I get the alternating vertical bands when opening, as per File > Open in
Fiji.

Thanks again.

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