[ImageJ-bugs] [Bug 741] broken jython after update

bugzilla at fiji.sc bugzilla at fiji.sc
Thu Aug 14 07:57:04 CDT 2014


http://fiji.sc/bugzilla/show_bug.cgi?id=741

John Minter <jrminter at gmail.com> changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
                 CC|                            |jrminter at gmail.com

--- Comment #6 from John Minter <jrminter at gmail.com> ---
I think the problem is more general than this one but thought I should add my
comment here rather than create a new one. I can't import any system modules
from jython scripts. After an umpdate 2014-08-14,

A new python script in the script editor produces

import os

produces 

ImportError: No module named os


import glob

produces
ImportError: No module named glob
at org.python.core.PyException.fillInStackTrace(PyException.java:70)
    at java.lang.Throwable.<init>(Throwable.java:181)
    at java.lang.Exception.<init>(Exception.java:29)
    at java.lang.RuntimeException.<init>(RuntimeException.java:32)
    at org.python.core.PyException.<init>(PyException.java:46)
    at org.python.core.PyException.<init>(PyException.java:43)
    at org.python.core.PyException.<init>(PyException.java:61)
    at org.python.core.Py.ImportError(Py.java:304)
    at org.python.core.imp.import_first(imp.java:755)
    at org.python.core.imp.import_module_level(imp.java:837)
    at org.python.core.imp.importName(imp.java:917)
    at org.python.core.ImportFunction.__call__(__builtin__.java:1220)
    at org.python.core.PyObject.__call__(PyObject.java:357)
    at org.python.core.__builtin__.__import__(__builtin__.java:1173)
    at org.python.core.imp.importOne(imp.java:936)
    at org.python.pycode._pyx2.f$0(New_.py:1)
    at org.python.pycode._pyx2.call_function(New_.py)
    at org.python.core.PyTableCode.call(PyTableCode.java:165)
    at org.python.core.PyCode.call(PyCode.java:18)
    at org.python.core.Py.runCode(Py.java:1275)
    at
org.scijava.plugins.scripting.jython.JythonScriptEngine.eval(JythonScriptEngine.java:76)
    at org.scijava.script.ScriptModule.run(ScriptModule.java:175)
    at org.scijava.module.ModuleRunner.run(ModuleRunner.java:167)
    at org.scijava.module.ModuleRunner.call(ModuleRunner.java:126)
    at org.scijava.module.ModuleRunner.call(ModuleRunner.java:65)
    at
org.scijava.thread.DefaultThreadService$2.call(DefaultThreadService.java:164)
    at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
    at java.util.concurrent.FutureTask.run(FutureTask.java:138)
    at
java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
    at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
    at java.lang.Thread.run(Thread.java:662)

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