[ImageJ-bugs] [Bug 883] New: File->Open mis-reads Gatan DM3 files

[bugzilla at fiji.sc]

http://fiji.sc/bugzilla/show_bug.cgi?id=883

            Bug ID: 883
           Summary: File->Open mis-reads Gatan DM3 files
           Product: Fiji
           Version: unspecified
          Hardware: Macintosh
                OS: Mac OS
            Status: NEW
          Severity: normal
          Priority: P4
         Component: Plugins
          Assignee: imagej-bugs at imagej.net
          Reporter: steven.cogswell at gmail.com
                CC: steven.cogswell at gmail.com

Opening a Gatan Digital Micrograph .dm3 format file from the "File" -> "Open"
menu will result in a black image with incorrect spatial calibrations (units
are incorrect under "set scale").   "File" -> "Import" -> "DM3 Reader" works
correctly, as does dragging the file in the finder onto the Fiji icon.

Information about your version of Java:

  os.arch => x86_64
  os.name => Mac OS X
  os.version => 10.9.4
  java.version => 1.6.0_65
  java.vendor => Apple Inc.
  java.runtime.name => Java(TM) SE Runtime Environment
  java.runtime.version => 1.6.0_65-b14-462-11M4609
  java.vm.name => Java HotSpot(TM) 64-Bit Server VM
  java.vm.version => 20.65-b04-462
  java.vm.vendor => Apple Inc.
  java.vm.info => mixed mode
  java.awt.graphicsenv => apple.awt.CGraphicsEnvironment
  java.specification.name => Java Platform API Specification
  java.specification.version => 1.6
  sun.cpu.endian => little
  sun.desktop => null
  file.separator => /

The up-to-date check says: REMIND_LATER

Information relevant to JAVA_HOME related problems:

  JAVA_HOME is set to: null
  imagej.dir => /Applications/Fiji.app

Information about the version of each plugin:

Activated update sites:
ImageJ: http://update.imagej.net/ (last check:20140802115300)
Fiji: http://fiji.sc/update/ (last check:20140730150634)

Files not up-to-date:
  673486c6 (LOCAL_ONLY) 20130510132501 plugins/ExtendedDepthField.txt
  0a5c1981 (LOCAL_ONLY) 20130531132531 plugins/steve/Color_Profiler.jar

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