Revision as of 16:12, 24 February 2017 by Eglinger (Add "Fiji Training Notes" from Monash University)
Analyzing fluorescence microscopy images with ImageJ provides detailed information on image analysis using ImageJ.
A textbook for constructing bioimage analysis workflows using ImageJ macro, Matlab and R, to extract numbers out of image data. Freely downloadable from Wiley site.
Fiji Training Notes freely downloadable from the Australian national research and education network.