Difference between revisions of "TrakEM2"

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Revision as of 05:04, 16 October 2008

TrakEM2 (ImageJ)
Author Albert Cardona
File TrakEM2_.jar
Source [1]
Initial release May 2006
Latest version 25 August 2008
Development status active
Category Category:Registration, Category:Segmentation, Category:Annotation
Website [2]

TrakEM2 is an ImageJ plugin for morphological data mining, three-dimensional modeling and image stitching, registration, editing and annotation.

See TrakEM2 snapshots for an overview.

TrakEM2 interacts with the 3D Viewer for visualization of image volumes and 3D meshes.



TrakEM2: 359 montages of 13x13 tiles of 2048x2048 pixels each.
3D Viewer: hardware-accelerated 3D visualization of image stacks as volumes, orthoslices and meshes. Above, secondary lineages of Drosophila third instar larval brain segmented in TrakEM2.