TrakEM2

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TrakEM2 (ImageJ)
Author Albert Cardona
Maintainer
File TrakEM2_.jar
Source [1]
Initial release May 2006
Latest version 25 August 2008
Development status active
Category Category:Registration, Category:Segmentation, Category:Annotation
Website [2]


TrakEM2 is an ImageJ plugin for morphological data mining, three-dimensional modeling and image stitching, registration, editing and annotation.

See TrakEM2 snapshots for an overview.

TrakEM2 interacts with the 3D Viewer for visualization of image volumes and 3D meshes.

Documentation

Examples

TrakEM2: 359 montages of 13x13 tiles of 2048x2048 pixels each.
3D Viewer: hardware-accelerated 3D visualization of image stacks as volumes, orthoslices and meshes. Above, secondary lineages of Drosophila third instar larval brain segmented in TrakEM2.