Difference between revisions of "TopoJ"
Revision as of 12:41, 18 August 2010
The TopoJ plugins help you analyze surfaces of bright objects in image stacks. You can load an example via File>Open Samples>SinteredAlumina (2.6MB):
To see the surface structure, use Plugins>3D Viewer:
To computer the Topography, call Analyze>TopoJ>Compute Topography:
For the sample image, a window value of 5 is appropriate. The result looks like this:
To remove the overall slope of the surface, click on the Analyze>TopoJ>Remove Slope menu item: