Difference between revisions of "Template:Publication"

(Update MaMuT paper now that it is accepted in eLife.)
(Add CellProfiler publicadtions)
Line 96: Line 96:
 
| pages = 1076-1079
 
| pages = 1076-1079
 
| pmid = 20817052}} ({{Scholar | cluster=16814410598979768336}}).
 
| pmid = 20817052}} ({{Scholar | cluster=16814410598979768336}}).
 +
 +
| CellProfiler = {{Citation | last = Carpenter | first = A. E.
 +
| last2 = Jones | first2 = T. R.
 +
| last3 = Lamprecht | first3 = M. R.
 +
| last4 = Clarke | first4 = C.
 +
| last5 = Kang | first5 = I. H.
 +
| last6 = Friman | first6 = O.
 +
| last7 = Guertin | first7 = D. A.
 +
| last8 = Chang | first8 = J. H.
 +
| last9 = Lindquist | first9 = R. A.
 +
| last10 = Moffat | first10 = J.
 +
| last11 = Golland | first11 = P.
 +
| last12 = Sabatini | first12 = D. M.
 +
| year = 2006 Oct 31
 +
| journal = Genome Biology
 +
| url = http://www.biomedcentral.com/1465-6906/7/R100
 +
| title = CellProfiler: image analysis software for identifying and quantifying cell phenotypes
 +
| volume = 7(10)
 +
| pages = R100
 +
| doi = 10.1186/gb-2006-7-10-r100
 +
| pmid = 17076895}} ({{Scholar | cluster=11680963210515374635}}).
 +
 +
| CellProfiler2 = {{Citation | last = Kamentsky | first = L.
 +
| last2 = Jones | first2 = T. R.
 +
| last3 = Fraser | first3 = A.
 +
| last4 = Bray | first4 = M. A.
 +
| last5 = Logan | first5 = D. J.
 +
| last6 = Madden | first6 = K. L.
 +
| last7 = Ljosa | first7 = V.
 +
| last8 = Rueden | first8 = C.
 +
| last9 = Eliceiri = first9 = K. W.
 +
| last10 = Carpenter | first10 = A. E.
 +
| year = 2011 Feb 23
 +
| journal = Bioinformatics
 +
| url = http://bioinformatics.oxfordjournals.org/content/27/8/1179.short
 +
| title = Improved structure, function and compatibility for CellProfiler: modular high-throughput image analysis software
 +
| volume = 27(8)
 +
| pages = 1179-1180
 +
| pmid = 21349861}} ({{Scholar | cluster=16024072332807687249}}).
 +
 +
| CellProfiler3 = {{Citation | last = McQuin | first = C.
 +
| last2 = Goodman | first2 = A.
 +
| last3 = Chernyshev | first3 = V.
 +
| last4 = Kamentsky | first4 = L.
 +
| last5 = Cimini | first5 = B. A.
 +
| last6 = Karhohs | first6 = K. W.
 +
| last7 = Doan | first7 = M.
 +
| last8 = Ding | first8 = L.
 +
| last9 = Rafelski | first9 = S. M.
 +
| last10 = Thirstrup | first10 = D.
 +
| last11 = Wiegraebe | first11 = W.
 +
| last12 = Singh | first12 = S.
 +
| last13 = Becker | first13 = T.
 +
| last14 = Caicedo | first14 = J. C.
 +
| last15 = Carpenter | first15 = A. E.
 +
| year = 2018 Jul 3
 +
| journal = PLOS Biology
 +
| url = http://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.2005970
 +
| title = CellProfiler 3.0: Next-generation image processing for biology
 +
| volume = 16(7)
 +
| pages = e2005970
 +
| doi = 10.1371/journal.pbio.2005970
 +
| pmid = 29969450}} ({{Scholar | cluster=9343647822273300584}}).
  
 
| ClearVolume = {{Citation | last = Royer | first = L. A.
 
| ClearVolume = {{Citation | last = Royer | first = L. A.

Revision as of 21:07, 10 August 2018

Usage

Specify a publication by name.

{{Publication | ImageJ2}}

Rueden, C. T.; Schindelin, J. & Hiner, M. C. et al. (2017), "ImageJ2: ImageJ for the next generation of scientific image data", BMC Bioinformatics 18:529, PMID 29187165, doi:10.1186/s12859-017-1934-z, <https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-017-1934-z> (on Google Scholar).

{{Publication | Fiji}}

Schindelin, J.; Arganda-Carreras, I. & Frise, E. et al. (2012), "Fiji: an open-source platform for biological-image analysis", Nature methods 9(7): 676-682, PMID 22743772, doi:10.1038/nmeth.2019, <http://www.nature.com/nmeth/journal/v9/n7/full/nmeth.2019.html> (on Google Scholar).