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| software = ImageJ/Fiji

| name = Shape Filter Plugin

| author = ~~Thorsten Wagner~~{{Person|Twagner}}| maintainer = ~~Thorsten Wagner (wagner@biomedical-imaging.de)~~{{Person|Twagner}}

| filename = shape_filter_x.y.z.jar [https://github.com/thorstenwagner/ij-shape-filter/releases/latest [1]]

| source = Github [https://github.com/thorstenwagner/ij-shape-filter [2]]

| latest version = v1.4.~~0 ~~2 (~~21 Sep 2015~~14 July 2016)

| status = active

= General Description =

The ImageJ Shape Filter Plugin ~~uses ~~use the [https://github.com/thorstenwagner/ij-blob [ij-blob]] library to characterize and filter objects in binary scenes by its shape. Therefore, several features are calculated as shown below.

[[File:Shape Filter GUI.png|200px|thumb]]

If you like to cite the Shape Filter plugin in a scientific publication, please cite:

Wagner, T and Lipinski, H 2013. IJBlob: An ImageJ Library for Connected Component Analysis and Shape Analysis. Journal of Open Research Software 1(1):e6, DOI: http://dx.doi.org/10.5334/jors.ae

== Shape Features ==

* '''Min. Feret Diameter''': the minimum distance between the two parallel tangents touching the particle outline in all directions.

* '''Max. Inscr. Circle Diameter''': The diameter of the maximum inscribed circle.

* '''Area eq. circle diameter''': Equivalent circle diameter <math>2\sqrt{\frac{A}{\pi}}</math>* '''Long Side Minimum Bounding Rectangle'''(<math>L</math>): The larger side of the minimum bounding rectangle.* '''Short Side Minimum Bounding Rectangle'''(<math>S</math>): The smaller side of the minimum bounding rectangle.

* '''Aspect Ratio''': Defined as <math>L/S</math>

* '''Area to Perimeter Ratio''': Defined as <math>A/P</math>

=Installation=

You could simply use our update site "~~[http://fiji.sc/List_of_update_sites biomedgroup]~~{{ListOfUpdateSites|Biomedgroup}}" to install the shape filter plugin.

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