Difference between revisions of "Skeletonize3D"

Line 3: Line 3:
 
| name                  = Skeletonize3D
 
| name                  = Skeletonize3D
 
| author                = [http://arantxa.ii.uam.es/~iarganda/index_EN.html Ignacio Arganda-Carreras]
 
| author                = [http://arantxa.ii.uam.es/~iarganda/index_EN.html Ignacio Arganda-Carreras]
| filename              =
+
| filename              = [http://imagejdocu.tudor.lu/lib/exe/fetch.php?id=plugin%3Amorphology%3Askeletonize3d%3Astart&cache=cache&media=plugin:morphology:skeletonize3d:skeletonize3d_.jar Skeletonize3D_.jar]
 
| source                = [http://pacific.mpi-cbg.de/cgi-bin/gitweb.cgi?p=fiji.git;a=tree;f=src-plugins/Skeletonize3D_ Skeletonize3D_.java]
 
| source                = [http://pacific.mpi-cbg.de/cgi-bin/gitweb.cgi?p=fiji.git;a=tree;f=src-plugins/Skeletonize3D_ Skeletonize3D_.java]
 
| released              = November 14th, 2008
 
| released              = November 14th, 2008

Revision as of 08:12, 15 November 2008

Skeletonize3D (ImageJ)
Author Ignacio Arganda-Carreras
Maintainer
File Skeletonize3D_.jar
Source Skeletonize3D_.java
Initial release November 14th, 2008
Latest version November 14th, 2008
Development status active
Category Category:Skeleton


2D and 3D skeletonization of binary images.

Smoothed bat cochlea volume
3D skeleton from bat cochlea volume

General Description

Skeletonize3D is a Fiji and ImageJ plugin that performs the skeletonization of 2D and 3D binary images (8-bit images). In Fiji, you can find it under Plugins > Skeleton > Skeletonize (2D/3D).

Related work

This work is an implementation by Ignacio Arganda-Carreras of the 3D thinning algorithm from Lee et al. "Building skeleton models via 3-D medial surface/axis thinning algorithms. Computer Vision, Graphics, and Image Processing, 56(6):462–478, 1994." Based on the ITK version from Hanno Homann: http://hdl.handle.net/1926/1292

License

This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation (http://www.gnu.org/licenses/gpl.txt).

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.