Difference between revisions of "Skeletonize3D"

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|style="vertical-align:top" |[[Image:Smoothed-bat-cochlea-volume.gif|thumb|Bat colochea volume]]
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|style="vertical-align:top" |[[Image:Smoothed-bat-cochlea-volume.gif|thumb|Smoothed bat colochea volume]]
 
|style="vertical-align:top" |[[Image:Skeleton-bat-cochlea-volume.gif|thumb|3D skeleton from bat colochea volume]]
 
|style="vertical-align:top" |[[Image:Skeleton-bat-cochlea-volume.gif|thumb|3D skeleton from bat colochea volume]]
 
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Revision as of 05:59, 15 November 2008

Skeletonize3D (ImageJ)
Author Ignacio Arganda-Carreras
Maintainer
Source Skeletonize3D_.java
Initial release November 14th, 2008
Latest version November 14th, 2008
Development status active
Category Category:Skeleton


2D and 3D skeletonization of binary images.

Smoothed bat colochea volume
3D skeleton from bat colochea volume

General Description

Skeletonize3D is a Fiji and ImageJ plugin that performs the skeletonization of 2D and 3D binary images (8-bit images). In Fiji, you can find it under Plugins > Skeleton > Skeletonize (2D/3D).

Related work

This work is an implementation by Ignacio Arganda-Carreras of the 3D thinning algorithm from Lee et al. "Building skeleton models via 3-D medial surface/axis thinning algorithms. Computer Vision, Graphics, and Image Processing, 56(6):462–478, 1994." Based on the ITK version from Hanno Homann: http://hdl.handle.net/1926/1292

License

This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation (http://www.gnu.org/licenses/gpl.txt).

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.