Difference between revisions of "Learnathon 2018"

(Wednesday: Add Wednesday Ops workshop links)
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* Clone https://github.com/knime-ip/knip-sdk-setup
* Clone https://github.com/knime-ip/knip-sdk-setup
* Clone https://github.com/knime-ip/knip-course
* Clone https://github.com/knime-ip/knip-course
===Developing ImageJ Ops===
* Clone https://github.com/imagej/tutorials (but you already have it, right?)
* Import maven-projects/create-a-new-op in Eclipse.
* See also the [https://imagej.net/Adding_new_ops Adding new ops] guide
* See also the "Extending ImageJ: Ops" notebook linked from [http://imagej.github.io/tutorials here]

Revision as of 04:50, 6 June 2018

The second DAIS Learnathon took place from June 3 until June 9 2018.
This page is the Learnathon Wiki page of last years event!


See this page!

Setting up your system

Check if you have this set up:

  • Eclipse (Neon)
  • bash / zsh
  • GIT
  • Maven
  • Gitter


Intro session...

See slides!

Start a Maven project with Eclipse

Slides online:

Git repos to clone:

  • git@github.com:imagej/example-imagej-command.git

Notes: In case you want to switch to the legacy UI (ImageJ 1), you change the dependencies section in your POM to...


Introduction to ImgLib2

Git repos to clone:

(Slides are contained in the repository.)


ImageJ2 and SciJava

ImageJ2 Ops

ImageJ Legacy

The ImageJ Legacy Course covered the topics: images, tables, regions of interest and command execution.

Jupyter Notebooks


  • See the Git page!



  • Download and install the KNIME Analytics Platform from here

KNIME Development Introduction

Developing ImageJ Ops