Learnathon 2018

Revision as of 03:31, 6 June 2018 by Jug (talk | contribs)

The second DAIS Learnathon took place from June 3 until June 9 2018.
This page is the Learnathon Wiki page of last years event!


See this page!

Setting up your system

Check if you have this set up:

  • Eclipse (Neon)
  • bash / zsh
  • GIT
  • Maven
  • Gitter


Intro session...

See slides!

Start a Maven project with Eclipse

Slides online:

Git repos to clone:

  • git@github.com:imagej/example-imagej-command.git

Notes: In case you want to switch to the legacy UI (ImageJ 1), you change the dependencies section in your POM to...


Introduction to ImgLib2

Git repos to clone:

(Slides are contained in the repository.)


ImageJ2 and SciJava

ImageJ2 Ops

ImageJ Legacy

The ImageJ Legacy Course covered the topics: images, tables, regions of interest and command execution.

Jupyter Notebooks


  • See the Git page!



  • Download and install the KNIME Analytics Platform from here

KNIME Development Introduction