Difference between revisions of "ImgLib2"

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| author                = [[User:Saalfeld|Stephan Saalfeld]] ([mailto:saalfeld@mpi-cbg.de]), [[User:Pietzsch|Tobias Pietzsch]], [[User:StephanP|Stephan Preibisch]], [[User:Rueden|Curtis Rueden]], [http://www.broadinstitute.org/~leek/ Lee Kamentsky], [http://loci.wisc.edu/people/barry-dezonia Barry DeZonia], [[User:Schindelin|Johannes Schindelin]], Christian Dietz, [http://cms.uni-konstanz.de/informatik/berthold/mitglieder/martin-horn/ Martin Horn], [http://rierol.net/ Albert Cardona], Grant Harris, [http://synapses.clm.utexas.edu/lab/lindsey/lindsey.htm Larry Lindsey]
 
| author                = [[User:Saalfeld|Stephan Saalfeld]] ([mailto:saalfeld@mpi-cbg.de]), [[User:Pietzsch|Tobias Pietzsch]], [[User:StephanP|Stephan Preibisch]], [[User:Rueden|Curtis Rueden]], [http://www.broadinstitute.org/~leek/ Lee Kamentsky], [http://loci.wisc.edu/people/barry-dezonia Barry DeZonia], [[User:Schindelin|Johannes Schindelin]], Christian Dietz, [http://cms.uni-konstanz.de/informatik/berthold/mitglieder/martin-horn/ Martin Horn], [http://rierol.net/ Albert Cardona], Grant Harris, [http://synapses.clm.utexas.edu/lab/lindsey/lindsey.htm Larry Lindsey]
 
| maintainer            = see authors
 
| maintainer            = see authors
| source                = [http://fiji.sc/cgi-bin/gitweb.cgi?p=imglib.git]
+
| source                = [http://fiji.sc/imglib.git]
 
| status                = stable, active
 
| status                = stable, active
 
| category              = [[:Category:ImgLib]]
 
| category              = [[:Category:ImgLib]]
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== Resources ==
 
== Resources ==
  
 +
* [http://bioinformatics.oxfordjournals.org/content/28/22/3009.full ImgLib2 paper]
 
* [[ImgLib2 Documentation]]
 
* [[ImgLib2 Documentation]]
 
* [[ImgLib2 Examples]]
 
* [[ImgLib2 Examples]]

Revision as of 13:01, 8 March 2013

Imglib2-logo.png
ImgLib2 (Generic Image Processing for Java)
Author Stephan Saalfeld ([1]), Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Lee Kamentsky, Barry DeZonia, Johannes Schindelin, Christian Dietz, Martin Horn, Albert Cardona, Grant Harris, Larry Lindsey
Maintainer see authors
Source [2]
Development status stable, active
Category Category:ImgLib


ImgLib2 is a general-purpose, multidimensional image processing library.

It provides an interface-driven design that supports numeric and non-numeric data types (8-bit unsigned integer, 32-bit floating point, etc.) in an extensible way. It implements several data sources and sample organizations, including one single primitive array, one array per plane, N-dimensional array "cells" cached to and from disk on demand, and planes read on demand from disk.

Resources

Source code

You can find the source on GitHub. (Or Fiji's server; the repositories are synchronized.)

There is also a Jenkins continuous integration system that builds ImgLib every time the code changes as well as daily including Javadocs.

ImgLib2 vs. ImgLib1

ImgLib1 is the previous incarnation of the library. We encourage developers to use ImgLib2 instead, and migrate existing ImgLib1 programs to ImgLib2 whenever possible.

For an explanation of how ImgLib2 has changed from ImgLib1, see the Changes from ImgLib1 to ImgLib2 page.

See the How To Migrate Code From ImgLib To ImgLib2 page for details on how to update your ImgLib1-based code to use ImgLib2.

Other links