Fiji
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Fiji is an image processing package. It can be described as a "batteries-included" distribution of ImageJ (and ImageJ2), bundling Java, Java3D and a lot of plugins organized into a coherent menu structure. Fiji compares to ImageJ as Ubuntu compares to Linux.
The main focus of Fiji is to assist research in life sciences.
- For users - Fiji is easy to install and has an automatic update function, bundles a lot of plugins and offers comprehensive documentation.
- Developing Fiji - Fiji is an open source project hosted in a Git version control repository, with access to the source code of all internals, libraries and plugins, and eases the development and scripting of plugins.
Download Fiji now 
List of Update sites
How to cite Fiji? Who is citing Fiji?
Collaboration
The Fiji project is driven by a strong desire to improve the tools available for life sciences to process and analyze data. To this end, Fiji collaborates closely with the following projects:
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| ImageJ2 | Bio-Formats | OME | µManager | KNIME |
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News
- 2018-03-16 - Classifying microscope image focus quality with deep learning
- 2018-01-11 - Announcing the new Scientific Community Image Forum
- 2017-12-29 - ImageJ2 and Fiji updated - now with search bar!
- 2017-12-04 - Fiji + KNIP hackathon
- 2017-11-29 - ImageJ2 paper published in BMC Bioinformatics
Subscribe to an RSS or Atom feed of the Fiji news.
Browse the news archive.
Downloads
| Fiji continuous release | ||||||||
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| The latest version of Fiji is automatically and continuously built by the ImageJ Jenkins server. | ||||||||
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All platforms (no JREs) | 
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Windows (32-bit) | 
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OS X | 
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Linux (32-bit) | |
| Windows (64-bit) | Linux (64-bit) | |||||||
See the Downloads page for Life-Line versions, etc. Template:FijiDocsMenu
License
Fiji is released as open source under the GNU General Public License.
Fiji builds on top of the ImageJ2 core, which is licensed under the permissive BSD 2-Clause license.
Plugins and other components have their own licenses.
Help
See also the sidebar on the right.
Contributing
Fiji is supported by several laboratories and institutions:
- LOCI in Madison, Wisconsin, USA, home of ImageJ2 and Bio-Formats.
- The Tomancak Laboratory in Dresden, Germany.
See the Contributors page for a complete list.
Fiji is an open source project, so everybody is welcome to contribute with plugins, patches, bug reports, tutorials, documentation, and artwork.
If you'd like to share any idea or project with us, please contact us via the mailing list or via IRC.
