Difference between revisions of "Fiji"

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[[About|Fiji]] is an image processing package based on [http://rsb.info.nih.gov/ij ImageJ].
 
[[About|Fiji]] is an image processing package based on [http://rsb.info.nih.gov/ij ImageJ].
  
For users, Fiji is [[Downloads|easy to install]] and update, bundles a [[:Category:Plugins|set of plugins]] in a [[Plugins Menu|coherent menu structure]] (and updatable), along with comprehensive documentation.
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For users, Fiji is [[Downloads|easy to install]] and update, bundles a [[:Category:Plugins|set of plugins]] in a [[Plugins Menu|coherent menu structure]] (and updatable), along with comprehensive [[documentation]].
  
 
For [[Developing_Fiji|developers]], Fiji as an open source project is hosted on a git source version control [http://pacific.mpi-cbg.de/cgi-bin/gitweb.cgi repository], with access to the source code of all internals, libraries and plugins, and eases the [[Developing_Fiji|development]] and [[:Category:Scripting|scripting]] of plugins.
 
For [[Developing_Fiji|developers]], Fiji as an open source project is hosted on a git source version control [http://pacific.mpi-cbg.de/cgi-bin/gitweb.cgi repository], with access to the source code of all internals, libraries and plugins, and eases the [[Developing_Fiji|development]] and [[:Category:Scripting|scripting]] of plugins.

Revision as of 10:44, 17 December 2009

Banner-1.jpg

Fiji is an image processing package based on ImageJ.

For users, Fiji is easy to install and update, bundles a set of plugins in a coherent menu structure (and updatable), along with comprehensive documentation.

For developers, Fiji as an open source project is hosted on a git source version control repository, with access to the source code of all internals, libraries and plugins, and eases the development and scripting of plugins.

Download Fiji now Download-arrow.png

News

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Browse the news archive.

Contents

Snapshots

Projects

3D Viewer
  • Hardware-accelerated 3D volume and mesh visualization, and 3D registration of image stacks.
TrakEM2
  • Register/edit/analyze/segment/annotate/3D model terabytes of confocal and electron microscopy images.
Feature Extraction
  • SIFT and MOPS.
Image registration
Stitching 2D/3D
  • Stitch multiple image stacks across X,Y,Z.
Segmentation
Transform
VIB Protocol
  • Label-based 3D alignment of image stacks.
ImageJA
  • The core of Fiji.
Skeletons and tree analysis

Downloads

Template:DownloadsCurrent

See the Downloads page for debian packages and others.

License

Fiji is released under the General Public License.

Each component has its own license.