Difference between revisions of "Dynamic Kymograph"

Line 4: Line 4:
 
| author = {{Person|Rudy Zhou}}
 
| author = {{Person|Rudy Zhou}}
 
| maintainer = {{Person|Rudy Zhou}}
 
| maintainer = {{Person|Rudy Zhou}}
 +
| released = 26 July 2018
 +
| license = {{License|GPL}}
 
| source = {{GitHub|org=rudyzhou|repo=Dynamic_Kymograph}}
 
| source = {{GitHub|org=rudyzhou|repo=Dynamic_Kymograph}}
 +
| category = [[:Category:Plugins|Plugins]]
 
}}
 
}}
  
'Dynamic_Kymograph' is a plugin for ImageJ that generates kymographs from stack videos using key-framing and linear interpolation.
+
Dynamic_Kymograph is a plugin for ImageJ that generates kymographs from stack videos using key-framing and linear interpolation.
  
 
== Features ==
 
== Features ==
Line 16: Line 19:
 
* Generates a kymograph using the interpolated ROI throughout the stack video
 
* Generates a kymograph using the interpolated ROI throughout the stack video
  
== Download ==
+
== Download and Usage ==
  
 +
See [https://github.com/rudyzhou/Dynamic_Kymograph https://github.com/rudyzhou/Dynamic_Kymograph] for download and detailed usage instructions.
  
 +
== Authors ==
  
== Usage ==
+
* Rudy Zhou - [rudyzhou](https://github.com/rudyzhou)
 
 
 
 
  
== Authors ==
+
== Acknowledgements ==
  
* Rudy Zhou - [rudyzhou](https://github.com/rudyzhou)
+
Some code used from [https://imagej.net/Multi_Kymograph Multiple Kymograph Plugin] by Jens Reitdorf, Arne Seitz, and Johannes Schindelin.

Revision as of 12:42, 18 January 2020

Dynamic_Kymograph (Fiji)
Author Rudy Zhou
Maintainer Rudy Zhou
Source on GitHub
Initial release 26 July 2018
Category Plugins


Dynamic_Kymograph is a plugin for ImageJ that generates kymographs from stack videos using key-framing and linear interpolation.

Features

The main features are:

  • Allows user to specify polyline ROIs on multiple frames of a stack video
  • Automatically interpolates between ROIs drawn on different frames
  • Generates a kymograph using the interpolated ROI throughout the stack video

Download and Usage

See https://github.com/rudyzhou/Dynamic_Kymograph for download and detailed usage instructions.

Authors

Acknowledgements

Some code used from Multiple Kymograph Plugin by Jens Reitdorf, Arne Seitz, and Johannes Schindelin.