Difference between revisions of "Colour Deconvolution"

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| name                  = Colour Deconvolution
 
| name                  = Colour Deconvolution
 
| author                = Gabriel Landini
 
| author                = Gabriel Landini
| filename              = [http://www.mecourse.com/landinig/software/colour_deconvolution.zip colour_deconvolution.zip]
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| filename              = {{Maven | g=sc.fiji | a=Colour_Deconvolution}}
| source                = in zip file
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| source                = {{GitHub|org=fiji|repo=Colour_Deconvolution}}
 
| released              = 30 March 2004  
 
| released              = 30 March 2004  
 
| latest version        = 04 February 2007
 
| latest version        = 04 February 2007

Revision as of 11:06, 9 August 2016

Colour Deconvolution (ImageJ)
Author Gabriel Landini
Maintainer
File sc.fiji:Colour_Deconvolution
Source on GitHub
Initial release 30 March 2004
Latest version 04 February 2007
Development status active
Category Color processing
Website [1]

Purpose

Similarly to the command Image  › Color  › RGB split, this plugin unmixes an RGB image produced by subtractive mixing (inks, histological dyes) into separate channels correspondig to up to 3 determined colors. This is useful e.g. to do pigment separation.

Documentation

See Gabriel Landini webpage.

This plugin implements the method described in the following paper:

Ruifrok, A.C. & Johnston, D.A. (2001), "Quantification of histochemical staining by color deconvolution", Anal. Quant. Cytol. Histol. 23: 291-299, PMID 11531144

Version history

  • 30/Mar/2004 released
  • 03/Apr/2004 resolved ROI exiting
  • 07/Apr/2004 added Methyl Green DAB vectors
  • 08/Jul/2004 shortened the code
  • 01/Aug/2005 added fast red/blue/DAB vectors
  • 02/Nov/2005 changed code to work with image stacks (DLC - dchao at fhcrc org)
  • 02/Nov/2005 changed field names so user-defined colours can be set within macros (DLC - dchao at fhcrc org)
  • 04/Feb/2007 1.3 disable popup menu when right clicking

Menu path

Image  › Color  › Colour Deconvolution