Difference between revisions of "BoneJ1"

(Installation)
(Legacy (BoneJ v1.x) Installation)
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== Legacy (BoneJ v1.x) Installation ==
 
== Legacy (BoneJ v1.x) Installation ==
  
{{Logo | ImageJ1 | size=24px}} BoneJ was designed to work with plain [[ImageJ 1.x]].
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{{Logo | ImageJ1 | size=24px}} BoneJ was originally designed to work with plain [[ImageJ 1.x]].
  
 
{{Logo | Fiji | size=24px}} BoneJ can be installed into [[Fiji]], but you must '''use the Java-6 version of Fiji, not the current Java-8 version''':
 
{{Logo | Fiji | size=24px}} BoneJ can be installed into [[Fiji]], but you must '''use the Java-6 version of Fiji, not the current Java-8 version''':

Revision as of 00:49, 27 March 2020

Bonej-icon.png
BoneJ 1.x (ImageJ)
Author Michael Doube
Maintainer Michael Doube
Source on GitHub
Development status Active
Website http://bonej.org/

BoneJ is a plugin for bone image analysis in ImageJ. It provides free, open source tools for trabecular geometry and whole bone shape analysis.

Current release (BoneJ2)

There's a new modernized version of BoneJ available through the ImageJ updater. Read more about BoneJ2.

Legacy (BoneJ v1.x) Installation

Imagej1-icon.png BoneJ was originally designed to work with plain ImageJ 1.x.

Fiji-icon.png BoneJ can be installed into Fiji, but you must use the Java-6 version of Fiji, not the current Java-8 version:

  • Download the final Java-6 version of Fiji labeled “2017 May 30” from here.
  • Unpack it somewhere beneath your home folder.
  • Download and install BoneJ_.jar into that installation's plugins folder.
  • Launch Fiji and run Plugins  › 3D Viewer to trigger installation of the 3D Viewer.
  • Restart Fiji.

For technical details about ImageJ and Fiji using Java 6 vs. Java 8, see the Java 8 page.

BoneJ and pQCT

BoneJ and pQCT plug-ins are in the process of separation. The latter have their own update site, and they don't need BoneJ to work. However, if you download BoneJ_.jar from http://bonej.org/ it still includes older versions of the pQCT tools.

Publication