2018-12-06 - I2K 2018 Dresden Hackathon

Revision as of 08:35, 17 December 2018 by Maarzt (talk | contribs)

From Monday, December 3, 2018 through Friday, December 7, 2018, the Max Planck Institute of Molecular Cell Biology and Genetics hosts ~10 developers at the Center for Systems Biology in Dresden, Germany for a hackathon to develop KNIME Image Processing and ImageJ2/Fiji core infrastructure and plugins.

Gitter channel: https://gitter.im/juglab/Hack1812

Topics / Technical Discussions

Labkit as Labeling Editor for KNIME Image Processing

  • Node for editing labels in KNIME based on Labkit was created.
  • Work is not entirely finish. We plan to finish this work during the Ostrava Hackathon.
  • Labkit was extended, and is now able to handle multiple images.
  • A labeling datatype to store labels, and track modifications was developed.

Simple ImageJ API

  • Discussion between: Deborah, Robert, Curtis, Matthias
  • How can we make the scripting in ImageJ2 easier?

Big Data Server

  • Discussion about a mechanism for secure user authentication in Big Data Server (and ImageJ Server).