Difference between revisions of "2018-12-06 - I2K 2018 Dresden Hackathon"

(Created page with "From Monday, December 3, 2018 through Friday, December 7, 2018, the [https://mpi-cbg.de/ Max Planck Institute of Molecular Cell Biology and Genetics] hosts ~10 developers at t...")
 
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From Monday, December 3, 2018 through Friday, December 7, 2018, the [https://mpi-cbg.de/ Max Planck Institute of Molecular Cell Biology and Genetics] hosts ~10 developers at the [http://www.csbdresden.de/ Center for Systems Biology] in Dresden, Germany for a [[hackathon]] to develop KNIME Image Processing and [[ImageJ2]]/[[Fiji]] core infrastructure and [[plugins]].
 
From Monday, December 3, 2018 through Friday, December 7, 2018, the [https://mpi-cbg.de/ Max Planck Institute of Molecular Cell Biology and Genetics] hosts ~10 developers at the [http://www.csbdresden.de/ Center for Systems Biology] in Dresden, Germany for a [[hackathon]] to develop KNIME Image Processing and [[ImageJ2]]/[[Fiji]] core infrastructure and [[plugins]].
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Gitter channel: https://gitter.im/juglab/Hack1812
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== Topics / Technical Discussions ==
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=== Labkit as Labeling Editor for KNIME Image Processing ===
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* Node for editing labels in KNIME based on [[Labkit]] was created.
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* Work is not entirely finish. We plan to finish this work during the  Ostrava Hackathon.
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* Labkit was extended, and is now able to handle multiple images.
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* A labeling datatype to store labels, and track modifications was developed.
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=== Simple ImageJ API ===
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* Discussion between: Deborah, Robert, Curtis, Matthias
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* How can we make the scripting in ImageJ2 easier?
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=== Big Data Server ===
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* Discussion about a mechanism for secure user authentication in Big Data Server (and ImageJ Server).

Revision as of 08:35, 17 December 2018

From Monday, December 3, 2018 through Friday, December 7, 2018, the Max Planck Institute of Molecular Cell Biology and Genetics hosts ~10 developers at the Center for Systems Biology in Dresden, Germany for a hackathon to develop KNIME Image Processing and ImageJ2/Fiji core infrastructure and plugins.

Gitter channel: https://gitter.im/juglab/Hack1812

Topics / Technical Discussions

Labkit as Labeling Editor for KNIME Image Processing

  • Node for editing labels in KNIME based on Labkit was created.
  • Work is not entirely finish. We plan to finish this work during the Ostrava Hackathon.
  • Labkit was extended, and is now able to handle multiple images.
  • A labeling datatype to store labels, and track modifications was developed.

Simple ImageJ API

  • Discussion between: Deborah, Robert, Curtis, Matthias
  • How can we make the scripting in ImageJ2 easier?

Big Data Server

  • Discussion about a mechanism for secure user authentication in Big Data Server (and ImageJ Server).