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TrakEM2

64 bytes added, 10:04, 8 September 2011
For regenerating mipmaps the fastest possible
<ul>
<li><b>Strategy A</b>: your data consists of large images (over 4000x4000). Right-click on the TrakEM2 display and choose "Project - Properties...", and set the mipmap threads to 1. Now, mipmaps will be regenerated for one single image at a time, using 12 threads (given 12 cores) for computing the Gaussians.<br />Use this strategy as well if your computer has little RAM.</li>
<li><b>Strategy B</b>: your data consists of small images (smaller than 4000x4000). Go to the Fiji window and select "Edit - Options - Memory & Threads...", and set the number of threads to 1. Now, mipmaps will be regenerated for 12 images at a time (given 12 cores), using a single thread for each to compute the Gaussians.</li>
</ul>
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