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SNT: Manual

31 bytes added, 19:01, 13 May 2019
Lists commands for I/O operations. Most are self-explanatory. Noteworthy:
* {{bc|Choose Tracing Image|}} Specifies the image to trace on. To trace on an image currently open in ImageJ, use ''From Open Image...''. A prompt with the currently open images will appear, allowing selection of one. To browse for an image, use ''From File...''. [[Image:SNT-From-Open-Image-Prompt.png|rightleft|thumb|"From Open Image..." prompt]]{{clear}}* {{bc|Import| Labels (AmiraMesh)}} Allows import and rendering of AmiraMesh files, the native file format of the [ Amira] data visualization software. [[Image:SNT-Amira-Mesh-Example-Image.png|rightleft|thumb|AmiraMesh Fly brain]]{{clear}}* {{bc|Import| Remote Databases|}} Allows import of neuronal reconstructions from the [ FlyCircuit], [ MouseLight] and [ NeuroMorpho] remote databases. [[FileImage:SNT-MouseLight-Remote-Loader-Prompt.png|rightleft|thumb|MouseLight reconstruction loader prompt]]{{clear}}
* {{bc|Export (All Paths)}} Allows export of all traced paths in the [ SWC] file format, a widely used standard for representing neuronal reconstructions which is supported by most annotation and visualization software. Additionally, useful numeric properties of paths can be stored in a CSV file by choosing the ''CSV Properties...'' export option.