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Neuroanatomy

511 bytes added, 18:16, 10 February 2017
Mention migrated work to SNT. Update script list
| latest version = '''1.0.6 November 2016''' ({{GitHub|org=tferr|repo=hIPNAT/releases|label=Changelog}})
| category = [[:Category:Plugins|Plugins]], [[:Category:Analysis|Analysis]], [[:Category:Neuroanatomy|Neuroanatomy]]
}}{{ambox | text =This is the main documentation page for the hIPNAT (''Image Processing for NeuroAnatomy and Tree-like Structures'') plugins distributed through the [[User:Neuroanatomy|Neuroanatomy update site]], released in [http://forum.imagej.net/t/launch-of-the-neuroanatomy-update-site/1377?u=tferr April 2016]. For a list of all pages in this wiki related to Neuroanatomy have a look at [[:Category:Neuroanatomy]].  {{ambox | text =Please note that, at this time, these tools are under heavy development: some features are experimental and documentation remains incomplete. Also, some of this work has been meanwhile migrated to core-Fiji plugins, such as [[Simple_Neurite_Tracer|Simple Neurite Tracer]].
}}
|-
|Traces converter
| {{bc|Plugins|NeuroToolsNeuroAnatomy|Convert Traces to SWC}}
| Batch conversion of [[Simple Neurite Tracer]]'s [[Simple_Neurite_Tracer:_.traces_File_Format|.traces files]] into [http://www.neuronland.org/NLMorphologyConverter/MorphologyFormats/SWC/Spec.html SWC].
Implemented as a {{GitHub|org=tferr|repo=hIPNAT|path=src/main/resources/scripts/|label=Python script}}.
|-
|Multi-SWC Renderer
| {{bc|Plugins|NeuroAnatomy|Render Multiple SWC Files}}
| Renders multiple SWC files in a single image canvas or a [[3D_Viewer|3D viewer]] universe.
Implemented as a {{GitHub|org=tferr|repo=hIPNAT|path=src/main/resources/scripts/|label=Python script}}.
|-
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