File list

This special page shows all uploaded files.

File list
 
Date Name Thumbnail Size Description Versions
12:57, 9 March 2011 3-way-view.png (file) 205 KB   1
12:39, 9 March 2011 S3.png (file) 88 KB EM image adjacent to an image with noise (s1) 1
12:39, 9 March 2011 S2.png (file) 93 KB Image image adjacent to an image with noise (s1.png) 1
12:38, 9 March 2011 S1.png (file) 84 KB EM image with noise. 1
13:56, 15 February 2011 Blob-segmentation.jpg (file) 76 KB Snapshot of the plugin "Segment blob in 3D Viewer" 1
21:26, 30 January 2011 TrakEM2-display-2.png (file) 814 KB TrakEM2 showing one section of a serial section transmission electron microscopy (ssTEM) data set, with numerous neuronal arbors reconstructed using [http://www.ini.uzh.ch/~acardona/trakem2_manual.html#trees treelines] and [http://www.ini.uzh.ch/~acar 1
21:17, 30 January 2011 TrakEM2-arealists.png (file) 483 KB Manually segmented neurons and glial cells using TrakEM2's [http://www.ini.uzh.ch/~acardona/trakem2_manual.html#arealists arealist] segmentation type. 1
21:12, 30 January 2011 Neuronal-arbors-1.png (file) 52 KB Neuronal arbors reconstructed using TrakEM2. The [http://www.ini.uzh.ch/~acardona/trakem2_manual.html#trees treeline] segmentation type was used. 1
21:09, 30 January 2011 TrakEM2-arealists-snapshot.png (file) 115 KB Upload TrakEM2-arealists-snapshot.png for TrakEM2-arealists 1
21:05, 30 January 2011 TrakEM2-display-2-snapshot.png (file) 85 KB Upload TrakEM2-display-2-snapshot.png for TrakEM2-display-2 1
15:39, 30 January 2011 TrakEM2 neuronal reconstruction-snapshot.png (file) 49 KB Upload TrakEM2_neuronal_reconstruction-snapshot.png for TrakEM2 neuronal reconstruction 1
18:17, 3 December 2010 Corti-multi-channel.png (file) 120 KB   1
07:41, 6 April 2010 Migrating-macrophages.gif (file) 133 KB Migrating macrophages animation, generated from the example data set by Dirk Sieger. 1
13:16, 2 February 2010 Synaptic-surface-and-vesicles-measurements.png (file) 8 KB   1
13:15, 2 February 2010 Synaptic-surface-and-vesicles.jpg (file) 21 KB   1
15:20, 9 April 2009 Spheres and tubes 3D.jpg (file) 21 KB   1
14:50, 9 April 2009 Profiler-movie.gif (file) 2.76 MB Illustrates the Dynamic ROI Profiler 1
04:32, 30 March 2009 Dai.png (file) 736 bytes Download arrow icon 1
05:44, 16 October 2008 TrakEM2 Display segmentations.png (file) 37 KB ==TrakEM2 Display Segmentations== A TrakEM2 Display, showing an example of each type of segmentation: a Pipe (left), a Ball (center ; 4 points), an AreaList (top-right), and a Profile (bottom). These example segmentations sit over an empty canvas –no 1
05:41, 16 October 2008 TrakEM2 Display.png (file) 411 KB ==TrakEM2 Display== A TrakEM2 display is simply an interactive canvas for viewing and editing the contents of a layer: drag images, register them, add new images by drag and drop, put floating text labels, etc. Within a display any number of layers may b 1
05:37, 16 October 2008 TrakEM2-trees.png (file) 23 KB ==TrakEM2 trees== The main TrakEM2 window shows 3 trees side by side, which provide access to all data stored within TrakEM2. From right to left: * The Layer Tree: from the root layer set, lists all layers and any nested layer sets that these may have. 1
11:49, 15 October 2008 3D-Viewer.jpg (file) 59 KB Hardware-accelerated 3D viewer, supports volumes, surfaces and text. 1
10:46, 15 October 2008 Simple-Neurite-Tracer.jpg (file) 237 KB [http://homepages.inf.ed.ac.uk/s9808248/imagej/tracer/ Simple Neurite Tracer] from Mark Longair, showing a traced secondary lineage of a third instar larva <i>Drosophila</i> brain. 1
10:12, 15 October 2008 Trakem2-snap.jpg (file) 168 KB Montage of 13x13 tiles, 2048x2048 pixels each, made with TrakEM2. 1
10:02, 15 October 2008 Trakem2-snap-small.jpg (file) 6 KB   1
18:48, 12 May 2008 Stack4-2.gif (file) 378 KB   2
18:47, 12 May 2008 Stack4.gif (file) 368 KB   2