<html><head><meta http-equiv="Content-Type" content="text/html charset=us-ascii"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class="">Thanks a lot guys for the explanations. This was very helpful :)<div class=""><br class=""></div><div class="">Cheers,</div><div class="">Steffi<br class=""><div apple-content-edited="true" class="">
<span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: -webkit-auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; "><span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: -webkit-auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; " class=""><div class=""><br class=""></div></div></span></span></div><div style=""><blockquote type="cite" class=""><div class="">On Nov 17, 2014, at 13:48 , Curtis Rueden <<a href="mailto:ctrueden@wisc.edu" class="">ctrueden@wisc.edu</a>> wrote:</div><br class="Apple-interchange-newline"><div class=""><div dir="ltr" class="">Hi Steffi,<div class=""><br class=""></div><div class="">FWIW, I bumped to BF 5.0.6 just now:</div><div class=""><a href="https://github.com/scijava/pom-scijava/commit/931b7add9607d35022432af0f9999cc38661241c" class="">https://github.com/scijava/pom-scijava/commit/931b7add9607d35022432af0f9999cc38661241c</a><br class=""></div><div class=""><br class=""></div><div class="">Regards,</div><div class="">Curtis</div></div><div class="gmail_extra"><br class=""><div class="gmail_quote">On Mon, Nov 17, 2014 at 12:41 PM, Mark Hiner <span dir="ltr" class=""><<a href="mailto:hiner@wisc.edu" target="_blank" class="">hiner@wisc.edu</a>></span> wrote:<br class=""><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr" class="">Hi Stephan,<br class=""><div class=""><span class=""><br class="">>Where is the 5.0.3 defined to which it currently points?<br class=""><br class=""></span><a href="https://github.com/scijava/pom-scijava/blob/master/pom.xml#L191" target="_blank" class="">Here it is</a>! :) It's in pom-scijava to allow any SciJava project to use a consistent version of Bio-Formats.<br class=""><br class=""></div><div class="">Let me know if you have any more questions!<span class="HOEnZb"><font color="#888888" class=""><br class=""><br class=""></font></span></div><span class="HOEnZb"><font color="#888888" class=""><div class="">- Mark<br class=""></div></font></span></div><div class="HOEnZb"><div class="h5"><div class="gmail_extra"><br class=""><div class="gmail_quote">On Mon, Nov 17, 2014 at 12:27 PM, Stephan Preibisch <span dir="ltr" class=""><<a href="mailto:stephan.preibisch@gmx.de" target="_blank" class="">stephan.preibisch@gmx.de</a>></span> wrote:<br class=""><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div style="word-wrap:break-word" class="">Thanks a lot Mark,<div class=""><br class=""></div><div class="">I managed to change the version to 5.0.6.!</div><div class=""><br class=""></div><div class="">Just out of curiosity, I still do not see the bio-formats version being defined in here: <a href="https://github.com/fiji/pom-fiji/blob/master/pom.xml" target="_blank" class="">https://github.com/fiji/pom-fiji/blob/master/pom.xml</a></div><div class=""><br class=""></div><div class="">Where is the 5.0.3 defined to which it currently points?</div><div class=""><br class=""></div><div class="">Thanks so much,</div><div class="">Stephan</div><div class=""><div class=""><div class=""><br class=""><div class=""><blockquote type="cite" class=""><div class="">On Nov 17, 2014, at 13:17 , Mark Hiner <<a href="mailto:hiner@wisc.edu" target="_blank" class="">hiner@wisc.edu</a>> wrote:</div><br class=""><div class=""><div dir="ltr" class=""><div class=""><div class=""><div class="">>The background is that I want to try Bioformats 5.0.6, so I guess
the right thing is to overwrite the version tag inherited from fiji-pom.
I just wanted to see how it is defined in there to actually overwrite
it.<br class=""><br class=""></div>It would be helpful if I finished reading your complete question.<br class=""><br class=""></div>The Bio-Formats dependencies are managed in <a href="https://github.com/scijava/pom-scijava" target="_blank" class="">pom-scijava</a>. You'll want to look at the <properties> and <dependencyManagement> blocks to get a feel how things work. For testing 5.0.6 locally it's also fine to put a <bio-formats.version> property in the pom.xml of the project you're testing.<br class=""><br class=""></div>Best,<br class="">Mark<br class=""></div><div class="gmail_extra"><br class=""><div class="gmail_quote">On Mon, Nov 17, 2014 at 12:12 PM, Mark Hiner <span dir="ltr" class=""><<a href="mailto:hiner@wisc.edu" target="_blank" class="">hiner@wisc.edu</a>></span> wrote:<br class=""><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr" class=""><div class=""><div class="">Hi Stephan,<span class=""><br class=""><br class="">>I think this is maybe a stupid question, but where do I find the parent pom-fiji?<br class=""><br class=""></span>It's always helpful to ask questions on public lists! All of the project poms (fijji, imagej, scijava, scifio) are in their own repo under their respective organization. So pom-fiji is: <br class=""><a href="https://github.com/fiji/pom-fiji" target="_blank" class="">https://github.com/fiji/pom-fiji</a><br class=""><br class=""></div>Also, if you go to an individual organization's page (e.g. <a href="https://github.com/fiji/" target="_blank" class="">https://github.com/fiji/</a>) you can filter the available repositories to look for any component.<br class=""><br class="">Hope that helps!<br class=""><br class=""></div>- Mark<br class=""></div><div class="gmail_extra"><br class=""><div class="gmail_quote"><div class=""><div class="">On Mon, Nov 17, 2014 at 12:06 PM, Stephan Preibisch <span dir="ltr" class=""><<a href="mailto:stephan.preibisch@gmx.de" target="_blank" class="">stephan.preibisch@gmx.de</a>></span> wrote:<br class=""></div></div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div class=""><div class=""><div style="word-wrap:break-word" class="">Hi,<div class=""><br class=""></div><div class="">I think this is maybe a stupid question, but where do I find the parent pom-fiji? The pom.xml in the fiji project itself still defines it as its parent (<a href="https://github.com/fiji/fiji/blob/master/pom.xml" target="_blank" class="">https://github.com/fiji/fiji/blob/master/pom.xml</a>), so I am not sure where to look for it:</div><div class=""><br class=""></div><div class=""><div class=""><parent></div><div class=""><groupId>sc.fiji</groupId></div><div class=""><artifactId>pom-fiji</artifactId></div><div class=""><version>5.1</version></div><div class=""><relativePath /></div><div class=""></parent></div><div class=""><br class=""></div></div><div class="">Eclipse also says it cannot locate the parent pom when clicking on the icon for that.</div><div class=""><br class=""></div><div class="">The background is that I want to try Bioformats 5.0.6, so I guess the right thing is to overwrite the version tag inherited from fiji-pom. I just wanted to see how it is defined in there to actually overwrite it.</div><div class=""><br class=""></div><div class="">Thanks so much,</div><div class="">Steffi</div><br class=""><br class=""><div class="">
<span style="border-collapse:separate;border-spacing:0px" class=""><span style="border-collapse:separate;font-family:Helvetica;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px" class=""><div style="word-wrap:break-word" class=""><div class=""><div class=""><div class="">---</div><div class=""><br class=""></div><div class="">Dr. Stephan Preibisch</div><div class="">HFSP Fellow</div><div class="">Robert H. Singer / Eugene Myers lab</div><div class=""><br class=""></div><div class="">Albert Einstein College of Medicine / HHMI Janelia Farm / MPI-CBG</div><div class=""><br class=""></div><div class="">email: <a href="mailto:stephan.preibisch@einstein.yu.edu" target="_blank" class="">stephan.preibisch@einstein.yu.edu</a> / <a href="mailto:preibischs@janelia.hhmi.org" target="_blank" class="">preibischs@janelia.hhmi.org</a> / <a href="mailto:preibisch@mpi-cbg.de" target="_blank" class="">preibisch@mpi-cbg.de</a></div><div class="">web: <a href="http://fly.mpi-cbg.de/preibisch" target="_blank" class="">http://www.preibisch.net/</a></div></div></div></div></span></span>
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