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    <head>
      <base href="http://fiji.sc/bugzilla/" />
    </head>
    <body><table border="1" cellspacing="0" cellpadding="8">
        <tr>
          <th>Bug ID</th>
          <td><a class="bz_bug_link 
          bz_status_NEW "
   title="NEW --- - ImageJ2 with QuickPalm plugin"
   href="http://fiji.sc/bugzilla/show_bug.cgi?id=639">639</a>
          </td>
        </tr>

        <tr>
          <th>Summary</th>
          <td>ImageJ2 with QuickPalm plugin
          </td>
        </tr>

        <tr>
          <th>Classification</th>
          <td>Unclassified
          </td>
        </tr>

        <tr>
          <th>Product</th>
          <td>Fiji
          </td>
        </tr>

        <tr>
          <th>Version</th>
          <td>unspecified
          </td>
        </tr>

        <tr>
          <th>Hardware</th>
          <td>Other
          </td>
        </tr>

        <tr>
          <th>OS</th>
          <td>Linux
          </td>
        </tr>

        <tr>
          <th>Status</th>
          <td>NEW
          </td>
        </tr>

        <tr>
          <th>Severity</th>
          <td>critical
          </td>
        </tr>

        <tr>
          <th>Priority</th>
          <td>P5
          </td>
        </tr>

        <tr>
          <th>Component</th>
          <td>ImageJ2
          </td>
        </tr>

        <tr>
          <th>Assignee</th>
          <td>imagej-devel@imagej.net
          </td>
        </tr>

        <tr>
          <th>Reporter</th>
          <td>oo370@nyu.edu
          </td>
        </tr>

        <tr>
          <th>Deadline</th>
          <td>2013-07-29
          </td>
        </tr></table>
      <p>
        <div>
        <pre>Created <span class=""><a href="attachment.cgi?id=111" name="attach_111" title="simple macros for testing ImageJ2 with QuickPALM plug-in on the cluster">attachment 111</a> <a href="attachment.cgi?id=111&action=edit" title="simple macros for testing ImageJ2 with QuickPALM plug-in on the cluster">[details]</a></span>
simple macros for testing ImageJ2 with QuickPALM plug-in on the cluster

The resulting images after processing them with ImageJ2 together with QuickPalm
plugin is not the same as images processed with ImageJ together with QuickPalm.
Generally, I have small macros (see attachment) which takes a multi-framed
image, splits the channels and then analyses each channel separately with the
quickPALM plugin. After analysis and reconstruction I save the resulting
images.

I have run this macros both on ImageJ-win64 version of the ImageJ2 (beta
version), and the same macros on ImageJ-linux64 (also beta version). The
resulting images after reconstruction are different while I would expect them
to be identical. 

Also ImageJ-linux64 gives me a warning in the command line: "multichannel image
is required". While ImageJ-win64.exe version of ImageJ2 does not complain and
have the same results as ImageJ1 version.</pre>
        </div>
      </p>
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