[ImageJ-devel] [Bug 841] hyperstack not switching between Z positions

bugzilla at fiji.sc bugzilla at fiji.sc
Mon Jul 14 13:08:55 CDT 2014


http://fiji.sc/bugzilla/show_bug.cgi?id=841

--- Comment #6 from Joshua Kelley <jbkelley at unc.edu> ---
What I mean, precisely, is that I cannot do an apples to apples comparison of
stack to hyperstack transition, and resultant movement through the hyperstack,
because with SCIFIO enabled, I cannot import the same images that I was
converting from stack to hyperstack, and then trying to navigate through.  

I am importing 145 16 bit .tif files, each of which has 6 layers.  With SCIFIO
enabled, it seems to be picking multiple channels, and opening a subset of the
time points it should be, and then it opens one image a couple thousand times.  

This is a problem with SCIFIO importing though, so I assume it is not
applicable to this specific bug.  It did appear that I could navigate the z
dimension properly after converting to a hyperstack, but SCIFIO opened many of
the same images over and over again, so it would formally be possible for me to
not see certain types of errors.

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