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<base href="http://fiji.sc/bugzilla/" />
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<body><table border="1" cellspacing="0" cellpadding="8">
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<th>Bug ID</th>
<td><a class="bz_bug_link
bz_status_NEW "
title="NEW - Difference in pixel integration"
href="http://fiji.sc/bugzilla/show_bug.cgi?id=1245">1245</a>
</td>
</tr>
<tr>
<th>Summary</th>
<td>Difference in pixel integration
</td>
</tr>
<tr>
<th>Product</th>
<td>Fiji
</td>
</tr>
<tr>
<th>Version</th>
<td>unspecified
</td>
</tr>
<tr>
<th>Hardware</th>
<td>PC
</td>
</tr>
<tr>
<th>OS</th>
<td>Windows
</td>
</tr>
<tr>
<th>Status</th>
<td>NEW
</td>
</tr>
<tr>
<th>Severity</th>
<td>normal
</td>
</tr>
<tr>
<th>Priority</th>
<td>P4
</td>
</tr>
<tr>
<th>Component</th>
<td>Plugins
</td>
</tr>
<tr>
<th>Assignee</th>
<td>imagej-bugs@imagej.net
</td>
</tr>
<tr>
<th>Reporter</th>
<td>jhatcher@wisc.edu
</td>
</tr>
<tr>
<th>CC</th>
<td>jhatcher@wisc.edu
</td>
</tr></table>
<p>
<div>
<pre>In the uploaded image, there are two light spots and two dark spots. If I do
pixel integration on only the two light spots, I get
1) 10345.196
2) 11823.095.
If I then reset and integrate all 4 spots using the same selection box, I get
1) 3921.276
2) 4440.347
3) 15793.388
4) 16380.217
Why would the lighter spots integrate so much less when denser spots are
included in the measurements?
Information about your version of Java:
os.arch => amd64
os.name => Windows Vista
os.version => 6.0
java.version => 1.8.0_66
java.vendor => Oracle Corporation
java.runtime.name => Java(TM) SE Runtime Environment
java.runtime.version => 1.8.0_66-b18
java.vm.name => Java HotSpot(TM) 64-Bit Server VM
java.vm.version => 25.66-b18
java.vm.vendor => Oracle Corporation
java.vm.info => mixed mode
java.awt.graphicsenv => sun.awt.Win32GraphicsEnvironment
java.specification.name => Java Platform API Specification
java.specification.version => 1.8
sun.cpu.endian => little
sun.desktop => windows
file.separator => \
The up-to-date check says: PROTECTED_LOCATION
Information relevant to JAVA_HOME related problems:
JAVA_HOME is set to:
C:\PROGRA~1\FIJI-I~1\Fiji.app/java/win64/jdk1.8.0_66//jre
imagej.dir => C:\PROGRA~1\FIJI-I~1\Fiji.app
Information about the version of each plugin:
Activated update sites:
ImageJ: <a href="http://update.imagej.net/">http://update.imagej.net/</a> (last check:20160121055533)
Fiji: <a href="http://update.fiji.sc/">http://update.fiji.sc/</a> (last check:20160114142236)
Java-8: <a href="http://sites.imagej.net/Java-8/">http://sites.imagej.net/Java-8/</a> (last check:20160121051645)
Files not up-to-date:
13cf8fb2 (LOCAL_ONLY) 20160130185708 luts/glasbey_inverted.lut
cad84490 (MODIFIED) 20160130185708 plugins/Examples/Fiji_Logo_3D.js
a725934c (MODIFIED) 20160130185708
plugins/Scripts/Plugins/Registration/Correct_3D_drift.py</pre>
</div>
</p>
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