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<b><a class="bz_bug_link
bz_status_FIXPENDING "
title="FIXPENDING - Stack Rendering Slow"
href="http://fiji.sc/bugzilla/show_bug.cgi?id=1211#c3">Comment # 3</a>
on <a class="bz_bug_link
bz_status_FIXPENDING "
title="FIXPENDING - Stack Rendering Slow"
href="http://fiji.sc/bugzilla/show_bug.cgi?id=1211">bug 1211</a>
from <span class="vcard"><a class="email" href="mailto:hinerm@gmail.com" title="Mark Hiner <hinerm@gmail.com>"> <span class="fn">Mark Hiner</span></a>
</span></b>
<pre><span class="quote">>This however resulted in FIJI no longer being able to open.</span >
Oh, I'm very sorry. I just tested on a co-worker's computer and it looks like
that file is downloaded without execution permissions - despite being set on
the server.
After replacing the file, you can fix these permissions by opening up a
Terminal and running:
chmod a+x /path/to/Fiji.app/Conents/MacOS/ImageJ-macosx
If you'd like, you can read more about chmod here:
<a href="http://ss64.com/osx/chmod.html">http://ss64.com/osx/chmod.html</a>. Essentially you're just telling the computer
that "yes, this file has permission to be executed."
<span class="quote">>It is in the Library/INternet Plug-Ins/ and is a JavaAppletPluggin.plugin</span >
Fiji is supposed to look for Java in that location. The problem comes from
false negatives in Fiji's detection of Java, due to changes in file structure
between Java 1.6 and 1.7+. That's precisely what is fixed in the experimental
ImageJ-macosx file I had you download, so I'm hoping it will still work for you
if you chmod the file.</pre>
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