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            <b><a class="bz_bug_link 

          bz_status_RESOLVED  bz_closed"

   title="RESOLVED WONTFIX - ij.process.AutoThresholder and fiji.threshold.Auto_Threshold return different values"

   href="http://fiji.sc/bugzilla/show_bug.cgi?id=1183#c3">Comment # 3</a>

              on <a class="bz_bug_link 

          bz_status_RESOLVED  bz_closed"

   title="RESOLVED WONTFIX - ij.process.AutoThresholder and fiji.threshold.Auto_Threshold return different values"

   href="http://fiji.sc/bugzilla/show_bug.cgi?id=1183">bug 1183</a>

              from <span class="vcard"><a class="email" href="mailto:wsr@nih.gov" title="Wayne Rasband <wsr@nih.gov>"> <span class="fn">Wayne Rasband</span></a>

</span></b>

        <pre>Here is an example that shows how to get the threshold of an entire stack:


  imp = IJ.openImage("<a href="http://imagej.nih.gov/ij/images/t1-head.zip">http://imagej.nih.gov/ij/images/t1-head.zip</a>");

  IJ.setAutoThreshold(imp, "Default dark stack");

  ip = imp.getProcessor();

  print("threshold: "+ip.getMinThreshold());


I used the command recorder (Plugins>Macros>Record) to generate the first two

lines of code.</pre>

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