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<base href="http://fiji.sc/bugzilla/" />
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<th>Bug ID</th>
<td><a class="bz_bug_link
bz_status_NEW "
title="NEW - Threshold value in Trackmate is not stricktly used while tracking particles. most of the time particles considered in tracking analysis have intensity values much lower than the threshold value set before starting the analysis."
href="http://fiji.sc/bugzilla/show_bug.cgi?id=1160">1160</a>
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<th>Summary</th>
<td>Threshold value in Trackmate is not stricktly used while tracking particles. most of the time particles considered in tracking analysis have intensity values much lower than the threshold value set before starting the analysis.
</td>
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<th>Product</th>
<td>Fiji
</td>
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<th>Version</th>
<td>unspecified
</td>
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<th>Hardware</th>
<td>PC
</td>
</tr>
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<th>OS</th>
<td>Windows
</td>
</tr>
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<th>Status</th>
<td>NEW
</td>
</tr>
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<th>Severity</th>
<td>normal
</td>
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<th>Priority</th>
<td>P4
</td>
</tr>
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<th>Component</th>
<td>Plugins
</td>
</tr>
<tr>
<th>Assignee</th>
<td>imagej-bugs@imagej.net
</td>
</tr>
<tr>
<th>Reporter</th>
<td>deepika.sharma@unibas.ch
</td>
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<th>CC</th>
<td>deepika.sharma@unibas.ch
</td>
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<pre>Trackmate.
Threshold value is not used stricktly during the tracking of particles.
Problematic when user requires specific particles to track.
Information about your version of Java:
os.arch => amd64
os.name => Windows 7
os.version => 6.1
java.version => 1.6.0_24
java.vendor => Sun Microsystems Inc.
java.runtime.name => Java(TM) SE Runtime Environment
java.runtime.version => 1.6.0_24-b07
java.vm.name => Java HotSpot(TM) 64-Bit Server VM
java.vm.version => 19.1-b02
java.vm.vendor => Sun Microsystems Inc.
java.vm.info => mixed mode
java.awt.graphicsenv => sun.awt.Win32GraphicsEnvironment
java.specification.name => Java Platform API Specification
java.specification.version => 1.6
sun.cpu.endian => little
sun.desktop => windows
file.separator => \
The up-to-date check says: REMIND_LATER
Information relevant to JAVA_HOME related problems:
JAVA_HOME is set to: C:\Tools\FID6A6~1.APP/java/win64/jdk1.6.0_24//jre
imagej.dir => C:\Tools\FID6A6~1.APP
Information about the version of each plugin:
Activated update sites:
ImageJ: <a href="http://update.imagej.net/">http://update.imagej.net/</a> (last check:20150915154157)
Fiji: <a href="http://update.fiji.sc/">http://update.fiji.sc/</a> (last check:20150910233236)
Bio-Formats: <a href="http://sites.imagej.net/Bio-Formats/">http://sites.imagej.net/Bio-Formats/</a> (last check:20150912032644)
BioVoxxel: <a href="http://sites.imagej.net/BioVoxxel/">http://sites.imagej.net/BioVoxxel/</a> (last check:20150819111801)
HDF5: <a href="http://sites.imagej.net/Ronneber/">http://sites.imagej.net/Ronneber/</a> (last check:20150214134119)
IBMP-CNRS: <a href="http://www-ibmp.u-strasbg.fr/fijiupdates/">http://www-ibmp.u-strasbg.fr/fijiupdates/</a> (last
check:20150318110643)
IMCF Uni Basel: <a href="http://sites.imagej.net/UniBas-IMCF/">http://sites.imagej.net/UniBas-IMCF/</a> (last
check:20150628195511)
LOCI: <a href="http://sites.imagej.net/LOCI/">http://sites.imagej.net/LOCI/</a> (last check:20150428235912)
Ehrenfeu: <a href="http://sites.imagej.net/Ehrenfeu/">http://sites.imagej.net/Ehrenfeu/</a> (last check:20150127151701)
Files not up-to-date:
53318765 (UPDATEABLE) 20150914131925 jars/imagej-2.0.0-rc-38.jar
2775ecd7 (UPDATEABLE) 20150914131926 jars/imagej-plugins-commands-0.5.2.jar
94d7c287 (UPDATEABLE) 20150914131927 jars/imagej-ui-swing-0.14.0.jar
ef093e5d (UPDATEABLE) 20150628195950 jars/rsyntaxtextarea-2.5.6.jar
1dbc6331 (LOCAL_ONLY) 20150603213848 plugins/Imaris/ImarisBridgeUtils.jar
eb679ca0 (LOCAL_ONLY) 20150603213848 plugins/Imaris/Imaris_Bridge81.jar</pre>
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