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<base href="http://fiji.sc/bugzilla/" />
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<body><table border="1" cellspacing="0" cellpadding="8">
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<th>Bug ID</th>
<td><a class="bz_bug_link
bz_status_NEW "
title="NEW - Running Gaussian Blur filter from script editor broken - does not overwrite existing sigma + scaling settings in GUI"
href="http://fiji.sc/bugzilla/show_bug.cgi?id=1129">1129</a>
</td>
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<tr>
<th>Summary</th>
<td>Running Gaussian Blur filter from script editor broken - does not overwrite existing sigma + scaling settings in GUI
</td>
</tr>
<tr>
<th>Product</th>
<td>Fiji
</td>
</tr>
<tr>
<th>Version</th>
<td>unspecified
</td>
</tr>
<tr>
<th>Hardware</th>
<td>Macintosh
</td>
</tr>
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<th>OS</th>
<td>Mac OS
</td>
</tr>
<tr>
<th>Status</th>
<td>NEW
</td>
</tr>
<tr>
<th>Severity</th>
<td>normal
</td>
</tr>
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<th>Priority</th>
<td>P4
</td>
</tr>
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<th>Component</th>
<td>Plugins
</td>
</tr>
<tr>
<th>Assignee</th>
<td>imagej-bugs@imagej.net
</td>
</tr>
<tr>
<th>Reporter</th>
<td>celinaeg@uw.edu
</td>
</tr>
<tr>
<th>CC</th>
<td>celinaeg@uw.edu
</td>
</tr></table>
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<pre>It looks like when using the script editor to run Gaussian Blur filter, the
macro interpreter doesn't capture the sigma parameter. When running GB through
the ImageJ GUI, everything works fine, but when I run GB through the editor the
sigma that was already in the GUI is the sigma that is used.
Here's the basic code that I'm using:
IJ.run(imp, "Gaussian Blur...", "sigma = 0.0001 scaled")
Information about your version of Java:
os.arch => x86_64
os.name => Mac OS X
os.version => 10.9.5
java.version => 1.7.0_21
java.vendor => Oracle Corporation
java.runtime.name => Java(TM) SE Runtime Environment
java.runtime.version => 1.7.0_21-b12
java.vm.name => Java HotSpot(TM) 64-Bit Server VM
java.vm.version => 23.21-b01
java.vm.vendor => Oracle Corporation
java.vm.info => mixed mode
java.awt.graphicsenv => sun.awt.CGraphicsEnvironment
java.specification.name => Java Platform API Specification
java.specification.version => 1.7
sun.cpu.endian => little
sun.desktop => null
file.separator => /
The up-to-date check says: UP_TO_DATE
Information relevant to JAVA_HOME related problems:
JAVA_HOME is set to: /Library/Internet
Plug-Ins/JavaAppletPlugin.plugin/Contents/Home/
imagej.dir => /Applications/Fiji.app
Information about the version of each plugin:
Activated update sites:
ImageJ: <a href="http://update.imagej.net/">http://update.imagej.net/</a> (last check:20150722045527)
Fiji: <a href="http://fiji.sc/update/">http://fiji.sc/update/</a> (last check:20150724215809)
Files not up-to-date:
590a0a03 (LOCAL_ONLY) 20150727141828 macros/BatchMacro.ijm</pre>
</div>
</p>
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