<html>
<head>
<base href="http://fiji.sc/bugzilla/" />
</head>
<body><table border="1" cellspacing="0" cellpadding="8">
<tr>
<th>Bug ID</th>
<td><a class="bz_bug_link
bz_status_NEW "
title="NEW - Java 3D viewer does not launch on OSX"
href="http://fiji.sc/bugzilla/show_bug.cgi?id=1096">1096</a>
</td>
</tr>
<tr>
<th>Summary</th>
<td>Java 3D viewer does not launch on OSX
</td>
</tr>
<tr>
<th>Product</th>
<td>Fiji
</td>
</tr>
<tr>
<th>Version</th>
<td>unspecified
</td>
</tr>
<tr>
<th>Hardware</th>
<td>Macintosh
</td>
</tr>
<tr>
<th>OS</th>
<td>Mac OS
</td>
</tr>
<tr>
<th>Status</th>
<td>NEW
</td>
</tr>
<tr>
<th>Severity</th>
<td>normal
</td>
</tr>
<tr>
<th>Priority</th>
<td>P4
</td>
</tr>
<tr>
<th>Component</th>
<td>Plugins
</td>
</tr>
<tr>
<th>Assignee</th>
<td>imagej-bugs@imagej.net
</td>
</tr>
<tr>
<th>Reporter</th>
<td>christophe.leterrier@gmail.com
</td>
</tr>
<tr>
<th>CC</th>
<td>christophe.leterrier@gmail.com
</td>
</tr></table>
<p>
<div>
<pre>Using newer Fiji under OSX Yosemite (with the new launcher oand Java 1.8)
Launching the 3D viewer results in the following message in the console:
version = 1.5
Exception in thread "J3D-Renderer-1" java.lang.NoClassDefFoundError:
apple/awt/ComponentModel
at com.sun.opengl.impl.JAWT_DrawingSurface.GetDrawingSurfaceInfo0(Native
Method)
at
com.sun.opengl.impl.JAWT_DrawingSurface.GetDrawingSurfaceInfo(JAWT_DrawingSurface.java:56)
at
com.sun.opengl.impl.macosx.MacOSXOnscreenGLDrawable$1.run(MacOSXOnscreenGLDrawable.java:165)
at java.security.AccessController.doPrivileged(Native Method)
at
com.sun.opengl.impl.macosx.MacOSXOnscreenGLDrawable.lockSurface(MacOSXOnscreenGLDrawable.java:163)
at
com.sun.opengl.impl.macosx.MacOSXOnscreenGLContext.makeCurrentImpl(MacOSXOnscreenGLContext.java:57)
at com.sun.opengl.impl.GLContextImpl.makeCurrent(GLContextImpl.java:134)
at javax.media.j3d.JoglPipeline$QueryCanvas.doQuery(JoglPipeline.java:9030)
at
javax.media.j3d.JoglPipeline.getBestConfiguration(JoglPipeline.java:8778)
at javax.media.j3d.Renderer.doWork(Renderer.java:495)
at javax.media.j3d.J3dThread.run(J3dThread.java:256)
Caused by: java.lang.ClassNotFoundException: apple.awt.ComponentModel
at java.net.URLClassLoader.findClass(URLClassLoader.java:381)
at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
... 11 more
Information about your version of Java:
os.arch => x86_64
os.name => Mac OS X
os.version => 10.10.3
java.version => 1.8.0_45
java.vendor => Oracle Corporation
java.runtime.name => Java(TM) SE Runtime Environment
java.runtime.version => 1.8.0_45-b14
java.vm.name => Java HotSpot(TM) 64-Bit Server VM
java.vm.version => 25.45-b02
java.vm.vendor => Oracle Corporation
java.vm.info => mixed mode
java.awt.graphicsenv => sun.awt.CGraphicsEnvironment
java.specification.name => Java Platform API Specification
java.specification.version => 1.8
sun.cpu.endian => little
sun.desktop => null
file.separator => /
The up-to-date check says: REMIND_LATER
Information relevant to JAVA_HOME related problems:
JAVA_HOME is set to:
/Library/Java/JavaVirtualMachines/jdk1.8.0_45.jdk/Contents/Home//jre
imagej.dir => /Users/christo/Travail/Labo/Processing/Fiji_current/Fiji.app
Information about the version of each plugin:
Activated update sites:
ImageJ: <a href="http://update.imagej.net/">http://update.imagej.net/</a> (last check:20150618000647)
Fiji: <a href="http://fiji.sc/update/">http://fiji.sc/update/</a> (last check:20150617220654)
BAR: <a href="http://sites.imagej.net/Tiago/">http://sites.imagej.net/Tiago/</a> (last check:20150604164025)
Biomedgroup: <a href="http://sites.imagej.net/Biomedgroup/">http://sites.imagej.net/Biomedgroup/</a> (last check:20150503123038)
DiameterJ: <a href="http://sites.imagej.net/DiameterJ/">http://sites.imagej.net/DiameterJ/</a> (last check:20150123222550)
GDSC-SMLM: <a href="http://sites.imagej.net/GDSC-SMLM/">http://sites.imagej.net/GDSC-SMLM/</a> (last check:20150327132750)
PTBIOP: <a href="http://biop.epfl.ch/Fiji-Update/">http://biop.epfl.ch/Fiji-Update/</a> (last check:20150616143734)
Files not up-to-date:
2418366b (MODIFIED) 20150526101715 Contents/Info.plist
1ad3be0d (LOCAL_ONLY) 20140925172353 jars/jpedalSTD.jar
953fe5a5 (LOCAL_ONLY) 20150527153548 luts/ThunderSTORM.lut
c1503832 (LOCAL_ONLY) 20150210161301 luts/parula.lut
ebd9888a (MODIFIED) 20130910230945 macros/StartupMacros.fiji.ijm
37d3408d (LOCAL_ONLY) 20130910230945 macros/StartupMacros.fiji_stock.ijm
d1606fa9 (LOCAL_ONLY) 20150119165712 macros/myTool.txt
1e948734 (LOCAL_ONLY) 20140423133536 macros/toolsets/3D_AIS_Measure.ijm
39bf367e (LOCAL_ONLY) 20150202162414 macros/toolsets/ChriSTORM.ijm
dca2b75a (LOCAL_ONLY) 20121116182554 macros/toolsets/Intensity Ratios
Tools.ijm
d28c5f20 (LOCAL_ONLY) 20140331210831 macros/toolsets/PeakFinder_Tool.txt
e9cc69cf (LOCAL_ONLY) 20140116225135 macros/toolsets/Simple AIS Measure
Tools.ijm
491f95aa (LOCAL_ONLY) 20120531234749 macros/toolsets/Test_Shortcut.ijm
b4343d06 (LOCAL_ONLY) 20150130092313
plugins/ChriSTORM/Batch_Add_Z_Uncertainty.js
b64896ea (LOCAL_ONLY) 20150618104605 plugins/ChriSTORM/Batch_NS_to_TS.js
54f383d2 (LOCAL_ONLY) 20150217185734 plugins/ChriSTORM/Batch_Process_Locs.ijm
9b110ba8 (LOCAL_ONLY) 20150128154352
plugins/ChriSTORM/Batch_Remove_Extreme_Z.ijm
fb1cf5ae (LOCAL_ONLY) 20150605183711 plugins/ChriSTORM/Batch_Warp_Channels.js
a5aead38 (LOCAL_ONLY) 20150128144443 plugins/ChriSTORM/F-NStxtSplit.js
dae326fc (LOCAL_ONLY) 20150618103328 plugins/ChriSTORM/F-NStxtTranslate.js
0f33f0d1 (LOCAL_ONLY) 20150130092313 plugins/ChriSTORM/F-TSAddZUnc.js
c01157dc (LOCAL_ONLY) 20150513134620 plugins/ChriSTORM/F-TSRotate.js
9fce7546 (LOCAL_ONLY) 20150618103622 plugins/ChriSTORM/F-TSTranslate.js
065b9f7d (LOCAL_ONLY) 20150130092313 plugins/ChriSTORM/F-TSWarp.js
7354eee5 (LOCAL_ONLY) 20150605144943
plugins/ChriSTORM/Generate_Reconstructions.ijm
95fd7c62 (LOCAL_ONLY) 20150605145059
plugins/ChriSTORM/Generate_Zoom&Slices.ijm
10436835 (LOCAL_ONLY) 20150129185850 plugins/ChriSTORM/Get_Z_Range.js
06a2cbc2 (LOCAL_ONLY) 20150130092313
plugins/ChriSTORM/Single_Add_Z_Uncertainty.js
c08a3f2d (LOCAL_ONLY) 20150130092313 plugins/ChriSTORM/Single_Get_Z_Range.js
c23ad61f (LOCAL_ONLY) 20150130092313 plugins/ChriSTORM/Single_NS_split.js
01fff67b (LOCAL_ONLY) 20150618104614 plugins/ChriSTORM/Single_NS_to_TS.js
6d2ebbdd (LOCAL_ONLY) 20150130092314 plugins/ChriSTORM/Single_Rotate_Locs.js
c3d2eb4c (LOCAL_ONLY) 20141027102052 plugins/ChriSTORM/Slice_to_Zoom_ROI.ijm
de9b2ed2 (LOCAL_ONLY) 20150527160500 plugins/ChriSTORM/newSyntax.ijm
55958f35 (LOCAL_ONLY) 20150618103442 plugins/Thunder_STORM.jar
f58c5b2e (LOCAL_ONLY) 20131105141630 plugins/added
macros/Calculate_Ratios.ijm
b70ea00d (LOCAL_ONLY) 20150121171007 plugins/added
macros/Calculate_Ratios_2.ijm
c73c63d4 (LOCAL_ONLY) 20120203190735 plugins/added macros/Calib_EMGain.ijm
23565f48 (LOCAL_ONLY) 20120123170343 plugins/added
macros/Convert_Image_to_Icon.ijm
36c6bbff (LOCAL_ONLY) 20150121103457 plugins/added
macros/Convert_ndf_to_ROI.ijm
5759d835 (LOCAL_ONLY) 20140306191916 plugins/added
macros/Correct_&_Split_Channels.ijm
1e1afbf4 (LOCAL_ONLY) 20140517214448 plugins/added
macros/Duplicate_wLabel.ijm
6a5e9f21 (LOCAL_ONLY) 20120120190326 plugins/added macros/Edit_Cat_ROIs.ijm
d0ae64a9 (LOCAL_ONLY) 20120523184024 plugins/added macros/Extract_LIF.ijm
681f02d5 (LOCAL_ONLY) 20140423133537 plugins/added macros/Extract_Zeiss.ijm
fa330291 (LOCAL_ONLY) 20130530200036 plugins/added macros/Generate_Comets.ijm
b4baa60d (LOCAL_ONLY) 20130908215841 plugins/added macros/Generate_Kymos.ijm
40277102 (LOCAL_ONLY) 20140624222024 plugins/added
macros/Generate_Stacks_Folder.ijm
d4e49dd3 (LOCAL_ONLY) 20121116182556 plugins/added
macros/Generate_Tracings_Folder_monoCh.ijm
d1f51ed7 (LOCAL_ONLY) 20150320102620 plugins/added
macros/Generate_Tracings_Folder_multiCh.ijm
aa4dfffd (LOCAL_ONLY) 20140211211257 plugins/added
macros/Make_Projections.ijm
6b42d1ed (LOCAL_ONLY) 20120203190735 plugins/added macros/Mean_vs_SD.ijm
951f3d28 (LOCAL_ONLY) 20150323122536 plugins/added
macros/Measure_Intensities.ijm
ec2b207d (LOCAL_ONLY) 20120120190326 plugins/added macros/Normalize_Movie.ijm
44725a89 (LOCAL_ONLY) 20120120190326 plugins/added
macros/Pad_Image_to_Stack.ijm
848b3f14 (LOCAL_ONLY) 20140201140529 plugins/added macros/Plot_Column.ijm
cf33bc89 (LOCAL_ONLY) 20130419214758 plugins/added
macros/RGB_Profiles_Tool.ijm
a04dd29d (LOCAL_ONLY) 20120120190326 plugins/added
macros/Register_Coverslip_Zeiss.ijm
464c88ea (LOCAL_ONLY) 20120120190326 plugins/added macros/Running_Average.ijm
7eec215c (LOCAL_ONLY) 20120928172722 plugins/added
macros/Simple_AIS_Measure.ijm
61572565 (LOCAL_ONLY) 20130506225216 plugins/added
macros/Simple_AIS_Measure_new.ijm
d3faf6a6 (LOCAL_ONLY) 20120120190326 plugins/added
macros/Stitch_Processed_Mosaic.ijm
4a24763e (LOCAL_ONLY) 20120120190326 plugins/added macros/Transfer_Labels.ijm
3e4083ae (LOCAL_ONLY) 20140829213750 plugins/added
plugins/Actin2_Quantifier.class
3fb5f7a5 (LOCAL_ONLY) 20060922124728 plugins/added plugins/Align_4.class
ac3d73f5 (LOCAL_ONLY) 20130502205606 plugins/added
plugins/Align_RGB_planes.jar
f0aabf4f (LOCAL_ONLY) 20141204110724 plugins/added plugins/Align_Slice.class
819f350a (LOCAL_ONLY) 20140813222136 plugins/added plugins/Cidre_Plugin.jar
0a5c1981 (LOCAL_ONLY) 20130419214758 plugins/added plugins/Color_Profiler.jar
c60c5966 (LOCAL_ONLY) 20131115215344 plugins/added plugins/FIRE_plugin.jar
66f0be96 (LOCAL_ONLY) 20120120190326 plugins/added
plugins/Fast_Filters$1.class
7b74cdd1 (LOCAL_ONLY) 20120120190326 plugins/added plugins/Fast_Filters.class
e9e5c061 (LOCAL_ONLY) 20140129213842 plugins/added
plugins/Image_Stabilizer.class
1fd3d1a6 (LOCAL_ONLY) 20140219221145 plugins/added
plugins/Image_Stabilizer_Log_Applier.class
a7eaa6cb (LOCAL_ONLY) 20140929103108 plugins/added
plugins/KymoResliceWide_.jar
a5d02cb7 (LOCAL_ONLY) 20140929103541 plugins/added plugins/Kymo_graph1001.jar
dad4b299 (LOCAL_ONLY) 20130731193228 plugins/added plugins/M2LE_Pipeline.jar
f07dd15c (LOCAL_ONLY) 20120120190326 plugins/added plugins/NeuronJ_.jar
2b0f8e5e (LOCAL_ONLY) 20130419214758 plugins/added plugins/Radial_Profile.jar
15638c2e (LOCAL_ONLY) 20140331202439 plugins/added
plugins/Radial_Profile_Angle_Ext.jar
050d136b (LOCAL_ONLY) 20150116121620 plugins/added plugins/SOS_release.jar
97813c51 (LOCAL_ONLY) 20130331152055 plugins/added
plugins/Sigma_Filter_Plus.class
be06fe59 (LOCAL_ONLY) 20140929103634 plugins/added plugins/action_bar202.jar
5229937c (LOCAL_ONLY) 20120120190326 plugins/added
plugins/mm_nd_and_roi_pack.jar
b551b948 (LOCAL_ONLY) 20150526101715 plugins/added scripts/Autocorr.js
8fa95c18 (LOCAL_ONLY) 20140916183646 plugins/added scripts/Fit_Sinus.js
65cc7812 (LOCAL_ONLY) 20150526101715 plugins/added scripts/Fit_Sinus_AC.js
216ea972 (LOCAL_ONLY) 20150324111144 plugins/added
scripts/Get_by_Conditions.js
9b45a4b8 (LOCAL_ONLY) 20150527154338 plugins/added scripts/Make_TS_LUT.js
f75d3f54 (LOCAL_ONLY) 20150403123207 plugins/added scripts/Pro_Feat_Fit.js
8d6c5209 (LOCAL_ONLY) 20150319172543 plugins/added
scripts/Profile_AlignRef.js
4f471c4a (LOCAL_ONLY) 20140802100606 plugins/added scripts/Reassign_ROIs_HS
channels.js
b5d7dea9 (LOCAL_ONLY) 20140915182716 plugins/added scripts/Reassign_ROIs_HS
to S.js
5dea0423 (LOCAL_ONLY) 20140619220039 plugins/added
scripts/Remove_Background_Median.js
ccc0dfcb (LOCAL_ONLY) 20140624222024 plugins/added scripts/SAM2_V2.js</pre>
</div>
</p>
<hr>
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<ul>
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