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<head>
<base href="http://fiji.sc/bugzilla/" />
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<body><table border="1" cellspacing="0" cellpadding="8">
<tr>
<th>Bug ID</th>
<td><a class="bz_bug_link
bz_status_NEW "
title="NEW - Fails to recognize different channels in TIFF file"
href="http://fiji.sc/bugzilla/show_bug.cgi?id=1072">1072</a>
</td>
</tr>
<tr>
<th>Summary</th>
<td>Fails to recognize different channels in TIFF file
</td>
</tr>
<tr>
<th>Product</th>
<td>Fiji
</td>
</tr>
<tr>
<th>Version</th>
<td>unspecified
</td>
</tr>
<tr>
<th>Hardware</th>
<td>Macintosh
</td>
</tr>
<tr>
<th>OS</th>
<td>Mac OS
</td>
</tr>
<tr>
<th>Status</th>
<td>NEW
</td>
</tr>
<tr>
<th>Severity</th>
<td>normal
</td>
</tr>
<tr>
<th>Priority</th>
<td>P4
</td>
</tr>
<tr>
<th>Component</th>
<td>Plugins
</td>
</tr>
<tr>
<th>Assignee</th>
<td>imagej-bugs@imagej.net
</td>
</tr>
<tr>
<th>Reporter</th>
<td>jstitlow@gmail.com
</td>
</tr>
<tr>
<th>CC</th>
<td>jstitlow@gmail.com
</td>
</tr></table>
<p>
<div>
<pre>I suspect this is similar to a previously fixed bug:
1.49m 24 November 2014
Fixed a bug that caused ImageJ to incorrectly read 3 and 4 channel 16-bit
planar TIFFs.
Happened after updating to version 2.0.0rc-30/1.49s
TIFF file is opened as a single stack instead of 4 separate channels.
Many thanks!
J
Information about your version of Java:
os.arch => x86_64
os.name => Mac OS X
os.version => 10.10.2
java.version => 1.6.0_65
java.vendor => Apple Inc.
java.runtime.name => Java(TM) SE Runtime Environment
java.runtime.version => 1.6.0_65-b14-466.1-11M4716
java.vm.name => Java HotSpot(TM) 64-Bit Server VM
java.vm.version => 20.65-b04-466.1
java.vm.vendor => Apple Inc.
java.vm.info => mixed mode
java.awt.graphicsenv => apple.awt.CGraphicsEnvironment
java.specification.name => Java Platform API Specification
java.specification.version => 1.6
sun.cpu.endian => little
sun.desktop => null
file.separator => /
The up-to-date check says: CHECK_TURNED_OFF
Information relevant to JAVA_HOME related problems:
JAVA_HOME is set to: null
imagej.dir => /Applications/Fiji.app
Information about the version of each plugin:
Activated update sites:
ImageJ: <a href="http://update.imagej.net/">http://update.imagej.net/</a> (last check:20150501194914)
Fiji: <a href="http://fiji.sc/update/">http://fiji.sc/update/</a> (last check:20150509234919)
GDSC: <a href="http://sites.imagej.net/GDSC/">http://sites.imagej.net/GDSC/</a> (last check:20150421144620)
Files not up-to-date:
6f9698ab (MODIFIED) 20150518184848 Contents/Info.plist
1ad3be0d (LOCAL_ONLY) 20140611184202 jars/jpedalSTD.jar
b3f81c9d (LOCAL_ONLY) 20150505002554 macros/FISH_FOCI.ijm
65cd0d4e (LOCAL_ONLY) 20141115142556 macros/Fluorescence.ijm
e7c1a0b1 (LOCAL_ONLY) 20141130013502 macros/Fluorescence_paricles.ijm
1d1902ff (LOCAL_ONLY) 20150406105527 macros/TranscriptionFoci.ijm
da46686b (LOCAL_ONLY) 20141130132708 macros/particlecounter.ijm
61fa7106 (LOCAL_ONLY) 20141130012659 plugins/Entropy_Threshold.class
404c9259 (LOCAL_ONLY) 20141130010600 plugins/ICTN_.jar
946ffba8 (LOCAL_ONLY) 20140801002555 plugins/MultipleKymograph_.class
54d2cdf2 (LOCAL_ONLY) 20140801002857 plugins/MultipleOverlay_.class
bee0253d (LOCAL_ONLY) 20141115122248 plugins/Normalize_.class
ccce92e9 (LOCAL_ONLY) 20081202184414 plugins/Nucleus_Counter.class
bf8660d2 (LOCAL_ONLY) 20140801002930 plugins/StackDifference_.class
203df37a (LOCAL_ONLY) 20140719221758 plugins/Time_Series_Analyzer.jar
d3721d57 (LOCAL_ONLY) 20140801002941 plugins/WalkingAverage_.class</pre>
</div>
</p>
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